mRNA_S-dermatodea_contig8513.16683.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig8513.16683.1 vs. uniprot
Match: D7FYL3_ECTSI (MutS protein homolog 3 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYL3_ECTSI) HSP 1 Score: 767 bits (1980), Expect = 9.450e-257 Identity = 504/779 (64.70%), Postives = 556/779 (71.37%), Query Frame = 1
Query: 457 VITADSFDLQENSGRREMFQAGVNATLCDGDQSKAEAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAAGGVKLTPMEQQVFDLKAQHPGVLLLVECGYRYRFFGEDALVAAKVLRIYAHMDHNFQVASVPTFRLAVHLRRLVDAGHKVGVVRQAESAALKAAGLTETGKKSGTFKRELAAVFTQATWMEGAVEALMPSSTSSTATTAGGGXXXXXXXXXXXXXXXXXXNAXXXXXXQGSWRKIGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESALSEAEMDAPVPQIDHERSEQWLLSVYEEDASRNAS-DSEPLSISLALMDGTTAGGADEVDAVRVGVIAVDVRTGRVVHDAFVEGSGQRQELDTRLRHLRPLELLAPGPRLSKATEATLARYCDSAVDARGDRRIVRTERLPPEEFCFDAAQTSLTEYYAKHKGXXXXXXXXXXXKGD--------APALTRVLDLARPEICALGPLMTHLQRFGLDRALATPDLVSFSQSRYMTLDAVTLRDLEV------------------------------------------------------------LQCQADGREAGSLFSVLDRTQTAFGRRVLAGWVRQPLLSPEDITARQDAVEEIATDAPPVMERLRPALRDLKDLDPAIASLHHRKIQPSRLLSLLGTMRKVFAVFHPPTGVAPSKNVRANGAD---AGGPTPEEQGSAKSRVLLEAIAGVPANMAMVIGRFLGELDAEAAA 2577
V +ADSF+L+E++ RR+ FQAG+ A L D XXXXXXXXXXX X XXXXXXXXXXXXXXXXXXXXXXXXXXX VKLTPMEQQV DLKA+HPGVLLLVECGYRYRFFG+DAL AAKVLRIYAHMDHNFQVASVPTFRLAVHLRRLVDAG+KVGVVRQAESAALKAAGLTETGKKSGTFKRELAAVF+QATW+EGAVEALMPSS+ S T G QGS+RKIGG XXXXXXXXX SEA+MDAP+PQ+DHERSEQWL+S+YEEDAS AS + EPLSIS+AL DG G +V+ VRVG+IAVDVRTG+VVHDAF EGSGQRQEL TRLRHLRPLELL PGPRLSK TEAT+ARYC+SAVDARGDRR+VRTERLPPE+FCF+AAQ SL++YY K +G G+ AP LTRVLDL RP ICALGPLMTHL+RFGLDR+LA+PDL SFS+S+YMTLDAVTLRDLEV LQCQADGREAGSLFS+LDRTQTAFGRRVLAGWVRQPLLSPEDITARQDAVEE+ TD P VMERLRP LRDLKDLDPAIASLHHR+IQP+RLLSLLGTMRKVF VFHPPT A GAD GP+ +++G +S VLL+A+A VPANMA VI R+LGEL+AEAAA
Sbjct: 273 VFSADSFNLEEDARRRKDFQAGLRAALPDDSDDGPSVAXXXXXXXXXXXDNGAPGGXLXXXXXXXXXXXXXXXXXXXXXXXXXXXR------VKLTPMEQQVVDLKAKHPGVLLLVECGYRYRFFGDDALAAAKVLRIYAHMDHNFQVASVPTFRLAVHLRRLVDAGYKVGVVRQAESAALKAAGLTETGKKSGTFKRELAAVFSQATWVEGAVEALMPSSSGSNTGTGG-----------------RSGTDAGKSGGQGSFRKIGGAWRRVGGWGKKGGKXXXXXXXXXEDSDQPGEPQPP--SEADMDAPLPQLDHERSEQWLMSMYEEDASPGASTEGEPLSISIALNDGGGGGAEKQVERVRVGLIAVDVRTGKVVHDAFEEGSGQRQELHTRLRHLRPLELLLPGPRLSKETEATVARYCESAVDARGDRRVVRTERLPPEDFCFEAAQASLSKYYGKGRGSSKPDASEGEKDGNGXXGGDGCAPVLTRVLDLPRPAICALGPLMTHLERFGLDRSLASPDLSSFSKSQYMTLDAVTLRDLEVSTTVVLPRKDAIVFVAACCLVLSGVTSFSSLVPPGEVGGAEQKIGSWSTDSRAPEVIPSVLQCQADGREAGSLFSILDRTQTAFGRRVLAGWVRQPLLSPEDITARQDAVEELVTDPPSVMERLRPTLRDLKDLDPAIASLHHRRIQPNRLLSLLGTMRKVFGVFHPPT---------ARGADETEGAGPS-QQRGGPRSVVLLDALADVPANMAPVIARYLGELNAEAAA 1016
BLAST of mRNA_S-dermatodea_contig8513.16683.1 vs. uniprot
Match: A0A6H5K2F4_9PHAE (DNA_MISMATCH_REPAIR_2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2F4_9PHAE) HSP 1 Score: 239 bits (611), Expect = 2.950e-66 Identity = 128/169 (75.74%), Postives = 140/169 (82.84%), Query Frame = 1
Query: 2071 VLQCQADGREAGSLFSVLDRTQTAFGRRVLAGWVRQPLLSPEDITARQDAVEEIATDAPPVMERLRPALRDLKDLDPAIASLHHRKIQPSRLLSLLGTMRKVFAVFHPPTGVAPSKNVRANGADAGGPTPEEQGSAKSRVLLEAIAGVPANMAMVIGRFLGELDAEAAA 2577
VLQCQADGREAGSLFS+LDRTQTAFGRRVLAGWVRQPLLSPEDITARQDAVEE+ D P VMERLRPALRDLKDLDPA ASLHHR+IQPSRLLSLLGTMRKVF +FHPPT VR G + ++ G +S VLL+A+A VPANMA VI R+LGEL+AEAAA
Sbjct: 2 VLQCQADGREAGSLFSILDRTQTAFGRRVLAGWVRQPLLSPEDITARQDAVEELVADPPSVMERLRPALRDLKDLDPATASLHHRRIQPSRLLSLLGTMRKVFGIFHPPT-------VRGADKTEGAGSSQQGGGPRSAVLLDALADVPANMAPVIARYLGELNAEAAA 163
BLAST of mRNA_S-dermatodea_contig8513.16683.1 vs. uniprot
Match: UPI000B4EEBEF (DNA mismatch repair protein Msh3 isoform X1 n=2 Tax=Meriones unguiculatus TaxID=10047 RepID=UPI000B4EEBEF) HSP 1 Score: 240 bits (613), Expect = 8.250e-63 Identity = 177/531 (33.33%), Postives = 259/531 (48.78%), Query Frame = 1
Query: 742 TPMEQQVFDLKAQHPGVLLLVECGYRYRFFGEDALVAAKVLRIYAHMDHNFQVASVPTFRLAVHLRRLVDAGHKVGVVRQAESAALKAAGLTETGKKSGTFKRELAAVFTQATWMEGAVEALMPSSTSSTATTAGGGXXXXXXXXXXXXXXXXXXNAXXXXXXQGSWRKIGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESALSEAEMDAPVPQIDHERSEQWLLSVYEEDASRNASDSEPLSISLALMDGTTAGGADEVDAVRVGVIAVDVRTGRVVHDAFVEGSGQRQELDTRLRHLRPLELLAPGPRLSKATEATLARYCDSAVDARGDRRIVRTERLPPEEFCFDAAQTSLTEYYAKHKGXXXXXXXXXXXKGDAPALTRVLDLARPEICALGPLMTHLQRFGLDRALATPDLVSFSQSR--YMTLDAVTLRDLEVLQCQADGREAGSLFSVLDRTQTAFGRRVLAGWVRQPLLSPEDITARQDAVEEIATDAPPVMERLRPALRDLKDLDPAIASLHHRK 2328
TP+E Q D+K QH +L VECGY+YRFFGEDA +AA+ L IY H+DHNF AS+PT RL VH+RRLV G+KVGVV+Q E+AALKA G KS F R+L A++T++T + V ++ L + + ++ + S +LL +YEE N D + +IS+ G++ TG VV D F + S RQEL+TRL L+P+ELL P LS+ TE + R +AV R DR +R ER+ F + +A ++TE+YA+ +G + + + V++L +P IC+L ++ +L+ F L++ L+ P+ SR +M ++ TLR+LE+LQ Q D + GSLF VLD T+T+FGRR L WV QPLL DI AR DAV ++ V +++ LR L D++ + S++H+K
Sbjct: 188 TPLELQYIDMKQQHKDAILCVECGYKYRFFGEDAEIAARELNIYCHLDHNFMTASIPTHRLFVHVRRLVAKGYKVGVVKQTETAALKAIG----DNKSSVFSRKLTALYTKSTLIGEDVNPVI------------------------------------------------------------------------------------RLHDC---VNIDEVMADTSTNYLLCIYEE--KENIKDKKKGNISI-------------------GIVGAQPATGEVVFDCF-QDSASRQELETRLLSLQPVELLLPSD-LSQPTEMLIHRA--TAVSVRDDR--IRVERMSNTYFEYSSAFQTVTEFYARKA---------VDWQG-SQSFSGVINLEKPVICSLAAIIRYLKEFNLEKILSKPENFKQLSSRMEFMRINGTTLRNLELLQNQTDLKTKGSLFWVLDHTKTSFGRRKLKKWVTQPLLQLRDINARLDAVSDVLHSESSVFDQIENRLRKLPDIERGLCSIYHKK 590
BLAST of mRNA_S-dermatodea_contig8513.16683.1 vs. uniprot
Match: A0A8C2YM35_CHILA (MutS homolog 3 n=2 Tax=Chinchilla lanigera TaxID=34839 RepID=A0A8C2YM35_CHILA) HSP 1 Score: 234 bits (597), Expect = 1.430e-60 Identity = 179/544 (32.90%), Postives = 262/544 (48.16%), Query Frame = 1
Query: 742 TPMEQQVFDLKAQHPGVLLLVECGYRYRFFGEDALVAAKVLRIYAHMDHNFQVASVPTFRLAVHLRRLVDAGHKVGVVRQAESAALKAAGLTETGKKSGTFKRELAAVFTQATWMEGAVEALMPSSTSSTATTAGGGXXXXXXXXXXXXXXXXXXNAXXXXXXQGSWRKIGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESALSEAEMDAPVPQIDHERSEQWLLSVYEEDASRNASDSEPLSISLALMDGTTAGGADEVDAVRVGVIAVDVRTGRVVHDAFVEGSGQRQELDTRLRHLRPLELLAPGPRLSKATEATLARYCDSAVDARGDRRIVRTERLPPEEFCFDAAQTSLTEYYAKHKGXXXXXXXXXXXKGDAPALTRVLDLARPEICALGPLMTHLQRFGLDRALATPDLVS--FSQSRYMTLDAVTLRDLEVLQCQADGREAGSLFSVLDRTQTAFGRRVLAGWVRQPLLSPEDITARQDAVEEIATDAPPVMERLRPALRDLKDLDPAIASLHHRKIQPSRLLSLLGTM 2367
TP+E Q ++K QHP +L VECGY+YRFFGEDA +AA+ L IY H+DH+F ASVPT RL VH+RRLV G+KVGVV+Q E+AALKAAG + F R+L A++T++T + V L+ + A+S V +I + S +LL + E+ D E S+S+ G++AV TG V+ D F + + R EL+TR+R L+P ELL P LS+ TEA + R + V R DR +R ER+ F A +TE+YAK +G + + + +++L +P IC L ++ +L+ F L++ L+ P+ S+ +MT++ TLR+LE+LQ Q DG++ GSL VLD T+TAFGRR L WV QPLL +I AR DAV E+ V +L L+ L D++ + S++H+K ++ T+
Sbjct: 271 TPLELQYLEVKRQHPDAVLCVECGYKYRFFGEDAEIAARELNIYCHLDHSFMTASVPTHRLFVHVRRLVAKGYKVGVVKQTETAALKAAG----ENRGSVFARKLTALYTKSTLIGEDVNPLVK--------------------------------------------------------------------------------LDDAVS-------VDEITTDTSTGYLLCICED--KEGVKDRERGSVSM-------------------GLVAVQPATGEVLLDGFCDAA-PRLELETRVRSLQPAELLLPQC-LSEPTEALVRRAATAGV--RDDR--IRVERMDNVYFEHSHAFQVVTEFYAKDP---------VDVRG-SQSFSDIINLEKPVICCLAAIIRYLKEFNLEKILSKPENFKQLSSEMVFMTMNGTTLRNLEILQNQTDGKKRGSLLWVLDHTKTAFGRRELKKWVTQPLLKLSEINARLDAVSEVLHSESSVFGQLESQLQKLPDIERGLGSIYHKKCSTQEFFLIVKTL 686
BLAST of mRNA_S-dermatodea_contig8513.16683.1 vs. uniprot
Match: UPI0018D93EAD (DNA mismatch repair protein Msh3-like n=1 Tax=Patiria miniata TaxID=46514 RepID=UPI0018D93EAD) HSP 1 Score: 233 bits (595), Expect = 2.390e-60 Identity = 181/563 (32.15%), Postives = 266/563 (47.25%), Query Frame = 1
Query: 718 GAAGGVKLTPMEQQVFDLKAQHPGVLLLVECGYRYRFFGEDALVAAKVLRIYAHMDHNFQVASVPTFRLAVHLRRLVDAGHKVGVVRQAESAALKAAGLTETGKKSGTFKRELAAVFTQATWMEGAVEALMPSSTSSTATTAGGGXXXXXXXXXXXXXXXXXXNAXXXXXXQGSWRKIGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESALSEAEMDAPVPQIDHERSEQWLLSVYE-----EDASRNASDSEPLSISLALMDGTTAGGADEVDAVRVGVIAVDVRTGRVVHDAFVEGSGQRQELDTRLRHLRPLELLAPGPRLSKATEATLARYCDSAVDARGDRRIVRTERLPPEEFCFDAAQTSLTEYYA-KHKGXXXXXXXXXXXKGDAP--ALTRVLDLARPEICALGPLMTHLQRFGLDRALA-TPDLVSFS-QSRYMTLDAVTLRDLEVLQCQADGREAGSLFSVLDRTQTAFGRRVLAGWVRQPLLSPEDITARQDAVEEIATDAPPVMERLRPALRDLKDLDPAIASLHHRKIQPSRLLSLLGTMRKV 2376
G GVK TP+E Q ++K Q+P LL VECGY+Y+FFG+DA +AAK L I+ H DHNF VAS+P RL VH RRLV GHKVGVV+Q E+AALKAAG +S F+R+L+A++T++T + V+ ++ S S ++ E+ + VP +LL + E A +NAS V GV+A+ TG +++D+F + ELDTR+ H++P+ELL P L++ TE + S+ DR +R ER+ E F + A +T +Y+ + + + D L V++L P IC L L+ +L+ F L R L T +LVSFS +++ M LDA LR+LE+ + Q DG GSLF VLD T+T FG R+L W+ PL+ +I RQDAVEE+ M R R L + DL+ I S++H+K + +++ ++ K+
Sbjct: 233 GPLRGVKYTPLELQFLEIKKQYPDALLFVECGYKYKFFGQDAEIAAKELNIFCHPDHNFMVASIPVHRLFVHTRRLVAKGHKVGVVKQTETAALKAAG----DNRSAPFQRKLSALYTKSTLIGEDVDPVIGSLASDP-------------------------------------------------------------------------------TDGEVSSVVPS-------NYLLCLSEFTKPSSKARKNAS-------------------------VEFGVVAIQPATGDIIYDSFHDND-HLSELDTRIHHIQPVELLLPTV-LTEKTEKLVQDIVSSST-TEDDR--IRIERMDNEHFDYSEALDVVTAFYSLEDERDEEQETEKWKQRRDCANRKLQEVINLPVPVICCLAALLRYLKEFNLHRVLKMTSNLVSFSARNQCMKLDACALRNLEIFKNQTDGSGRGSLFWVLDHTKTRFGSRLLRKWLAMPLMELSNIQCRQDAVEELMHSDCEAMSRARDLLSKVPDLEKGICSIYHKKCSSAEFYTVVKSLSKL 675
BLAST of mRNA_S-dermatodea_contig8513.16683.1 vs. uniprot
Match: A0A0D2USV4_CAPO3 (DNA mismatch repair protein n=1 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2USV4_CAPO3) HSP 1 Score: 233 bits (594), Expect = 4.200e-60 Identity = 181/595 (30.42%), Postives = 269/595 (45.21%), Query Frame = 1
Query: 721 AAGGVK----LTPMEQQVFDLKAQHPGVLLLVECGYRYRFFGEDALVAAKVLRIYAHMDHNFQVASVPTFRLAVHLRRLVDAGHKVGVVRQAESAALKAAGLTETGKKSGTFKRELAAVFTQATWMEGAVEALMPSSTSSTATTAGGGXXXXXXXXXXXXXXXXXXNAXXXXXXQGSWRKIGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESALSEAEMDAPVPQIDHERSEQWLLSVYEEDASRNASDSEPLSISLALMDGTTAGGADEVDAVRVGVIAVDVRTGRVVHDAFVEGSGQRQELDTRLRHLRPLELLAPGPRLSKATEATLARYCDSAVDARGDRRIVRTERLPPEEFCFDAAQTSLTEYYA--------------------------KHKGXXXXXXXXXXXKGDAPALTRVLDLARPEICALGPLMTHLQRFGLDRALA-TPDLVSFSQSRYMTLDAVTLRDLEVLQCQADGREAGSLFSVLDRTQTAFGRRVLAGWVRQPLLSPEDITARQDAVEEIATDAPPVMERLRPALRDLKDLDPAIASLHHRKIQPSRLLSLLGTMRKVFAVFH---PPTG 2403
AAG K T +EQQ D+K QHP +L VECGY++RFFG+DA +AAK L I HNF AS+PT RL VH++RLV+ G+KVGVVRQ E+AALKAAG KS F R+L ++T+AT + +EA S+ T ++ +L+S++E A+ N++ LA + + + A R+ ++AV TG +++D F +G R EL+TRL HLRP EL+ P +LS TE +A + + +R ERLP +F + +A + +T ++ +H A AL VL+L++ + G L+ +L FGLD+ L T +L F Q +M L+ +TL +LEV + + DG G+LF++L+ T T FGRR+L W+ QPLL I RQDA+EE+ T P+ + + L+ + DLD + ++++K PS L LL ++ F PP G
Sbjct: 299 AAGNKKAKSPFTQLEQQYIDVKVQHPDAVLFVECGYKFRFFGDDAEIAAKELSIGCFPSHNFMTASIPTHRLPVHVKRLVNLGYKVGVVRQTETAALKAAG----DNKSAPFDRKLTGLYTRATLIGDDIEAENDSAEDETGSS----------------------------------------------------------------------------------------------HYLMSIFELVAADNSA--------LAAAERHS---SPLTPATRIAIVAVRPSTGDIIYDEFSDGL-TRSELETRLAHLRPTELILPM-QLSTRTEQLIAALAYGGGRSEAE---IRLERLPVAQFDYQSAVSDITRFFTASRTKSEAHLRSKSSSHSASEHESSDEHATLMEIDGQATSTTDGAAALNLVLNLSQGIVRCFGALLRYLSDFGLDQVLLLTSNLHHFHQRNHMLLNGLTLSNLEVFRNETDGGSTGTLFALLNHTVTPFGRRLLRTWIAQPLLDRSAILNRQDAIEELLTSEAPMFAKTKKMLQSVGDLDKGLCRIYYQKCSPSEFLMLLHAFNRMSGEFRFWCPPEG 779
BLAST of mRNA_S-dermatodea_contig8513.16683.1 vs. uniprot
Match: A0A8H7Q3L1_9FUNG (DNA_MISMATCH_REPAIR_2 domain-containing protein n=1 Tax=Umbelopsis vinacea TaxID=44442 RepID=A0A8H7Q3L1_9FUNG) HSP 1 Score: 230 bits (587), Expect = 1.420e-59 Identity = 181/566 (31.98%), Postives = 265/566 (46.82%), Query Frame = 1
Query: 742 TPMEQQVFDLKAQHPGVLLLVECGYRYRFFGEDALVAAKVLRIYAHMDHNFQVASVPTFRLAVHLRRLVDAGHKVGVVRQAESAALKAAGLTETGKKSGTFKRELAAVFTQATWMEGAVEALMPSSTSSTATTAGGGXXXXXXXXXXXXXXXXXXNAXXXXXXQGSWRKIGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESALSEAEMDAPVPQIDHERSEQWLLSVYEEDASRNASDSEPLSISLALMDGTTAGGADEVDAVRVGVIAVDVRTGRVVHDAFVEGSGQRQELDTRLRHLRPLELLAPGPRLSKATEATLARYCDSAVDARGDRRIVRTERLPPEEFC---FDAAQTSLTEYYAKHKGXXXXXXXXXXXKGDAPALTRVLDLAR-PEIC--ALGPLMTHLQRFGLDRALA-TPDLVSFSQSRYMTLDAVTLRDLEVLQCQADGREAGSLFSVLDRTQTAFGRRVLAGWVRQPLLSPEDITARQDAVEEIATDAPPVMERLRPALRDLKDLDPAIASLHHRKIQPSRLLSLLGTMRKVFAVFHPPTGVAPSK 2418
TP+E QV +LK ++PGVLL++E GY+Y+FFGEDA A+K+L I +MDHNF AS+PT RL H+RRLV+AGHKVGVVRQ E+AALKA G K G F REL ++T+ T++E E + T+ G G +L+ + EE+ GG DE VRVG++AV TG +V+D+F E + R EL+TR+ H++P ELL P LS+ TE + A GD VR ER+P + ++AA T ++++YA G +GD + T ++ R PE+ +L + +L F LD T FS +MTL+A T+ +LE+ + + E SLF +L+ T T+FG+R+L WV +PL++ + R +AVEE+ + P + ++R L+ L DL+ + +H+ K PS LL +L + KV +FH VA K
Sbjct: 130 TPLEVQVVELKEKYPGVLLVIEVGYKYKFFGEDAKTASKILNIAHYMDHNFYCASIPTHRLPFHVRRLVNAGHKVGVVRQTETAALKAVG----DNKQGPFLRELRNLYTKGTFVE---EMAAADIEGDSGTSPGSGSN-----------------------------------------------------------------------------------------YLMCIVEENRG--------------------GGGPDE--RVRVGIVAVQPATGDIVYDSF-EDTYMRSELETRVLHIQPCELLLPAT-LSRPTEKLIQHIALQRTTAFGDN--VRVERIPKDMVFATDYNAAFTYVSDFYANATGSQSSS------QGDVKSETLFAEILRLPEVIIKSLALTVKYLTDFQLDHVFKLTKYFNHFSSKSHMTLNANTMANLEIYRNSTNYGEKHSLFWILNHTNTSFGKRLLKRWVGRPLINKGLLEERTNAVEELISTDNPKVPKIRSLLKHLPDLEKGLCRIHYGKSSPSELLQVLNALEKVAELFHQAAPVADIK 567
BLAST of mRNA_S-dermatodea_contig8513.16683.1 vs. uniprot
Match: UPI0014552CDD (DNA mismatch repair protein Msh3-like n=1 Tax=Asterias rubens TaxID=7604 RepID=UPI0014552CDD) HSP 1 Score: 230 bits (586), Expect = 3.690e-59 Identity = 175/552 (31.70%), Postives = 253/552 (45.83%), Query Frame = 1
Query: 733 VKLTPMEQQVFDLKAQHPGVLLLVECGYRYRFFGEDALVAAKVLRIYAHMDHNFQVASVPTFRLAVHLRRLVDAGHKVGVVRQAESAALKAAGLTETGKKSGTFKRELAAVFTQATWMEGAVEALMPSSTSSTATTAGGGXXXXXXXXXXXXXXXXXXNAXXXXXXQGSWRKIGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESALSEAEMDAPVPQIDHERSEQWLLSVYEEDASRNASDSEPLSISLALMDGTTAGGAD-EVDAVRVGVIAVDVRTGRVVHDAFVEGSGQRQELDTRLRHLRPLELLAPGPRLSKATEATLARYCDSAVDARGDRRIVRTERLPPEEFCFDAAQTSLTEYYAKHKGXXXXXXXXXXXK-GDAPALTRVLDLARPEICALGPLMTHLQRFGLDRALA-TPDLVSFS-QSRYMTLDAVTLRDLEVLQCQADGREAGSLFSVLDRTQTAFGRRVLAGWVRQPLLSPEDITARQDAVEEIATDAPPVMERLRPALRDLKDLDPAIASLHHRKIQPSRLLSLLGTMRKV 2376
VK TP+E Q ++K QHP LL VECGYRYRFFGEDA +AAK L I+ H+DHNF VAS+P +RL VH RRLV GHKVGVV+Q E+AALKAAG K F+R+L A++T++T + V+ + S E EM + + P + L + T G A + D + G++A+ TG +++D+F + S ELDTRL+H++P+ELL P K + S D D RI R ER+ F + A ++ +Y + K L +++L P IC L L+ +L+ F L R L +LVSFS +S++M LDA LR+LE+ + Q DG GSL VL+ T+T FG R+L W+ PL+S DI RQDAV+E+ + + + L L DL+ I S++H+K + +++ ++ K+
Sbjct: 264 VKYTPLELQFIEIKRQHPDTLLFVECGYRYRFFGEDAEIAAKELNIFCHLDHNFMVASIPVYRLFVHTRRLVSKGHKVGVVKQTETAALKAAG----ENKGAPFERKLTALYTKSTLIGEDVDPV------------------------------------------------------------------------------------SGDPECEMSSAIA---------------------------PTNYLLCFSEFTKPGKAKVKKDQLEFGLVAIQPATGDIIYDSFHDNS-HLSELDTRLQHIQPVELLLPSLMSDKTEKFIRDMVSSSTTD---DDRI-RIERMENGHFEYTQALEIISAFYGEGDVASGSKEKAASGKLNQGRRLQEMINLPVPVICCLAALLAYLKEFQLHRVLKMASNLVSFSARSKFMKLDAYALRNLEIFKNQTDGSVKGSLLWVLNHTKTRFGGRLLRKWLATPLMSLGDIQTRQDAVKELIESDCEALTQAKDLLARLPDLEKGICSIYHKKCSSAEFYTVVKSLSKL 695
BLAST of mRNA_S-dermatodea_contig8513.16683.1 vs. uniprot
Match: A0A3P8TLM4_AMPPE (DNA mismatch repair protein n=1 Tax=Amphiprion percula TaxID=161767 RepID=A0A3P8TLM4_AMPPE) HSP 1 Score: 228 bits (582), Expect = 8.770e-59 Identity = 175/533 (32.83%), Postives = 249/533 (46.72%), Query Frame = 1
Query: 742 TPMEQQVFDLKAQHPGVLLLVECGYRYRFFGEDALVAAKVLRIYAHMDHNFQVASVPTFRLAVHLRRLVDAGHKVGVVRQAESAALKAAGLTETGKKSGTFKRELAAVFTQATWMEGAVEALMPSSTSSTATTAGGGXXXXXXXXXXXXXXXXXXNAXXXXXXQGSWRKIGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESALSEAEMDAPVPQIDHERSEQWLLSVYEEDASRNASDSEPLSISLALMDGTTAGGADEVDAVRVGVIAVDVRTGRVVHDAFVEGSGQRQELDTRLRHLRPLELLAPGPRLSKATEATLARYCDSAVDARGDRRIVRTERLPPEEFCFDAAQTSLTEYYAKHKGXXXXXXXXXXXKGDAPALTRVLDLARPEICALGPLMTHLQRFGLDRALATPDLVSFS----QSRYMTLDAVTLRDLEVLQCQADGREAGSLFSVLDRTQTAFGRRVLAGWVRQPLLSPEDITARQDAVEEIATDAPPVMERLRPALRDLKDLDPAIASLHHRK 2328
TP+EQQV LK QH LL VECGY+YRFFGEDA +AAK L I H+DHNF S+PT RL VH+RRLV GHKVGVV+Q E++A+KA+G ++ F R+L+A++T++T + V + E + +D P +LL + E + + L L VG++AV TG V+ D F +GS R EL+ R+ + P+E+L P +S+ T+ L +++ A DR VR E+ +F F +A ++TE+Y +G KG +L+ V L P IC LGPL+ +LQ F L+R L + SF +S ++L+A TLR+LE+L Q DG GSL VLD T+T FG+R++ WV QPL P+ I+ RQDAV+EI + +R L L DL+ I S++H+K
Sbjct: 198 TPLEQQVIQLKQQHKDALLAVECGYKYRFFGEDAEIAAKELNIVCHLDHNFMTCSIPTHRLFVHVRRLVSHGHKVGVVKQTETSAIKASG----ANRNSLFTRQLSALYTKSTLVGEDVNPVC----------------------------------------------------------------------------RLEDVVEGGCGDVVLDPP---------NSFLLCISE--------NWDKLKKQLT-----------------VGLVAVQPSTGDVLLDCFPDGSS-RSELEGRILKINPVEILVPSD-ISEQTQRLLLSIANASAQA-DDR--VRVEKRDSAQFEFASAMNTVTEFYCHAQG-----------KGSR-SLSSVASLESPVICCLGPLIQYLQEFSLERVLRSES--SFRRLSCESEGLSLNAATLRNLEILNNQTDGGVKGSLLWVLDHTRTPFGKRLMRKWVSQPLTDPQSISERQDAVQEILQSDSLTLNSVRSLLSHLPDLERGICSIYHKK 597
BLAST of mRNA_S-dermatodea_contig8513.16683.1 vs. uniprot
Match: UPI00165A4082 (DNA mismatch repair protein Msh3 n=1 Tax=Fundulus heteroclitus TaxID=8078 RepID=UPI00165A4082) HSP 1 Score: 228 bits (582), Expect = 9.880e-59 Identity = 175/531 (32.96%), Postives = 245/531 (46.14%), Query Frame = 1
Query: 742 TPMEQQVFDLKAQHPGVLLLVECGYRYRFFGEDALVAAKVLRIYAHMDHNFQVASVPTFRLAVHLRRLVDAGHKVGVVRQAESAALKAAGLTETGKKSGTFKRELAAVFTQATWMEGAVEALMPSSTSSTATTAGGGXXXXXXXXXXXXXXXXXXNAXXXXXXQGSWRKIGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESALSEAEMDAPVPQIDHERSEQWLLSVYEEDASRNASDSEPLSISLALMDGTTAGGADEVDAVRVGVIAVDVRTGRVVHDAFVEGSGQRQELDTRLRHLRPLELLAPGPRLSKATEATLARYCDSAVDARGDRRIVRTERLPPEEFCFDAAQTSLTEYYAKHKGXXXXXXXXXXXKGDAPALTRVLDLARPEICALGPLMTHLQRFGLDRALATPDLVS--FSQSRYMTLDAVTLRDLEVLQCQADGREAGSLFSVLDRTQTAFGRRVLAGWVRQPLLSPEDITARQDAVEEIATDAPPVMERLRPALRDLKDLDPAIASLHHRK 2328
TP+EQQV +LK QH LL VECGY+YRFFGEDA +AAK L I H+DHNF S+PT RL VH+RRLV GHKVGVV+Q E++ALKA+G ++ F R+L+A++T++T L+ + A E ++ D P + +LL + E + + L L+ VGV+AV TG V D F +G R EL++R+ + P+E+L P LS+ T L +++ A D RI R ER EF F +A ++ ++Y + D+ +L+ V P IC LGPL+ +LQ F L+R L +S M+L A T+R+LE+L Q DG GSL VLD T+TAFGRR+L WV QPL+ P+ I+ RQDAV+E+ + +R L L DL+ I S++H K
Sbjct: 225 TPLEQQVMELKQQHKDALLAVECGYKYRFFGEDAEIAAKELNITCHLDHNFMTCSIPTHRLFVHVRRLVSQGHKVGVVKQTETSALKASGTN----RNALFSRQLSALYTKST--------LVGEDVNPVCRMA--------------------------------------------------------------------DVEEGGFADVVSDPP---------DSFLLCISE--------NWDKLKKQLS-----------------VGVVAVQPSTGDVFLDCFPDGPS-RSELESRILKINPVEVLVPSD-LSEQTSKLLLSIANASAQA--DDRI-RVERRDSAEFEFTSAMNTVVKFYCH------------TPEKDSRSLSTVASFESPVICCLGPLIQYLQEFNLERVLRNESFFRQLSCESGGMSLSAATIRNLEILNNQTDGSVRGSLLWVLDHTRTAFGRRLLRKWVSQPLMEPQCISERQDAVQEMIESDSLTLNSIRSLLSHLPDLERGICSIYHGK 624 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig8513.16683.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig8513.16683.1 >prot_S-dermatodea_contig8513.16683.1 ID=prot_S-dermatodea_contig8513.16683.1|Name=mRNA_S-dermatodea_contig8513.16683.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=860bp RQEIEICSSDGGVDDSASGDNNGDGDDSDFEDVPIGRDRKRAKKATSVDEback to top mRNA from alignment at S-dermatodea_contig8513:1969..8681+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig8513.16683.1 ID=mRNA_S-dermatodea_contig8513.16683.1|Name=mRNA_S-dermatodea_contig8513.16683.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=6713bp|location=Sequence derived from alignment at S-dermatodea_contig8513:1969..8681+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig8513:1969..8681+ >mRNA_S-dermatodea_contig8513.16683.1 ID=mRNA_S-dermatodea_contig8513.16683.1|Name=mRNA_S-dermatodea_contig8513.16683.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=5160bp|location=Sequence derived from alignment at S-dermatodea_contig8513:1969..8681+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |