prot_S-dermatodea_contig8519.16687.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig8519.16687.1
Unique Nameprot_S-dermatodea_contig8519.16687.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length66
Homology
BLAST of mRNA_S-dermatodea_contig8519.16687.1 vs. uniprot
Match: X2KU57_SCYLO (TypA/BipA GTP binding protein n=1 Tax=Scytosiphon lomentaria TaxID=27967 RepID=X2KU57_SCYLO)

HSP 1 Score: 134 bits (336), Expect = 4.870e-35
Identity = 65/66 (98.48%), Postives = 66/66 (100.00%), Query Frame = 0
Query:    1 QNCAIKYQGTKFNLVDTPGHADFGGEVERILNMVDGILLVVDSVEGPKPQTRFVLKKALELGLQAV 66
            +NCAIKYQGTKFNLVDTPGHADFGGEVERILNMVDGILLVVDSVEGPKPQTRFVLKKALELGLQAV
Sbjct:  136 KNCAIKYQGTKFNLVDTPGHADFGGEVERILNMVDGILLVVDSVEGPKPQTRFVLKKALELGLQAV 201          
BLAST of mRNA_S-dermatodea_contig8519.16687.1 vs. uniprot
Match: A0A836CE33_9STRA (PBipA, plastid GTPase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CE33_9STRA)

HSP 1 Score: 130 bits (327), Expect = 8.570e-34
Identity = 62/66 (93.94%), Postives = 65/66 (98.48%), Query Frame = 0
Query:    1 QNCAIKYQGTKFNLVDTPGHADFGGEVERILNMVDGILLVVDSVEGPKPQTRFVLKKALELGLQAV 66
            +NCAI+YQG KFNLVDTPGHADFGGEVERILNMVDG+LLVVDSVEGPKPQTRFVLKKALELGLQAV
Sbjct:  134 KNCAIRYQGVKFNLVDTPGHADFGGEVERILNMVDGVLLVVDSVEGPKPQTRFVLKKALELGLQAV 199          
BLAST of mRNA_S-dermatodea_contig8519.16687.1 vs. uniprot
Match: A0A7S3GZ45_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GZ45_9STRA)

HSP 1 Score: 116 bits (290), Expect = 6.220e-32
Identity = 53/66 (80.30%), Postives = 62/66 (93.94%), Query Frame = 0
Query:    1 QNCAIKYQGTKFNLVDTPGHADFGGEVERILNMVDGILLVVDSVEGPKPQTRFVLKKALELGLQAV 66
            +N AI Y+GTK N+VDTPGHADFGGEVERI+NMVDG+LLVVDSV+GPKPQTRFVLKKALE G++A+
Sbjct:   54 KNAAIMYKGTKINIVDTPGHADFGGEVERIMNMVDGVLLVVDSVDGPKPQTRFVLKKALEKGIRAI 119          
BLAST of mRNA_S-dermatodea_contig8519.16687.1 vs. uniprot
Match: T1BB85_9ZZZZ (Protein synthesis factor, GTP-binding domain protein (Fragment) n=1 Tax=mine drainage metagenome TaxID=410659 RepID=T1BB85_9ZZZZ)

HSP 1 Score: 112 bits (280), Expect = 1.380e-30
Identity = 49/66 (74.24%), Postives = 62/66 (93.94%), Query Frame = 0
Query:    1 QNCAIKYQGTKFNLVDTPGHADFGGEVERILNMVDGILLVVDSVEGPKPQTRFVLKKALELGLQAV 66
            +NCAI+Y+GT+ N+VDTPGHADFGGEVER+L+MVDG+LLVVD+V+GP PQTRFV +KAL LGL+A+
Sbjct:   59 KNCAIEYRGTRINIVDTPGHADFGGEVERVLSMVDGVLLVVDAVDGPMPQTRFVTRKALSLGLKAI 124          
BLAST of mRNA_S-dermatodea_contig8519.16687.1 vs. uniprot
Match: F0XW47_AURAN (Tr-type G domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XW47_AURAN)

HSP 1 Score: 121 bits (303), Expect = 1.530e-30
Identity = 57/66 (86.36%), Postives = 63/66 (95.45%), Query Frame = 0
Query:    1 QNCAIKYQGTKFNLVDTPGHADFGGEVERILNMVDGILLVVDSVEGPKPQTRFVLKKALELGLQAV 66
            +N A++Y+G K N+VDTPGHADFGGEVERILNMVDG+LLVVDSVEGPKPQTRFVLKKALELGLQAV
Sbjct:   99 KNAAVEYKGVKINVVDTPGHADFGGEVERILNMVDGVLLVVDSVEGPKPQTRFVLKKALELGLQAV 164          
BLAST of mRNA_S-dermatodea_contig8519.16687.1 vs. uniprot
Match: A0A6H5KYY6_9PHAE (Tr-type G domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KYY6_9PHAE)

HSP 1 Score: 120 bits (301), Expect = 3.130e-30
Identity = 60/66 (90.91%), Postives = 63/66 (95.45%), Query Frame = 0
Query:    1 QNCAIKYQGTKFNLVDTPGHADFGGEVERILNMVDGILLVVDSVEGPKPQTRFVLKKALELGLQAV 66
            +NCAIKY+ TKFNLVDTPGHADFGGEVERILNMVDGILLVVDS  GPKPQTRFVLKKAL+LGLQAV
Sbjct:  146 KNCAIKYEDTKFNLVDTPGHADFGGEVERILNMVDGILLVVDS--GPKPQTRFVLKKALDLGLQAV 209          
BLAST of mRNA_S-dermatodea_contig8519.16687.1 vs. uniprot
Match: A0A8J2WJI0_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WJI0_9STRA)

HSP 1 Score: 120 bits (300), Expect = 4.010e-30
Identity = 58/66 (87.88%), Postives = 62/66 (93.94%), Query Frame = 0
Query:    1 QNCAIKYQGTKFNLVDTPGHADFGGEVERILNMVDGILLVVDSVEGPKPQTRFVLKKALELGLQAV 66
            +N AI Y+G K NLVDTPGHADFGGEVERILNMVDG+LLVVDSVEGPKPQTRFVLKKALELGL+AV
Sbjct:  104 KNAAIDYKGVKVNLVDTPGHADFGGEVERILNMVDGVLLVVDSVEGPKPQTRFVLKKALELGLKAV 169          
BLAST of mRNA_S-dermatodea_contig8519.16687.1 vs. uniprot
Match: A0A0G4EBI8_VITBC (Tr-type G domain-containing protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4EBI8_VITBC)

HSP 1 Score: 118 bits (295), Expect = 2.020e-29
Identity = 56/66 (84.85%), Postives = 61/66 (92.42%), Query Frame = 0
Query:    1 QNCAIKYQGTKFNLVDTPGHADFGGEVERILNMVDGILLVVDSVEGPKPQTRFVLKKALELGLQAV 66
            +N AI Y+GTK NLVDTPGHADFGGEVERI+NMVDG+LLVVDSVEGPKPQTRFVLKKALE G +AV
Sbjct:  134 KNTAINYKGTKINLVDTPGHADFGGEVERIMNMVDGVLLVVDSVEGPKPQTRFVLKKALEAGCEAV 199          
BLAST of mRNA_S-dermatodea_contig8519.16687.1 vs. uniprot
Match: A0A7X7CX27_9BURK (GTP-binding protein (Fragment) n=1 Tax=Burkholderiaceae bacterium TaxID=2030806 RepID=A0A7X7CX27_9BURK)

HSP 1 Score: 108 bits (270), Expect = 2.090e-28
Identity = 47/66 (71.21%), Postives = 60/66 (90.91%), Query Frame = 0
Query:    1 QNCAIKYQGTKFNLVDTPGHADFGGEVERILNMVDGILLVVDSVEGPKPQTRFVLKKALELGLQAV 66
            +NCA++YQGT+ N+VDTPGHADFGGEVER L+MVDG+LL+VD+V+GP PQTRFV +KAL LGL+ +
Sbjct:   67 KNCAVEYQGTRINIVDTPGHADFGGEVERALSMVDGVLLLVDAVDGPMPQTRFVTRKALALGLRPI 132          
BLAST of mRNA_S-dermatodea_contig8519.16687.1 vs. uniprot
Match: A0A534TU16_9DELT (GTP-binding protein (Fragment) n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A534TU16_9DELT)

HSP 1 Score: 107 bits (268), Expect = 4.420e-28
Identity = 51/66 (77.27%), Postives = 57/66 (86.36%), Query Frame = 0
Query:    1 QNCAIKYQGTKFNLVDTPGHADFGGEVERILNMVDGILLVVDSVEGPKPQTRFVLKKALELGLQAV 66
            +N A+ Y+G K N+VDTPGHADFGGEVER L MVDGILL+VD+ EGP PQTRFVLKKALELGL AV
Sbjct:   75 KNTAVTYRGVKINIVDTPGHADFGGEVERTLTMVDGILLIVDASEGPLPQTRFVLKKALELGLPAV 140          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig8519.16687.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
X2KU57_SCYLO4.870e-3598.48TypA/BipA GTP binding protein n=1 Tax=Scytosiphon ... [more]
A0A836CE33_9STRA8.570e-3493.94PBipA, plastid GTPase n=1 Tax=Tribonema minus TaxI... [more]
A0A7S3GZ45_9STRA6.220e-3280.30Hypothetical protein (Fragment) n=1 Tax=Spumella e... [more]
T1BB85_9ZZZZ1.380e-3074.24Protein synthesis factor, GTP-binding domain prote... [more]
F0XW47_AURAN1.530e-3086.36Tr-type G domain-containing protein n=1 Tax=Aureoc... [more]
A0A6H5KYY6_9PHAE3.130e-3090.91Tr-type G domain-containing protein n=2 Tax=Ectoca... [more]
A0A8J2WJI0_9STRA4.010e-3087.88Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A0G4EBI8_VITBC2.020e-2984.85Tr-type G domain-containing protein n=2 Tax=Vitrel... [more]
A0A7X7CX27_9BURK2.090e-2871.21GTP-binding protein (Fragment) n=1 Tax=Burkholderi... [more]
A0A534TU16_9DELT4.420e-2877.27GTP-binding protein (Fragment) n=1 Tax=Deltaproteo... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.300coord: 1..66
e-value: 6.8E-21
score: 76.4
NoneNo IPR availablePANTHERPTHR42908FAMILY NOT NAMEDcoord: 2..65
IPR000795Transcription factor, GTP-binding domainPFAMPF00009GTP_EFTUcoord: 6..65
e-value: 5.7E-19
score: 68.4
IPR000795Transcription factor, GTP-binding domainPROSITEPS51722G_TR_2coord: 1..66
score: 22.383
IPR006298GTP-binding protein TypAPANTHERPTHR42908:SF8ELONGATION FACTOR FAMILY PROTEINcoord: 2..65
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 4..64

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig8519contigS-dermatodea_contig8519:4062..5127 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig8519.16687.1mRNA_S-dermatodea_contig8519.16687.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig8519 4062..5127 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig8519.16687.1 ID=prot_S-dermatodea_contig8519.16687.1|Name=mRNA_S-dermatodea_contig8519.16687.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=66bp
QNCAIKYQGTKFNLVDTPGHADFGGEVERILNMVDGILLVVDSVEGPKPQ
TRFVLKKALELGLQAV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000795TF_GTP-bd_dom
IPR006298TypA_GTP-bd
IPR027417P-loop_NTPase