prot_S-dermatodea_contig8513.16683.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig8513.16683.1
Unique Nameprot_S-dermatodea_contig8513.16683.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length860
Homology
BLAST of mRNA_S-dermatodea_contig8513.16683.1 vs. uniprot
Match: D7FYL3_ECTSI (MutS protein homolog 3 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYL3_ECTSI)

HSP 1 Score: 767 bits (1980), Expect = 9.450e-257
Identity = 504/779 (64.70%), Postives = 556/779 (71.37%), Query Frame = 0
Query:  153 VITADSFDLQENSGRREMFQAGVNATLCDGDQSKAEAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAAGGVKLTPMEQQVFDLKAQHPGVLLLVECGYRYRFFGEDALVAAKVLRIYAHMDHNFQVASVPTFRLAVHLRRLVDAGHKVGVVRQAESAALKAAGLTETGKKSGTFKRELAAVFTQATWMEGAVEALMPSSTSSTATTAGGGXXXXXXXXXXXXXXXXXXNAXXXXXXQGSWRKIGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESALSEAEMDAPVPQIDHERSEQWLLSVYEEDASRNAS-DSEPLSISLALMDGTTAGGADEVDAVRVGVIAVDVRTGRVVHDAFVEGSGQRQELDTRLRHLRPLELLAPGPRLSKATEATLARYCDSAVDARGDRRIVRTERLPPEEFCFDAAQTSLTEYYAKHKGXXXXXXXXXXXKGD--------APALTRVLDLARPEICALGPLMTHLQRFGLDRALATPDLVSFSQSRYMTLDAVTLRDLEV------------------------------------------------------------LQCQADGREAGSLFSVLDRTQTAFGRRVLAGWVRQPLLSPEDITARQDAVEEIATDAPPVMERLRPALRDLKDLDPAIASLHHRKIQPSRLLSLLGTMRKVFAVFHPPTGVAPSKNVRANGAD---AGGPTPEEQGSAKSRVLLEAIAGVPANMAMVIGRFLGELDAEAAA 859
            V +ADSF+L+E++ RR+ FQAG+ A L D         XXXXXXXXXXX       X XXXXXXXXXXXXXXXXXXXXXXXXXXX       VKLTPMEQQV DLKA+HPGVLLLVECGYRYRFFG+DAL AAKVLRIYAHMDHNFQVASVPTFRLAVHLRRLVDAG+KVGVVRQAESAALKAAGLTETGKKSGTFKRELAAVF+QATW+EGAVEALMPSS+ S   T G                            QGS+RKIGG              XXXXXXXXX              SEA+MDAP+PQ+DHERSEQWL+S+YEEDAS  AS + EPLSIS+AL DG   G   +V+ VRVG+IAVDVRTG+VVHDAF EGSGQRQEL TRLRHLRPLELL PGPRLSK TEAT+ARYC+SAVDARGDRR+VRTERLPPE+FCF+AAQ SL++YY K +G            G+        AP LTRVLDL RP ICALGPLMTHL+RFGLDR+LA+PDL SFS+S+YMTLDAVTLRDLEV                                                            LQCQADGREAGSLFS+LDRTQTAFGRRVLAGWVRQPLLSPEDITARQDAVEE+ TD P VMERLRP LRDLKDLDPAIASLHHR+IQP+RLLSLLGTMRKVF VFHPPT         A GAD     GP+ +++G  +S VLL+A+A VPANMA VI R+LGEL+AEAAA
Sbjct:  273 VFSADSFNLEEDARRRKDFQAGLRAALPDDSDDGPSVAXXXXXXXXXXXDNGAPGGXLXXXXXXXXXXXXXXXXXXXXXXXXXXXR------VKLTPMEQQVVDLKAKHPGVLLLVECGYRYRFFGDDALAAAKVLRIYAHMDHNFQVASVPTFRLAVHLRRLVDAGYKVGVVRQAESAALKAAGLTETGKKSGTFKRELAAVFSQATWVEGAVEALMPSSSGSNTGTGG-----------------RSGTDAGKSGGQGSFRKIGGAWRRVGGWGKKGGKXXXXXXXXXEDSDQPGEPQPP--SEADMDAPLPQLDHERSEQWLMSMYEEDASPGASTEGEPLSISIALNDGGGGGAEKQVERVRVGLIAVDVRTGKVVHDAFEEGSGQRQELHTRLRHLRPLELLLPGPRLSKETEATVARYCESAVDARGDRRVVRTERLPPEDFCFEAAQASLSKYYGKGRGSSKPDASEGEKDGNGXXGGDGCAPVLTRVLDLPRPAICALGPLMTHLERFGLDRSLASPDLSSFSKSQYMTLDAVTLRDLEVSTTVVLPRKDAIVFVAACCLVLSGVTSFSSLVPPGEVGGAEQKIGSWSTDSRAPEVIPSVLQCQADGREAGSLFSILDRTQTAFGRRVLAGWVRQPLLSPEDITARQDAVEELVTDPPSVMERLRPTLRDLKDLDPAIASLHHRRIQPNRLLSLLGTMRKVFGVFHPPT---------ARGADETEGAGPS-QQRGGPRSVVLLDALADVPANMAPVIARYLGELNAEAAA 1016          
BLAST of mRNA_S-dermatodea_contig8513.16683.1 vs. uniprot
Match: A0A6H5K2F4_9PHAE (DNA_MISMATCH_REPAIR_2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2F4_9PHAE)

HSP 1 Score: 239 bits (611), Expect = 2.950e-66
Identity = 128/169 (75.74%), Postives = 140/169 (82.84%), Query Frame = 0
Query:  691 VLQCQADGREAGSLFSVLDRTQTAFGRRVLAGWVRQPLLSPEDITARQDAVEEIATDAPPVMERLRPALRDLKDLDPAIASLHHRKIQPSRLLSLLGTMRKVFAVFHPPTGVAPSKNVRANGADAGGPTPEEQGSAKSRVLLEAIAGVPANMAMVIGRFLGELDAEAAA 859
            VLQCQADGREAGSLFS+LDRTQTAFGRRVLAGWVRQPLLSPEDITARQDAVEE+  D P VMERLRPALRDLKDLDPA ASLHHR+IQPSRLLSLLGTMRKVF +FHPPT       VR      G  + ++ G  +S VLL+A+A VPANMA VI R+LGEL+AEAAA
Sbjct:    2 VLQCQADGREAGSLFSILDRTQTAFGRRVLAGWVRQPLLSPEDITARQDAVEELVADPPSVMERLRPALRDLKDLDPATASLHHRRIQPSRLLSLLGTMRKVFGIFHPPT-------VRGADKTEGAGSSQQGGGPRSAVLLDALADVPANMAPVIARYLGELNAEAAA 163          
BLAST of mRNA_S-dermatodea_contig8513.16683.1 vs. uniprot
Match: UPI000B4EEBEF (DNA mismatch repair protein Msh3 isoform X1 n=2 Tax=Meriones unguiculatus TaxID=10047 RepID=UPI000B4EEBEF)

HSP 1 Score: 240 bits (613), Expect = 8.250e-63
Identity = 177/531 (33.33%), Postives = 259/531 (48.78%), Query Frame = 0
Query:  248 TPMEQQVFDLKAQHPGVLLLVECGYRYRFFGEDALVAAKVLRIYAHMDHNFQVASVPTFRLAVHLRRLVDAGHKVGVVRQAESAALKAAGLTETGKKSGTFKRELAAVFTQATWMEGAVEALMPSSTSSTATTAGGGXXXXXXXXXXXXXXXXXXNAXXXXXXQGSWRKIGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESALSEAEMDAPVPQIDHERSEQWLLSVYEEDASRNASDSEPLSISLALMDGTTAGGADEVDAVRVGVIAVDVRTGRVVHDAFVEGSGQRQELDTRLRHLRPLELLAPGPRLSKATEATLARYCDSAVDARGDRRIVRTERLPPEEFCFDAAQTSLTEYYAKHKGXXXXXXXXXXXKGDAPALTRVLDLARPEICALGPLMTHLQRFGLDRALATPDLVSFSQSR--YMTLDAVTLRDLEVLQCQADGREAGSLFSVLDRTQTAFGRRVLAGWVRQPLLSPEDITARQDAVEEIATDAPPVMERLRPALRDLKDLDPAIASLHHRK 776
            TP+E Q  D+K QH   +L VECGY+YRFFGEDA +AA+ L IY H+DHNF  AS+PT RL VH+RRLV  G+KVGVV+Q E+AALKA G      KS  F R+L A++T++T +   V  ++                                                                                     L +      + ++  + S  +LL +YEE    N  D +  +IS+                   G++     TG VV D F + S  RQEL+TRL  L+P+ELL P   LS+ TE  + R   +AV  R DR  +R ER+    F + +A  ++TE+YA+              +G + + + V++L +P IC+L  ++ +L+ F L++ L+ P+      SR  +M ++  TLR+LE+LQ Q D +  GSLF VLD T+T+FGRR L  WV QPLL   DI AR DAV ++      V +++   LR L D++  + S++H+K
Sbjct:  188 TPLELQYIDMKQQHKDAILCVECGYKYRFFGEDAEIAARELNIYCHLDHNFMTASIPTHRLFVHVRRLVAKGYKVGVVKQTETAALKAIG----DNKSSVFSRKLTALYTKSTLIGEDVNPVI------------------------------------------------------------------------------------RLHDC---VNIDEVMADTSTNYLLCIYEE--KENIKDKKKGNISI-------------------GIVGAQPATGEVVFDCF-QDSASRQELETRLLSLQPVELLLPSD-LSQPTEMLIHRA--TAVSVRDDR--IRVERMSNTYFEYSSAFQTVTEFYARKA---------VDWQG-SQSFSGVINLEKPVICSLAAIIRYLKEFNLEKILSKPENFKQLSSRMEFMRINGTTLRNLELLQNQTDLKTKGSLFWVLDHTKTSFGRRKLKKWVTQPLLQLRDINARLDAVSDVLHSESSVFDQIENRLRKLPDIERGLCSIYHKK 590          
BLAST of mRNA_S-dermatodea_contig8513.16683.1 vs. uniprot
Match: A0A8C2YM35_CHILA (MutS homolog 3 n=2 Tax=Chinchilla lanigera TaxID=34839 RepID=A0A8C2YM35_CHILA)

HSP 1 Score: 234 bits (597), Expect = 1.430e-60
Identity = 179/544 (32.90%), Postives = 262/544 (48.16%), Query Frame = 0
Query:  248 TPMEQQVFDLKAQHPGVLLLVECGYRYRFFGEDALVAAKVLRIYAHMDHNFQVASVPTFRLAVHLRRLVDAGHKVGVVRQAESAALKAAGLTETGKKSGTFKRELAAVFTQATWMEGAVEALMPSSTSSTATTAGGGXXXXXXXXXXXXXXXXXXNAXXXXXXQGSWRKIGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESALSEAEMDAPVPQIDHERSEQWLLSVYEEDASRNASDSEPLSISLALMDGTTAGGADEVDAVRVGVIAVDVRTGRVVHDAFVEGSGQRQELDTRLRHLRPLELLAPGPRLSKATEATLARYCDSAVDARGDRRIVRTERLPPEEFCFDAAQTSLTEYYAKHKGXXXXXXXXXXXKGDAPALTRVLDLARPEICALGPLMTHLQRFGLDRALATPDLVS--FSQSRYMTLDAVTLRDLEVLQCQADGREAGSLFSVLDRTQTAFGRRVLAGWVRQPLLSPEDITARQDAVEEIATDAPPVMERLRPALRDLKDLDPAIASLHHRKIQPSRLLSLLGTM 789
            TP+E Q  ++K QHP  +L VECGY+YRFFGEDA +AA+ L IY H+DH+F  ASVPT RL VH+RRLV  G+KVGVV+Q E+AALKAAG      +   F R+L A++T++T +   V  L+                                                                                  + A+S       V +I  + S  +LL + E+       D E  S+S+                   G++AV   TG V+ D F + +  R EL+TR+R L+P ELL P   LS+ TEA + R   + V  R DR  +R ER+    F    A   +TE+YAK              +G + + + +++L +P IC L  ++ +L+ F L++ L+ P+      S+  +MT++  TLR+LE+LQ Q DG++ GSL  VLD T+TAFGRR L  WV QPLL   +I AR DAV E+      V  +L   L+ L D++  + S++H+K        ++ T+
Sbjct:  271 TPLELQYLEVKRQHPDAVLCVECGYKYRFFGEDAEIAARELNIYCHLDHSFMTASVPTHRLFVHVRRLVAKGYKVGVVKQTETAALKAAG----ENRGSVFARKLTALYTKSTLIGEDVNPLVK--------------------------------------------------------------------------------LDDAVS-------VDEITTDTSTGYLLCICED--KEGVKDRERGSVSM-------------------GLVAVQPATGEVLLDGFCDAA-PRLELETRVRSLQPAELLLPQC-LSEPTEALVRRAATAGV--RDDR--IRVERMDNVYFEHSHAFQVVTEFYAKDP---------VDVRG-SQSFSDIINLEKPVICCLAAIIRYLKEFNLEKILSKPENFKQLSSEMVFMTMNGTTLRNLEILQNQTDGKKRGSLLWVLDHTKTAFGRRELKKWVTQPLLKLSEINARLDAVSEVLHSESSVFGQLESQLQKLPDIERGLGSIYHKKCSTQEFFLIVKTL 686          
BLAST of mRNA_S-dermatodea_contig8513.16683.1 vs. uniprot
Match: UPI0018D93EAD (DNA mismatch repair protein Msh3-like n=1 Tax=Patiria miniata TaxID=46514 RepID=UPI0018D93EAD)

HSP 1 Score: 233 bits (595), Expect = 2.390e-60
Identity = 181/563 (32.15%), Postives = 266/563 (47.25%), Query Frame = 0
Query:  240 GAAGGVKLTPMEQQVFDLKAQHPGVLLLVECGYRYRFFGEDALVAAKVLRIYAHMDHNFQVASVPTFRLAVHLRRLVDAGHKVGVVRQAESAALKAAGLTETGKKSGTFKRELAAVFTQATWMEGAVEALMPSSTSSTATTAGGGXXXXXXXXXXXXXXXXXXNAXXXXXXQGSWRKIGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESALSEAEMDAPVPQIDHERSEQWLLSVYE-----EDASRNASDSEPLSISLALMDGTTAGGADEVDAVRVGVIAVDVRTGRVVHDAFVEGSGQRQELDTRLRHLRPLELLAPGPRLSKATEATLARYCDSAVDARGDRRIVRTERLPPEEFCFDAAQTSLTEYYA-KHKGXXXXXXXXXXXKGDAP--ALTRVLDLARPEICALGPLMTHLQRFGLDRALA-TPDLVSFS-QSRYMTLDAVTLRDLEVLQCQADGREAGSLFSVLDRTQTAFGRRVLAGWVRQPLLSPEDITARQDAVEEIATDAPPVMERLRPALRDLKDLDPAIASLHHRKIQPSRLLSLLGTMRKV 792
            G   GVK TP+E Q  ++K Q+P  LL VECGY+Y+FFG+DA +AAK L I+ H DHNF VAS+P  RL VH RRLV  GHKVGVV+Q E+AALKAAG      +S  F+R+L+A++T++T +   V+ ++ S  S                                                                                 ++ E+ + VP         +LL + E       A +NAS                         V  GV+A+   TG +++D+F +      ELDTR+ H++P+ELL P   L++ TE  +     S+     DR  +R ER+  E F +  A   +T +Y+ + +            + D     L  V++L  P IC L  L+ +L+ F L R L  T +LVSFS +++ M LDA  LR+LE+ + Q DG   GSLF VLD T+T FG R+L  W+  PL+   +I  RQDAVEE+       M R R  L  + DL+  I S++H+K   +   +++ ++ K+
Sbjct:  233 GPLRGVKYTPLELQFLEIKKQYPDALLFVECGYKYKFFGQDAEIAAKELNIFCHPDHNFMVASIPVHRLFVHTRRLVAKGHKVGVVKQTETAALKAAG----DNRSAPFQRKLSALYTKSTLIGEDVDPVIGSLASDP-------------------------------------------------------------------------------TDGEVSSVVPS-------NYLLCLSEFTKPSSKARKNAS-------------------------VEFGVVAIQPATGDIIYDSFHDND-HLSELDTRIHHIQPVELLLPTV-LTEKTEKLVQDIVSSST-TEDDR--IRIERMDNEHFDYSEALDVVTAFYSLEDERDEEQETEKWKQRRDCANRKLQEVINLPVPVICCLAALLRYLKEFNLHRVLKMTSNLVSFSARNQCMKLDACALRNLEIFKNQTDGSGRGSLFWVLDHTKTRFGSRLLRKWLAMPLMELSNIQCRQDAVEELMHSDCEAMSRARDLLSKVPDLEKGICSIYHKKCSSAEFYTVVKSLSKL 675          
BLAST of mRNA_S-dermatodea_contig8513.16683.1 vs. uniprot
Match: A0A0D2USV4_CAPO3 (DNA mismatch repair protein n=1 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2USV4_CAPO3)

HSP 1 Score: 233 bits (594), Expect = 4.200e-60
Identity = 181/595 (30.42%), Postives = 269/595 (45.21%), Query Frame = 0
Query:  241 AAGGVK----LTPMEQQVFDLKAQHPGVLLLVECGYRYRFFGEDALVAAKVLRIYAHMDHNFQVASVPTFRLAVHLRRLVDAGHKVGVVRQAESAALKAAGLTETGKKSGTFKRELAAVFTQATWMEGAVEALMPSSTSSTATTAGGGXXXXXXXXXXXXXXXXXXNAXXXXXXQGSWRKIGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESALSEAEMDAPVPQIDHERSEQWLLSVYEEDASRNASDSEPLSISLALMDGTTAGGADEVDAVRVGVIAVDVRTGRVVHDAFVEGSGQRQELDTRLRHLRPLELLAPGPRLSKATEATLARYCDSAVDARGDRRIVRTERLPPEEFCFDAAQTSLTEYYA--------------------------KHKGXXXXXXXXXXXKGDAPALTRVLDLARPEICALGPLMTHLQRFGLDRALA-TPDLVSFSQSRYMTLDAVTLRDLEVLQCQADGREAGSLFSVLDRTQTAFGRRVLAGWVRQPLLSPEDITARQDAVEEIATDAPPVMERLRPALRDLKDLDPAIASLHHRKIQPSRLLSLLGTMRKVFAVFH---PPTG 801
            AAG  K     T +EQQ  D+K QHP  +L VECGY++RFFG+DA +AAK L I     HNF  AS+PT RL VH++RLV+ G+KVGVVRQ E+AALKAAG      KS  F R+L  ++T+AT +   +EA   S+   T ++                                                                                               +L+S++E  A+ N++        LA  +  +   +    A R+ ++AV   TG +++D F +G   R EL+TRL HLRP EL+ P  +LS  TE  +A        +  +   +R ERLP  +F + +A + +T ++                           +H                A AL  VL+L++  +   G L+ +L  FGLD+ L  T +L  F Q  +M L+ +TL +LEV + + DG   G+LF++L+ T T FGRR+L  W+ QPLL    I  RQDA+EE+ T   P+  + +  L+ + DLD  +  ++++K  PS  L LL    ++   F    PP G
Sbjct:  299 AAGNKKAKSPFTQLEQQYIDVKVQHPDAVLFVECGYKFRFFGDDAEIAAKELSIGCFPSHNFMTASIPTHRLPVHVKRLVNLGYKVGVVRQTETAALKAAG----DNKSAPFDRKLTGLYTRATLIGDDIEAENDSAEDETGSS----------------------------------------------------------------------------------------------HYLMSIFELVAADNSA--------LAAAERHS---SPLTPATRIAIVAVRPSTGDIIYDEFSDGL-TRSELETRLAHLRPTELILPM-QLSTRTEQLIAALAYGGGRSEAE---IRLERLPVAQFDYQSAVSDITRFFTASRTKSEAHLRSKSSSHSASEHESSDEHATLMEIDGQATSTTDGAAALNLVLNLSQGIVRCFGALLRYLSDFGLDQVLLLTSNLHHFHQRNHMLLNGLTLSNLEVFRNETDGGSTGTLFALLNHTVTPFGRRLLRTWIAQPLLDRSAILNRQDAIEELLTSEAPMFAKTKKMLQSVGDLDKGLCRIYYQKCSPSEFLMLLHAFNRMSGEFRFWCPPEG 779          
BLAST of mRNA_S-dermatodea_contig8513.16683.1 vs. uniprot
Match: A0A8H7Q3L1_9FUNG (DNA_MISMATCH_REPAIR_2 domain-containing protein n=1 Tax=Umbelopsis vinacea TaxID=44442 RepID=A0A8H7Q3L1_9FUNG)

HSP 1 Score: 230 bits (587), Expect = 1.420e-59
Identity = 181/566 (31.98%), Postives = 265/566 (46.82%), Query Frame = 0
Query:  248 TPMEQQVFDLKAQHPGVLLLVECGYRYRFFGEDALVAAKVLRIYAHMDHNFQVASVPTFRLAVHLRRLVDAGHKVGVVRQAESAALKAAGLTETGKKSGTFKRELAAVFTQATWMEGAVEALMPSSTSSTATTAGGGXXXXXXXXXXXXXXXXXXNAXXXXXXQGSWRKIGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESALSEAEMDAPVPQIDHERSEQWLLSVYEEDASRNASDSEPLSISLALMDGTTAGGADEVDAVRVGVIAVDVRTGRVVHDAFVEGSGQRQELDTRLRHLRPLELLAPGPRLSKATEATLARYCDSAVDARGDRRIVRTERLPPEEFC---FDAAQTSLTEYYAKHKGXXXXXXXXXXXKGDAPALTRVLDLAR-PEIC--ALGPLMTHLQRFGLDRALA-TPDLVSFSQSRYMTLDAVTLRDLEVLQCQADGREAGSLFSVLDRTQTAFGRRVLAGWVRQPLLSPEDITARQDAVEEIATDAPPVMERLRPALRDLKDLDPAIASLHHRKIQPSRLLSLLGTMRKVFAVFHPPTGVAPSK 806
            TP+E QV +LK ++PGVLL++E GY+Y+FFGEDA  A+K+L I  +MDHNF  AS+PT RL  H+RRLV+AGHKVGVVRQ E+AALKA G      K G F REL  ++T+ T++E   E         + T+ G G                                                                                           +L+ + EE+                       GG DE   VRVG++AV   TG +V+D+F E +  R EL+TR+ H++P ELL P   LS+ TE  +         A GD   VR ER+P +      ++AA T ++++YA   G           +GD  + T   ++ R PE+   +L   + +L  F LD     T     FS   +MTL+A T+ +LE+ +   +  E  SLF +L+ T T+FG+R+L  WV +PL++   +  R +AVEE+ +   P + ++R  L+ L DL+  +  +H+ K  PS LL +L  + KV  +FH    VA  K
Sbjct:  130 TPLEVQVVELKEKYPGVLLVIEVGYKYKFFGEDAKTASKILNIAHYMDHNFYCASIPTHRLPFHVRRLVNAGHKVGVVRQTETAALKAVG----DNKQGPFLRELRNLYTKGTFVE---EMAAADIEGDSGTSPGSGSN-----------------------------------------------------------------------------------------YLMCIVEENRG--------------------GGGPDE--RVRVGIVAVQPATGDIVYDSF-EDTYMRSELETRVLHIQPCELLLPAT-LSRPTEKLIQHIALQRTTAFGDN--VRVERIPKDMVFATDYNAAFTYVSDFYANATGSQSSS------QGDVKSETLFAEILRLPEVIIKSLALTVKYLTDFQLDHVFKLTKYFNHFSSKSHMTLNANTMANLEIYRNSTNYGEKHSLFWILNHTNTSFGKRLLKRWVGRPLINKGLLEERTNAVEELISTDNPKVPKIRSLLKHLPDLEKGLCRIHYGKSSPSELLQVLNALEKVAELFHQAAPVADIK 567          
BLAST of mRNA_S-dermatodea_contig8513.16683.1 vs. uniprot
Match: UPI0014552CDD (DNA mismatch repair protein Msh3-like n=1 Tax=Asterias rubens TaxID=7604 RepID=UPI0014552CDD)

HSP 1 Score: 230 bits (586), Expect = 3.690e-59
Identity = 175/552 (31.70%), Postives = 253/552 (45.83%), Query Frame = 0
Query:  245 VKLTPMEQQVFDLKAQHPGVLLLVECGYRYRFFGEDALVAAKVLRIYAHMDHNFQVASVPTFRLAVHLRRLVDAGHKVGVVRQAESAALKAAGLTETGKKSGTFKRELAAVFTQATWMEGAVEALMPSSTSSTATTAGGGXXXXXXXXXXXXXXXXXXNAXXXXXXQGSWRKIGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESALSEAEMDAPVPQIDHERSEQWLLSVYEEDASRNASDSEPLSISLALMDGTTAGGAD-EVDAVRVGVIAVDVRTGRVVHDAFVEGSGQRQELDTRLRHLRPLELLAPGPRLSKATEATLARYCDSAVDARGDRRIVRTERLPPEEFCFDAAQTSLTEYYAKHKGXXXXXXXXXXXK-GDAPALTRVLDLARPEICALGPLMTHLQRFGLDRALA-TPDLVSFS-QSRYMTLDAVTLRDLEVLQCQADGREAGSLFSVLDRTQTAFGRRVLAGWVRQPLLSPEDITARQDAVEEIATDAPPVMERLRPALRDLKDLDPAIASLHHRKIQPSRLLSLLGTMRKV 792
            VK TP+E Q  ++K QHP  LL VECGYRYRFFGEDA +AAK L I+ H+DHNF VAS+P +RL VH RRLV  GHKVGVV+Q E+AALKAAG      K   F+R+L A++T++T +   V+ +                                                                                    S   E EM + +                            P +  L   + T  G A  + D +  G++A+   TG +++D+F + S    ELDTRL+H++P+ELL P     K  +        S  D   D RI R ER+    F +  A   ++ +Y +              K      L  +++L  P IC L  L+ +L+ F L R L    +LVSFS +S++M LDA  LR+LE+ + Q DG   GSL  VL+ T+T FG R+L  W+  PL+S  DI  RQDAV+E+       + + +  L  L DL+  I S++H+K   +   +++ ++ K+
Sbjct:  264 VKYTPLELQFIEIKRQHPDTLLFVECGYRYRFFGEDAEIAAKELNIFCHLDHNFMVASIPVYRLFVHTRRLVSKGHKVGVVKQTETAALKAAG----ENKGAPFERKLTALYTKSTLIGEDVDPV------------------------------------------------------------------------------------SGDPECEMSSAIA---------------------------PTNYLLCFSEFTKPGKAKVKKDQLEFGLVAIQPATGDIIYDSFHDNS-HLSELDTRLQHIQPVELLLPSLMSDKTEKFIRDMVSSSTTD---DDRI-RIERMENGHFEYTQALEIISAFYGEGDVASGSKEKAASGKLNQGRRLQEMINLPVPVICCLAALLAYLKEFQLHRVLKMASNLVSFSARSKFMKLDAYALRNLEIFKNQTDGSVKGSLLWVLNHTKTRFGGRLLRKWLATPLMSLGDIQTRQDAVKELIESDCEALTQAKDLLARLPDLEKGICSIYHKKCSSAEFYTVVKSLSKL 695          
BLAST of mRNA_S-dermatodea_contig8513.16683.1 vs. uniprot
Match: A0A3P8TLM4_AMPPE (DNA mismatch repair protein n=1 Tax=Amphiprion percula TaxID=161767 RepID=A0A3P8TLM4_AMPPE)

HSP 1 Score: 228 bits (582), Expect = 8.770e-59
Identity = 175/533 (32.83%), Postives = 249/533 (46.72%), Query Frame = 0
Query:  248 TPMEQQVFDLKAQHPGVLLLVECGYRYRFFGEDALVAAKVLRIYAHMDHNFQVASVPTFRLAVHLRRLVDAGHKVGVVRQAESAALKAAGLTETGKKSGTFKRELAAVFTQATWMEGAVEALMPSSTSSTATTAGGGXXXXXXXXXXXXXXXXXXNAXXXXXXQGSWRKIGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESALSEAEMDAPVPQIDHERSEQWLLSVYEEDASRNASDSEPLSISLALMDGTTAGGADEVDAVRVGVIAVDVRTGRVVHDAFVEGSGQRQELDTRLRHLRPLELLAPGPRLSKATEATLARYCDSAVDARGDRRIVRTERLPPEEFCFDAAQTSLTEYYAKHKGXXXXXXXXXXXKGDAPALTRVLDLARPEICALGPLMTHLQRFGLDRALATPDLVSFS----QSRYMTLDAVTLRDLEVLQCQADGREAGSLFSVLDRTQTAFGRRVLAGWVRQPLLSPEDITARQDAVEEIATDAPPVMERLRPALRDLKDLDPAIASLHHRK 776
            TP+EQQV  LK QH   LL VECGY+YRFFGEDA +AAK L I  H+DHNF   S+PT RL VH+RRLV  GHKVGVV+Q E++A+KA+G      ++  F R+L+A++T++T +   V  +                                                                                   E    +  +D P           +LL + E        + + L   L                  VG++AV   TG V+ D F +GS  R EL+ R+  + P+E+L P   +S+ T+  L    +++  A  DR  VR E+    +F F +A  ++TE+Y   +G           KG   +L+ V  L  P IC LGPL+ +LQ F L+R L +    SF     +S  ++L+A TLR+LE+L  Q DG   GSL  VLD T+T FG+R++  WV QPL  P+ I+ RQDAV+EI       +  +R  L  L DL+  I S++H+K
Sbjct:  198 TPLEQQVIQLKQQHKDALLAVECGYKYRFFGEDAEIAAKELNIVCHLDHNFMTCSIPTHRLFVHVRRLVSHGHKVGVVKQTETSAIKASG----ANRNSLFTRQLSALYTKSTLVGEDVNPVC----------------------------------------------------------------------------RLEDVVEGGCGDVVLDPP---------NSFLLCISE--------NWDKLKKQLT-----------------VGLVAVQPSTGDVLLDCFPDGSS-RSELEGRILKINPVEILVPSD-ISEQTQRLLLSIANASAQA-DDR--VRVEKRDSAQFEFASAMNTVTEFYCHAQG-----------KGSR-SLSSVASLESPVICCLGPLIQYLQEFSLERVLRSES--SFRRLSCESEGLSLNAATLRNLEILNNQTDGGVKGSLLWVLDHTRTPFGKRLMRKWVSQPLTDPQSISERQDAVQEILQSDSLTLNSVRSLLSHLPDLERGICSIYHKK 597          
BLAST of mRNA_S-dermatodea_contig8513.16683.1 vs. uniprot
Match: UPI00165A4082 (DNA mismatch repair protein Msh3 n=1 Tax=Fundulus heteroclitus TaxID=8078 RepID=UPI00165A4082)

HSP 1 Score: 228 bits (582), Expect = 9.880e-59
Identity = 175/531 (32.96%), Postives = 245/531 (46.14%), Query Frame = 0
Query:  248 TPMEQQVFDLKAQHPGVLLLVECGYRYRFFGEDALVAAKVLRIYAHMDHNFQVASVPTFRLAVHLRRLVDAGHKVGVVRQAESAALKAAGLTETGKKSGTFKRELAAVFTQATWMEGAVEALMPSSTSSTATTAGGGXXXXXXXXXXXXXXXXXXNAXXXXXXQGSWRKIGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESALSEAEMDAPVPQIDHERSEQWLLSVYEEDASRNASDSEPLSISLALMDGTTAGGADEVDAVRVGVIAVDVRTGRVVHDAFVEGSGQRQELDTRLRHLRPLELLAPGPRLSKATEATLARYCDSAVDARGDRRIVRTERLPPEEFCFDAAQTSLTEYYAKHKGXXXXXXXXXXXKGDAPALTRVLDLARPEICALGPLMTHLQRFGLDRALATPDLVS--FSQSRYMTLDAVTLRDLEVLQCQADGREAGSLFSVLDRTQTAFGRRVLAGWVRQPLLSPEDITARQDAVEEIATDAPPVMERLRPALRDLKDLDPAIASLHHRK 776
            TP+EQQV +LK QH   LL VECGY+YRFFGEDA +AAK L I  H+DHNF   S+PT RL VH+RRLV  GHKVGVV+Q E++ALKA+G      ++  F R+L+A++T++T        L+    +     A                                                                       E   ++   D P         + +LL + E        + + L   L+                 VGV+AV   TG V  D F +G   R EL++R+  + P+E+L P   LS+ T   L    +++  A  D RI R ER    EF F +A  ++ ++Y                + D+ +L+ V     P IC LGPL+ +LQ F L+R L           +S  M+L A T+R+LE+L  Q DG   GSL  VLD T+TAFGRR+L  WV QPL+ P+ I+ RQDAV+E+       +  +R  L  L DL+  I S++H K
Sbjct:  225 TPLEQQVMELKQQHKDALLAVECGYKYRFFGEDAEIAAKELNITCHLDHNFMTCSIPTHRLFVHVRRLVSQGHKVGVVKQTETSALKASGTN----RNALFSRQLSALYTKST--------LVGEDVNPVCRMA--------------------------------------------------------------------DVEEGGFADVVSDPP---------DSFLLCISE--------NWDKLKKQLS-----------------VGVVAVQPSTGDVFLDCFPDGPS-RSELESRILKINPVEVLVPSD-LSEQTSKLLLSIANASAQA--DDRI-RVERRDSAEFEFTSAMNTVVKFYCH------------TPEKDSRSLSTVASFESPVICCLGPLIQYLQEFNLERVLRNESFFRQLSCESGGMSLSAATIRNLEILNNQTDGSVRGSLLWVLDHTRTAFGRRLLRKWVSQPLMEPQCISERQDAVQEMIESDSLTLNSIRSLLSHLPDLERGICSIYHGK 624          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig8513.16683.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FYL3_ECTSI9.450e-25764.70MutS protein homolog 3 n=1 Tax=Ectocarpus siliculo... [more]
A0A6H5K2F4_9PHAE2.950e-6675.74DNA_MISMATCH_REPAIR_2 domain-containing protein n=... [more]
UPI000B4EEBEF8.250e-6333.33DNA mismatch repair protein Msh3 isoform X1 n=2 Ta... [more]
A0A8C2YM35_CHILA1.430e-6032.90MutS homolog 3 n=2 Tax=Chinchilla lanigera TaxID=3... [more]
UPI0018D93EAD2.390e-6032.15DNA mismatch repair protein Msh3-like n=1 Tax=Pati... [more]
A0A0D2USV4_CAPO34.200e-6030.42DNA mismatch repair protein n=1 Tax=Capsaspora owc... [more]
A0A8H7Q3L1_9FUNG1.420e-5931.98DNA_MISMATCH_REPAIR_2 domain-containing protein n=... [more]
UPI0014552CDD3.690e-5931.70DNA mismatch repair protein Msh3-like n=1 Tax=Aste... [more]
A0A3P8TLM4_AMPPE8.770e-5932.83DNA mismatch repair protein n=1 Tax=Amphiprion per... [more]
UPI00165A40829.880e-5932.96DNA mismatch repair protein Msh3 n=1 Tax=Fundulus ... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007695DNA mismatch repair protein MutS-like, N-terminalPFAMPF01624MutS_Icoord: 248..363
e-value: 1.7E-26
score: 92.7
NoneNo IPR availableGENE3D1.10.1420.10coord: 678..811
e-value: 4.7E-34
score: 120.1
NoneNo IPR availablePANTHERPTHR11361:SF122DNA MISMATCH REPAIR PROTEIN MSH3coord: 228..366
NoneNo IPR availablePANTHERPTHR11361:SF122DNA MISMATCH REPAIR PROTEIN MSH3coord: 471..859
NoneNo IPR availablePANTHERPTHR11361DNA MISMATCH REPAIR PROTEIN MUTS FAMILY MEMBERcoord: 471..859
NoneNo IPR availablePANTHERPTHR11361DNA MISMATCH REPAIR PROTEIN MUTS FAMILY MEMBERcoord: 228..366
IPR007696DNA mismatch repair protein MutS, corePFAMPF05192MutS_IIIcoord: 685..791
e-value: 1.8E-24
score: 87.0
IPR007860DNA mismatch repair protein MutS, connector domainPFAMPF05188MutS_IIcoord: 514..664
e-value: 1.7E-9
score: 38.1
IPR036678MutS, connector domain superfamilyGENE3D3.30.420.110coord: 470..676
e-value: 2.5E-30
score: 107.7
IPR016151DNA mismatch repair protein MutS, N-terminalGENE3D3.40.1170.10coord: 239..379
e-value: 4.4E-45
score: 154.7
IPR016151DNA mismatch repair protein MutS, N-terminalSUPERFAMILY55271DNA repair protein MutS, domain Icoord: 244..360
IPR036187DNA mismatch repair protein MutS, core domain superfamilySUPERFAMILY48334DNA repair protein MutS, domain IIIcoord: 682..796

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig8513contigS-dermatodea_contig8513:1969..8681 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig8513.16683.1mRNA_S-dermatodea_contig8513.16683.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig8513 1969..8681 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig8513.16683.1 ID=prot_S-dermatodea_contig8513.16683.1|Name=mRNA_S-dermatodea_contig8513.16683.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=860bp
RQEIEICSSDGGVDDSASGDNNGDGDDSDFEDVPIGRDRKRAKKATSVDE
PKPSPSRTRTESEKSPPGNRTERPTGGRSESDGSGGRAARETPPPPGAVD
VEELLTEADQVTQASNPFSLSVAGRSSRGSCGGSSGGSTAAARTAAAAAA
EVVITADSFDLQENSGRREMFQAGVNATLCDGDQSKAEAGGRGGGGGRNG
SAGRGEGDASGPSPTGESTSKASPSLGKGKGKGKGKGKGGAAGGVKLTPM
EQQVFDLKAQHPGVLLLVECGYRYRFFGEDALVAAKVLRIYAHMDHNFQV
ASVPTFRLAVHLRRLVDAGHKVGVVRQAESAALKAAGLTETGKKSGTFKR
ELAAVFTQATWMEGAVEALMPSSTSSTATTAGGGANNGASGGGSGGGGGG
GGNAGGKGGGQGSWRKIGGAWRRMGGWGKGGRGVGAGGADENGGGAKEKK
EGESALSEAEMDAPVPQIDHERSEQWLLSVYEEDASRNASDSEPLSISLA
LMDGTTAGGADEVDAVRVGVIAVDVRTGRVVHDAFVEGSGQRQELDTRLR
HLRPLELLAPGPRLSKATEATLARYCDSAVDARGDRRIVRTERLPPEEFC
FDAAQTSLTEYYAKHKGKGRAAAAGAGGKGDAPALTRVLDLARPEICALG
PLMTHLQRFGLDRALATPDLVSFSQSRYMTLDAVTLRDLEVLQCQADGRE
AGSLFSVLDRTQTAFGRRVLAGWVRQPLLSPEDITARQDAVEEIATDAPP
VMERLRPALRDLKDLDPAIASLHHRKIQPSRLLSLLGTMRKVFAVFHPPT
GVAPSKNVRANGADAGGPTPEEQGSAKSRVLLEAIAGVPANMAMVIGRFL
GELDAEAAAA
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007695DNA_mismatch_repair_MutS-lik_N
IPR007696DNA_mismatch_repair_MutS_core
IPR007860DNA_mmatch_repair_MutS_con_dom
IPR036678MutS_con_dom_sf
IPR016151DNA_mismatch_repair_MutS_N
IPR036187DNA_mismatch_repair_MutS_sf