mRNA_S-dermatodea_contig8511.16682.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-dermatodea_contig8511.16682.1
Unique NamemRNA_S-dermatodea_contig8511.16682.1
TypemRNA
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Homology
BLAST of mRNA_S-dermatodea_contig8511.16682.1 vs. uniprot
Match: A0A6H5K3N3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3N3_9PHAE)

HSP 1 Score: 439 bits (1130), Expect = 1.290e-151
Identity = 232/344 (67.44%), Postives = 270/344 (78.49%), Query Frame = 1
Query:   16 SPYRQPSTRPPPFRVRAYNDRLFQSLLDDGKPNSPSGSYSRRVCVATPSYPSKQNRPESRINAGAAARKKRQEDQYRLQLVQQQLAQSRLLRDSLLEAAAKKEREFVRLSGEVAEGHEFVNELDRVLGIAEEAERSKTVKQFQEWDGNVHGEIQRRIDEALASMDSKDINERRRADLANFLATTNAKAAVFRDIIIEAEYDPLEPNRRAIKARVLHLRDPCRRVLDKRAEENGLLSDEGSRTSLALLRETFDVELWEERKVKDTPHGFFAKMMDREASKASKVNPNTAKLFSRTYQTNFKMDDYVVHRGKDIVTKEFPKGKKTFQAGDEFAPPSSESKSLIGMG 1047
            SPY QPS RPP FRVR YND LF+SLLDDG+ +S S     R   + PS P +++R E+ + AGA A+KKR+E QY  QL QQQL Q RL+RD LLEAAA KEREFVRLSGE+  G  FV ELDR+LGIA+EA+R KT+KQ+QEWD NVHG IQ RID+ L  M SKDINERRR DL  FL TTN KAAVFRDIIIE+EYDPLEPNRRA+KA+V HLRDPC RVLDKRA+ENGLL+DEG   + A+LRE+FDV  WEERKV DTPHGFFAKMM REA++      +T    S+TY++  KMDDY V RG+DIVTKEFPKGKKT+ AGDE APPSS+++SLIGMG
Sbjct:   18 SPYAQPSNRPPAFRVRVYNDGLFKSLLDDGRTSSTSPRSLGRSAKSRPSRPPQEDRSEAMLKAGALAKKKRREKQYLFQLTQQQLLQDRLVRDKLLEAAASKEREFVRLSGEIEAGRTFVKELDRILGIADEAQRGKTLKQYQEWDANVHGAIQGRIDKVLDKMSSKDINERRRGDLDKFLTTTNTKAAVFRDIIIESEYDPLEPNRRAVKAKVGHLRDPCSRVLDKRAQENGLLADEGVGGAGAMLRESFDVIQWEERKVHDTPHGFFAKMMGREAARNKMGGASTT---SKTYRSTIKMDDYNVDRGRDIVTKEFPKGKKTYPAGDELAPPSSDAESLIGMG 358          
BLAST of mRNA_S-dermatodea_contig8511.16682.1 vs. uniprot
Match: D8LIN6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIN6_ECTSI)

HSP 1 Score: 387 bits (995), Expect = 2.900e-132
Identity = 206/284 (72.54%), Postives = 236/284 (83.10%), Query Frame = 1
Query:  196 INAGAAARKKRQEDQYRLQLVQQQLAQSRLLRDSLLEAAAKKEREFVRLSGEVAEGHEFVNELDRVLGIAEEAERSKTVKQFQEWDGNVHGEIQRRIDEALASMDSKDINERRRADLANFLATTNAKAAVFRDIIIEAEYDPLEPNRRAIKARVLHLRDPCRRVLDKRAEENGLLSDEGSRTSLALLRETFDVELWEERKVKDTPHGFFAKMMDREASKASKVNPNTAKLFSRTYQTNFKMDDYVVHRGKDIVTKEFPKGKKTFQAGDEFAPPSSESKSLIGMG 1047
            + AGA A+KKR+E QY LQL QQQL Q RL+RD LLEAAA KEREFVRLSGEV  G  FV ELDR+LGIA+EA++ KT+KQ+QEWD NVHG IQ RID+ L  M SKDINERRR DL  FL TTN KAAVFRDIIIE+EYDPLEPNRRA+KA+V HLRDPC RVLDKRAEENGLL+DEG+  + A+LRE+FDV  WEERKV DTPHGFFAKMM REA++ +K+    AK  S+TY++  KMDDY V RG+DIVTKEFPKGKKT+ AGDEFAPPSS++KSLIGMG
Sbjct:    2 LKAGALAKKKRREKQYLLQLTQQQLLQDRLVRDKLLEAAASKEREFVRLSGEVEAGRTFVKELDRILGIADEAQQGKTLKQYQEWDANVHGAIQGRIDKVLDKMSSKDINERRRGDLDKFLTTTNTKAAVFRDIIIESEYDPLEPNRRAVKAKVGHLRDPCSRVLDKRAEENGLLADEGAGGAGAMLRESFDVIQWEERKVHDTPHGFFAKMMGREAAR-NKMGG--AKTTSKTYRSTIKMDDYNVDRGRDIVTKEFPKGKKTYAAGDEFAPPSSDAKSLIGMG 282          
BLAST of mRNA_S-dermatodea_contig8511.16682.1 vs. uniprot
Match: A0A7S2FRU1_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FRU1_9STRA)

HSP 1 Score: 191 bits (484), Expect = 2.010e-54
Identity = 120/328 (36.59%), Postives = 184/328 (56.10%), Query Frame = 1
Query:   49 PFRVRAYNDRLFQSLLDD-----------GKPNSP--SGSYSRRVCVATPSYPSKQNRPESRIN-AGAAARKKRQEDQYRLQLVQQQLAQSRLLRDSLLEAAAKKEREFVRLSGEVAEGHEFVNELDRVLGIAEEAERSKTVKQFQEWDGNVHGEIQRRIDEALASMDSKDINERRRADLANFLATTNAKAAVFRDIIIEAEYDPLEPNRRAIKARVLHLRDPCRRVLDKRAEENGLLSDEGSRTS--LALLRETFDVELWEERKVKDTPHGFFAKMMDREASKASKVNPNTAKLFSRTYQTNFKMDDYVVHRGKDIVTKEFPKGKKT 984
            P RVR YN+  F++LL D           GKP +    G  + RV     +  ++  R   R   A    ++KR+ +++R +  + Q    R +R+ L+  + ++E +F     ++ EG    +E+   L + + AE++K  +QF++W+ NV+G++Q RI E L    S DIN +RR +   FL TTN+K A+FRDIIIE+EYDPLEPNR  IK     +RDPC RV+DK  EE+G+L    +  +  +A  R++ +V +W   K++ TPHGFFAK+M  E+ + SK         S+T+ +    D Y V  GK I   EFP+GK+T
Sbjct:   12 PSRVRIYNEDHFETLLLDDDKSTQGGASPGKPETSRSGGGGTSRVEEERSAIKARSLRATERAREADLEEQRKRRFERHRDEAKRMQAESERQVRERLVMNSLRREDKFNHYYSDLVEGRRLASEIKTSLDLQDAAEQNKVRRQFEDWNQNVYGKLQNRISERLDRTTSHDINVKRRQEFQKFLDTTNSKGAIFRDIIIESEYDPLEPNRNCIKVDSSDVRDPCSRVVDKNLEESGMLDSPSAMAAAKMARTRDSLEVTMWGTGKIESTPHGFFAKIMANESKQGSKEK-------SKTWDSRIPFDHYNVAVGKAITDTEFPRGKRT 332          
BLAST of mRNA_S-dermatodea_contig8511.16682.1 vs. uniprot
Match: F0YG16_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YG16_AURAN)

HSP 1 Score: 199 bits (506), Expect = 2.000e-53
Identity = 126/334 (37.72%), Postives = 185/334 (55.39%), Query Frame = 1
Query:   43 PPPFRVRAYNDRLFQSLLDDGKP---NSPSGSYSRRVCVATPSYPSKQNRPESRINAGAAARKK-RQEDQYRLQLVQQQLAQSRLLRDSLLEAAAKKEREFVRLSGEVAEGHEFVNELDRVLGIAEEAERSKTVKQFQEWDGNVHGEIQRRIDEALASMDSKDINERRRADLANFLATTNAKAAVFRDIIIEAEYDPLEPNRRAIKARVLHLRDPCRRVLDKRAEENGLLSDEGSRTSLA----------------LLRETFDVELWEERKVKDTPHGFFAKMMDREASKASKVNPNTAKLFSRTYQTNFKMDDYVVHRGKDIVTKEFPKGKKT 984
            P P RV+ Y++     LL D  P    S +   +R +  A  +    Q R E R  A  A  ++ R+ +++R +  ++Q    R +R+ L+E+AA++ER+F  L  ++ EGH+  +E+ + L + E   R+K  +QF EW+  V+G IQ +I++ L  MDS +IN RRR +   FL TTNAK A+FRDIIIE+EYDPLEPNR  IK +   +RDP +RVLDK  EE  +L D+G                      ++RET ++  W   K++ TPHG+FAK+MD          P   K  S+T+++N   D Y V  G     KEFP GK+T
Sbjct:  316 PSPSRVKVYDEDKLAMLLGDAPPPTHQSVTLGRTRSIHAAMRA----QQRSEKRRQAREAEEQRVRRYERHRDEANKRQAEAERAVREQLIESAARRERKFNELRSDIVEGHKLADEIQQHLSLQEMNARTKLKRQFDEWNDGVYGAIQDQINDRLDGMDSSEINRRRRHEFQKFLDTTNAKGAIFRDIIIESEYDPLEPNRNCIKVKTEGIRDPVKRVLDKHHEETSMLDDDGGGDXXXXXXXXXXXXXXXXPRPVVRETLEITSWGAGKIEATPHGYFAKLMDEAKP------PAGDKGKSKTFESNIPFDHYNVSVGSAATDKEFPVGKRT 639          
BLAST of mRNA_S-dermatodea_contig8511.16682.1 vs. uniprot
Match: A0A8J2SEP3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SEP3_9STRA)

HSP 1 Score: 168 bits (425), Expect = 1.330e-44
Identity = 104/239 (43.51%), Postives = 141/239 (59.00%), Query Frame = 1
Query:  289 RDSLLEAAAKKEREFVRLSGEVAEGHEFVNELDRVLGIAEEAERSKTVKQFQEWDGNVHGEIQRRIDEALASMDSKDINERRRADLANFLATTNAKAAVFRDIIIEAEYDPLEPNRRAIKARVLHLRDPCRRVLDKRAEENGLL---SDEGS-----RTSLALLRETFDVELWEERKVKDTPHGFFAKMMDREASKASKVNPNTAKLFSRTYQTNFKMDDYVVHRGKDIVTKEFPKGKK 981
            R+ + E A ++ER F  L  ++ EGH+  +E+ + L + +  +++K  +QF EW+  V+G+IQ +I+E L S  +  IN RRR +   FL  TNAK A+FRDIIIE+EYDPLEPNR  IK     LRDP +RVLD++ EE G+L   SDE       R      RE  DV  W   K++DTPHGFFAKMMD     A+   P   K  S+TY +    D + V +  D    EFP+GKK
Sbjct:  208 RERVAENANRRERRFEFLRSDIVEGHKLADEVQKHLQLEDMNKQTKLKRQFDEWNSEVYGKIQDQINERLDSTTAAQINARRRREYQKFLDATNAKGAIFRDIIIESEYDPLEPNRHCIKVDTYGLRDPMKRVLDRQYEEQGMLDASSDEEDKKRKPRRPRPHTREVLDVREWATGKIEDTPHGFFAKMMD-----ATPRAPGEKKT-SKTYDSKVPFDHFQVQKSLD---GEFPRGKK 437          
BLAST of mRNA_S-dermatodea_contig8511.16682.1 vs. uniprot
Match: A0A482S2M0_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S2M0_9ARCH)

HSP 1 Score: 162 bits (409), Expect = 3.060e-43
Identity = 86/224 (38.39%), Postives = 139/224 (62.05%), Query Frame = 1
Query:  316 KKEREFVRLSGEVAEGHEFVNELDRVLGIAEEAERSKTVKQFQEWDGNVHGEIQRRIDEALASMDSKDINERRRADLANFLATTNAKAAVFRDIIIEAEYDPLEPNRRAIKARVLHLRDPCRRVLDKRAEENGLLSDEGSRTSLALLRETFDVELWEERKVKDTPHGFFAKMMDREASKASKVNPNTAKLFSRTYQTNFKMDDYVVHRGKDIVTKEFPKGKKTF 987
            +KE+EF  L  ++    EF+  +++ + +A+EA+R+K  +QF++W+ NVHG IQ++I   + SMD K +N ++  D   FL  TN KAA+FRDIIIE+EYDPLEPNR  +KA+   L DP +  L K  +E G+L  E +   + L + T DV+LW   +++ TP+G FAKMM++    +   +P +A     T +++   D +   +G+  + KE P+GK+ +
Sbjct:   93 RKEKEFPELLAKIDRAREFLGTVEKEMELADEAKRNKVRRQFEDWNTNVHGVIQKKIASQIDSMDKKALNWKKNQDYDKFLGITNRKAAIFRDIIIESEYDPLEPNRHCVKAKTSKLHDPPKFGLHKAEKEKGMLGAEHAPPKVLLGKNTLDVQLWASGQIEATPYGTFAKMMNKPTGHSGN-SPQSA-----TQRSSVAFDHFSFPQGRAAIDKEMPRGKRVY 310          
BLAST of mRNA_S-dermatodea_contig8511.16682.1 vs. uniprot
Match: A0A7S1XXV3_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XXV3_9STRA)

HSP 1 Score: 147 bits (372), Expect = 5.600e-38
Identity = 89/242 (36.78%), Postives = 142/242 (58.68%), Query Frame = 1
Query:  262 QQLAQSRLLRDSLLEAAAKKEREFVRLSGEVAEGHEFVNELDRVLGIAEEAERSKTVKQFQEWDGNVHGEIQRRIDEALASMDSKDINERRRADLANFLATTNAKAAVFRDIIIEAEYDPLEPNRRAIKARVLHLRDPCRRVLDKRAEENGLLSDEGSRTSLALLRET-FDVELWEERKVKDTPHGFFAKMMDREASKASKVNPNTAKLFSRTYQTNFKMDDYVVHRGKDIVTKEFPKGKKT 984
            Q+ +Q+R+ R+ + E A ++E +F  L   V EGH+ V+E+++ + + +  E +K  ++F++W+ NV+G+I   I   L     +++N  RR D   FL  TN K A+FRDIII  EYDPL PNRR I+A+   + DP +RVL +R EE  +L  EG +  + L R++   +E W   K++ TPHGFFA+MM +   K   +           Y ++  +D Y +  G+ +V  EFP+GK+T
Sbjct:   85 QEESQARV-REKIAENARRREDDFQALKTSVFEGHQLVDEIEKDMTLKDMNELNKQRRKFEDWNTNVYGKIHGDITRQLNERPYQEVNVNRRRDFQQFLDATNTKGALFRDIIIPEEYDPLAPNRRCIRAQPKTIDDPVKRVLARRDEEERML--EGPKPQVPLGRKSDLKLEHWASGKIEATPHGFFARMMAKPQGKGDNL-----------YASSIVLDHYNIATGRAVVNAEFPRGKRT 312          
BLAST of mRNA_S-dermatodea_contig8511.16682.1 vs. uniprot
Match: A0A7S3XKK9_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XKK9_HETAK)

HSP 1 Score: 136 bits (343), Expect = 3.390e-34
Identity = 91/232 (39.22%), Postives = 124/232 (53.45%), Query Frame = 1
Query:  298 LLEAAAKKEREFVRLSGEVAEGHEFVNELDRVLGIAEEAERSKTVKQFQEWDGNVHGEIQRRIDEALASMDSKDINERRRADLANFLATTNAKA-AVFRDIIIEAEYDPLEPNRRAIKARVLH-LRDPCRRVLDKRAEENGLLSDEGSRTSLALLRETFDVELWEERKVKDTPHGFFAKMMDREASKASKVNPNTAKLFSRTYQTNFKMDDYVVHRGKDIVTKEFPKGKKTF 987
            L +  A +E++F  L  +V  G E   E DR + + + A R KT KQF EW+  V+G +Q +I E L   D K++  +R     ++L T+N K  AVFRDIIIE+EYDPL PNR AI+ R    LRDP RRV D+  EE  LL+ EG  +    +RET  V  W   K++ T HGF  KMM R  S+             +   +   MD Y + +      +EFP GK+ F
Sbjct:   54 LADNQANREKKFEDLMYDVKMGKELTEEADRAIALYDTARRLKTEKQFDEWNTGVYGHLQEKICEDLDRRDYKELQRQRNQAFQDYLDTSNKKGGAVFRDIIIESEYDPLAPNRGAIRVRGGRALRDPTRRVNDRHHEEQSLLA-EGRVSREPKVRETLRVGEWATGKIEATSHGFMHKMMHRNPSEHD----------GKPTHSTIAMDHYNIEKSSKFTNQEFPIGKRIF 274          
BLAST of mRNA_S-dermatodea_contig8511.16682.1 vs. uniprot
Match: A0A024UQY0_9STRA (Uncharacterized protein n=3 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UQY0_9STRA)

HSP 1 Score: 133 bits (334), Expect = 3.230e-32
Identity = 105/326 (32.21%), Postives = 168/326 (51.53%), Query Frame = 1
Query:   58 VRAYNDRLFQSLLDDGKPNSPSGSYSRRVCVATPSYPSKQNRPESRINAGAAA--RKKRQEDQYRLQLVQQQLAQSRL---LRDSLLEAAAKKEREFVRLSGEVAEGHEFVNELDRVLGIAEEAERSKTVKQFQEWDGNVHGEIQRRIDEALASMDSKDINERRRADLANFLATTNAKAAVFRDIIIEAEYDPLEPNRRAIKARVLHLRDPCRRVLDKRAEENGLLSD-----------EGSRTSLALLR-ETFDVELWEERKVKDTPHGFFAKMMDREASKASKVNPNTAKLFSRTYQTNFKMDDYVVHRGKDIVTKEFPKGKKT 984
            VR YN   F++L  +   NS S +  ++    + S  S    P S   +  +   R+KR   ++ L    Q+  Q ++   + DSL +   K+E  FV+L  ++ EG     EL+  L I EE  + +  + ++EW   V+ +I   I+E + +MDSK +N  ++    +FL T N K  +FRDIIIE+EYDPL  N+ AI+     + DPC RV+  R EE+ + ++            G+  +L L R +  D +LW     + TP+G+F KMM      AS ++  +    S+TY++  K D Y + +G   + KEFPKGK+T
Sbjct:   29 VRVYNKDQFEALQQNALNNSKSPTSEKQKTPHS-SLGSSNGYPYSAKTSDLSTDTRQKRLLMKHELYKKDQENIQKQIQINIADSLAKQRNKREANFVKLRRDIDEGKSLAQELEERLLIKEETAKRQKQRLYEEWSEKVYNKINGPINERVKAMDSKALNLHKQEAYQHFLDTANKKGCLFRDIIIESEYDPLHENK-AIQ-HCTRVDDPCCRVIKHREEEDAIANEGKKVLDDSMEPHGNGVTLVLGRCDNLDTKLWASGIFEATPYGYFNKMM------ASTISAES----SKTYESRVKFDHYDIEKGVGTLNKEFPKGKQT 341          
BLAST of mRNA_S-dermatodea_contig8511.16682.1 vs. uniprot
Match: W4FLA8_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FLA8_9STRA)

HSP 1 Score: 131 bits (329), Expect = 1.070e-31
Identity = 103/336 (30.65%), Postives = 167/336 (49.70%), Query Frame = 1
Query:   58 VRAYNDRLFQSLLDDGKPNSPSGSYSRRVCVATPS-------YPSKQ-------NRPESRINAGAAARKKRQEDQYRLQLVQQQLAQSRLLRDSLLEAAAKKEREFVRLSGEVAEGHEFVNELDRVLGIAEEAERSKTVKQFQEWDGNVHGEIQRRIDEALASMDSKDINERRRADLANFLATTNAKAAVFRDIIIEAEYDPLEPNRRAIKARVLHLRDPCRRVLDKRAEENGLLSD-----------EGSRTSLALLR--ETFDVELWEERKVKDTPHGFFAKMMDREASKASKVNPNTAKLFSRTYQTNFKMDDYVVHRGKDIVTKEFPKGKKT 984
            +R YN   F++L  +   NS S +  ++    + S       YP          N  + R+       KK QED      VQ+Q+  +  + DSL +   K+E  +V+L  ++ EG     EL+  L + EE  + +  + + EW   V  +I   I++ + +MD+K +N  ++    +FL T N K  +FRDIIIE+EYDPL  N+ +I+  V H+ DPC RV+  R EE  + ++            G+ T+  +L   +  D +LW     + TP+G+F KMM      AS ++  +    S+TY++  K D Y + +G   + KEFPKGK+T
Sbjct:    3 IRVYNKDQFEALQQNALNNSKSPTSEKQRTPRSSSVGGGSGGYPHSAKTSDLSTNTRQKRLMMKHELYKKDQED------VQKQIQVN--IADSLTKQRNKREANYVKLRRDIDEGKSLAEELEERLSLKEETAKRQKQRLYDEWSEKVFNKINGPINDRVKAMDAKALNLHKQEAYQHFLDTANKKGCLFRDIIIESEYDPLHDNK-SIR-HVTHVDDPCCRVIKHREEEEAIANEGKKVLDDSMEPRGTGTAPLILGRCDNLDTKLWASGIFESTPYGYFNKMM------ASTISAES----SKTYESRVKFDHYDIEKGLGTLNKEFPKGKQT 318          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig8511.16682.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K3N3_9PHAE1.290e-15167.44Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LIN6_ECTSI2.900e-13272.54Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S2FRU1_9STRA2.010e-5436.59Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
F0YG16_AURAN2.000e-5337.72Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A8J2SEP3_9STRA1.330e-4443.51Hypothetical protein (Fragment) n=1 Tax=Pelagomona... [more]
A0A482S2M0_9ARCH3.060e-4338.39Uncharacterized protein n=1 Tax=archaeon TaxID=190... [more]
A0A7S1XXV3_9STRA5.600e-3836.78Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A7S3XKK9_HETAK3.390e-3439.22Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A024UQY0_9STRA3.230e-3232.21Uncharacterized protein n=3 Tax=Aphanomyces invada... [more]
W4FLA8_9STRA1.070e-3130.65Uncharacterized protein n=2 Tax=Aphanomyces astaci... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig8511contigS-dermatodea_contig8511:2363..7734 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score391.0
Seed ortholog evalue6e-106
Seed eggNOG ortholog2880.D8LIN6
EggNOG OGs29M9N@1,2RUJB@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-11_004560.1
Exons7
Model size1050
Cds size1050
Stop1
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622925348.3284461-CDS-S-dermatodea_contig8511:2362..25261622925348.3284461-CDS-S-dermatodea_contig8511:2362..2526Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8511 2363..2526 -
1694079872.6650932-CDS-S-dermatodea_contig8511:2362..25261694079872.6650932-CDS-S-dermatodea_contig8511:2362..2526Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8511 2363..2526 -
1622925348.345641-CDS-S-dermatodea_contig8511:3302..34581622925348.345641-CDS-S-dermatodea_contig8511:3302..3458Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8511 3303..3458 -
1694079872.6768649-CDS-S-dermatodea_contig8511:3302..34581694079872.6768649-CDS-S-dermatodea_contig8511:3302..3458Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8511 3303..3458 -
1622925348.3589764-CDS-S-dermatodea_contig8511:3887..40071622925348.3589764-CDS-S-dermatodea_contig8511:3887..4007Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8511 3888..4007 -
1694079872.687232-CDS-S-dermatodea_contig8511:3887..40071694079872.687232-CDS-S-dermatodea_contig8511:3887..4007Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8511 3888..4007 -
1622925348.3726907-CDS-S-dermatodea_contig8511:4577..47101622925348.3726907-CDS-S-dermatodea_contig8511:4577..4710Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8511 4578..4710 -
1694079872.7030513-CDS-S-dermatodea_contig8511:4577..47101694079872.7030513-CDS-S-dermatodea_contig8511:4577..4710Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8511 4578..4710 -
1622925348.3822203-CDS-S-dermatodea_contig8511:4945..50611622925348.3822203-CDS-S-dermatodea_contig8511:4945..5061Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8511 4946..5061 -
1694079872.7175431-CDS-S-dermatodea_contig8511:4945..50611694079872.7175431-CDS-S-dermatodea_contig8511:4945..5061Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8511 4946..5061 -
1622925348.3927517-CDS-S-dermatodea_contig8511:5382..55881622925348.3927517-CDS-S-dermatodea_contig8511:5382..5588Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8511 5383..5588 -
1694079872.7292936-CDS-S-dermatodea_contig8511:5382..55881694079872.7292936-CDS-S-dermatodea_contig8511:5382..5588Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8511 5383..5588 -
1622925348.406975-CDS-S-dermatodea_contig8511:7579..77341622925348.406975-CDS-S-dermatodea_contig8511:7579..7734Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8511 7580..7734 -
1694079872.7400405-CDS-S-dermatodea_contig8511:7579..77341694079872.7400405-CDS-S-dermatodea_contig8511:7579..7734Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8511 7580..7734 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig8511.16682.1prot_S-dermatodea_contig8511.16682.1Saccorhiza dermatodea SderLu1190fm monoicouspolypeptideS-dermatodea_contig8511 2363..7734 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-dermatodea_contig8511.16682.1

>prot_S-dermatodea_contig8511.16682.1 ID=prot_S-dermatodea_contig8511.16682.1|Name=mRNA_S-dermatodea_contig8511.16682.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=350bp
MADWTSPYRQPSTRPPPFRVRAYNDRLFQSLLDDGKPNSPSGSYSRRVCV
ATPSYPSKQNRPESRINAGAAARKKRQEDQYRLQLVQQQLAQSRLLRDSL
LEAAAKKEREFVRLSGEVAEGHEFVNELDRVLGIAEEAERSKTVKQFQEW
DGNVHGEIQRRIDEALASMDSKDINERRRADLANFLATTNAKAAVFRDII
IEAEYDPLEPNRRAIKARVLHLRDPCRRVLDKRAEENGLLSDEGSRTSLA
LLRETFDVELWEERKVKDTPHGFFAKMMDREASKASKVNPNTAKLFSRTY
QTNFKMDDYVVHRGKDIVTKEFPKGKKTFQAGDEFAPPSSESKSLIGMG*
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mRNA from alignment at S-dermatodea_contig8511:2363..7734-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-dermatodea_contig8511.16682.1 ID=mRNA_S-dermatodea_contig8511.16682.1|Name=mRNA_S-dermatodea_contig8511.16682.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=5372bp|location=Sequence derived from alignment at S-dermatodea_contig8511:2363..7734- (Saccorhiza dermatodea SderLu1190fm monoicous)
ATGGCGGACTGGACTTCGCCGTATAGGCAGCCCTCTACCCGCCCACCACC CTTCCGAGTTCGTGCTTACAACGATCGCCTGTTCCAGTCACTGCTGGATG ATGGGAAGCCAAACTCTCCGAGCGGTTCATACTCCAGGCGAGTTTGTGTG GCTACGTGTGGATGCTACGTATGTGGGGGTTCGCTGTAGCGATGATGACC TCACCAGATGGCATTTCCGTGCGCAGAGGCGTGGGAGACAATCGTTTTCA TCCAGACTTCAGACTGCAACTCAAGTACCATACCACCGCGTGCAACTTGC TTTGAGGCCACGGATGCATTCGGGAGTGTGGTGAAGTCCAAAAAAGCCAC GACAACTTGCAATCCTCCACACAGCAGAGCTAAGCGGCCGTCGAGTGGGC GTCAGACTTTGGAGCCGCTGCTGCTTAGCCCATGGTACTACTTCAGTGCG TCGGCTGCCGGTTGTTAAATTGTGCAAAAGTCCGCCGACTTCTACAAGTA GTGAGGGGCGGCCTGTGTTGTTTCAGCGACCTGGAAAATCAAAACAACAG AAAAATCAATACGAAAAAAGAGTGAGAGACAAATACATGTTCTTGGCTCA CAAGCACATCAAAAGTCCACGCGGGTCCTGTCCCAATGAGTTACGTATGG ATTGTATAATACACCCTCTGTTTTATGTTCGTTACTAGTTAGGCCTTTTG GGACTAAAGCTGTTTTCGGGTAACTGTTTGCTATTGTTATACACCCTTTT GTTTTGGGACTAANNNNNNNNNNGCTTAAGTCCCAAAACGGTAAATAATA ATAGGAAACAGTTACCCGAAAACAGCTTTAGTCCCAAAAGGGTTAACAGG CAAAACACACATTCGCTCAGGACAACGACACTTGTACCACAGCTATAACA TCACATACATGATACATGGCATGAAACCACAGCATCATACGCAACGTAAG CCTCTAAAGATGTTCCTGGTAGCTTGGACCATCTTCCCTTTTGAAAAGGT GTGACCCCAACGCTCTTTGAACTCGTTTTGTTTTGGGGGGGGCATCGTGT GGGCACTCCATAGGAAGATCACATGGAGCTCAACGATGTTTCATGCTATC TTCCATGTATGGTCAAGACGTTCCATGTCAATGCCCGACTTTCAACGGGA CGCTATGACGGACTCCATGGAAGTCCGTGAAAGGCTGGATGCAGCTTTAC AGTATTTCATGGGATTCCATGCATGCGCTATGCCTCTCCATGGAAAGCAG TATCACGCACGACGACGCATCCGTCCATGCATCGTCATGGCGCACACCAC GAAGCCAGTATGGGATGTTTTTCGTTGTTCCCTGCTATGATATTTTTCAT GGGCCGCCAAGGCGACGTTCCATTGTCTCGCATGCAAATGCCTCGCTCTG CATGGAATGTTTCCATGCAGCACCATACAGCAGCAAGCAACATGGAATAC TAATACTGCATTGACGCTCGAGAGGGCGTAAGGCTCTCATGGCTGGGTAC TCCGTGACTTGCGACCATGCGCCATCATGCATGAAACTACATACTGAGTC GTTAGCGTAATATTCCCTTCCAACAATCTCGTCGCAAACCATGGCGTGTT CTTGTGCGTGATGCACCTGTTGATCGCGATGCATTGTAGTGCATGCTGTT GCCCTGCTGCATGGAACTATCCGTGGAGAGCAATGCACTCCAATACGAGG TCTTGGAATTTCGTCATGACGTGCCCATGAAAAATCAAGGAGGAAGCGGA TAACATTGAAGCTCCCATGCTGGCTTCGCCGTGCCGATATGACGATACAT GCTCCCTCCTCACGGGGTAACCGGATATGAAGGGTGAGGTGCCTCGTCGT GTGTGATCCATGACAAGGCGTGGCACATGCATGAACTCCATGCAGCGGCG TGAAGCTGTATGACGGTGCATACAGCCTTTCACGGCCTACATGGAACCTA TCATGGTGTTCCATGAAAAGTCGGGCAGTTGCATGGAGTGTCATGTCTCT CCGTGGAAGGCTTCAAGACGCGCCATGGATCTCCATGGGAAGTTCCCTTG GAGCTCCCTCATTTGAAGGGCGCCGATTTTCAGCAGGTTGACCGCGACAC TTCCACCCGACGTGTACCCACGCTTTTGTCGTGCGTTTCAAAACAGGCCG TCGTACCCATCGAAGCAAAATCGGCCAGAGAGCAGGATAAACGCTGGAGC AGCAGCAAGGAAGAAACGACAGGAAGATCAGTACAGATTGCAACTAGTGC AGCAACAGCTTGCGCAAAGCAGACTGCTGAGGGATAGTCTACTGGAGGCC GCCGCCAAAAAAGAGAGAGAATTCGTGCGACTTTCGGGAGAGGTTGCCGA AGGTGAACGACGATAGCTTCGAGATAGAACCGACTTCGGCTTTGTCCTGG GTTGGCATATGCGCATCAGCCTGCTTATACCTCGCAGGAGGGTTAGGCTA TGATCGATCGGACCTGTGCTCCCGAATTCCTTGGGGTTAATAAATCAAGC CGCCACGTGTTGGCTCACACGTGGAATTATCGCCCGAGGCAATCGAATTG GCCTAACGGCGAGAAAACTAATGTAATTACACCGTACAGACCTAGCTCTT CAATCGTATTCTTCCAGCACGTCGCCCGCTGCCAAAATGGTAAAGTCGCA TTAAACGGCATCGTGTGCGTCAGGCCACGAGTTTGTGAACGAGCTGGACC GCGTCCTTGGCATTGCCGAAGAAGCCGAGCGGAGCAAAACGGTGAAGCAG TTCCAAGAATGGGACGGCAACGTCCACGGGGAGATTCAGGTGACGATTTG TGCAGATATGGAGCTGCCCACCACCAACGTCAGACGCACACATCAGAGCG CCACGGTGGGAAAATTGAAAATGTTGTGTCTCATCGGCGCTTGACCTTTT TATGATTGCCCCCTACCGCCAATTTTTGTTTGTGCTGCAGCTGCTGCGAA TTTACCTTCCTTGAAAATACCTGATAATTTTCCTCCGCCCCTGTTTCCGT ATGGCACTTGGCTCACTGGTACAGCGTCGAATCGACGAGGCGTTGGCGTC CATGGATTCCAAGGATATCAACGAACGCCGGCGGGCAGACCTGGCAAACT TTCTGGCGACGACTAACGCAAAGGCTGCTGTGTTTCGGGACATAATTATC GAAGCAGGTTTTGTTAAGCAGGTTTTGTTCGTGTAGCCTGGCAGACCTGT TCTTACTGGCCTGCGAGATTGTCCCTAAAATCTGTGACTCCGCTTGATGG CTGGCCAATCTACTCCCAAAGTGAAGGCGGCAACAAAGCCGCTCGTGCCA AACAGCAGAAGGGTGCCCATGTCCTACTAGTCACTCGTCAGTGCCCTTGT AGTCTCGGCCACCACCGTAAGACATGTCGGAAAACTTGGAGTGCCTGATG AAAGTTAGGAACACTGCCGCAAGACTAAAATAGGGGGTCAACCATTGCAG TATTTTTCGGAAGATACCCTGCCCGTCTGCTCAGCATTCCTCGTTTAGAT GGTACGTCTGATTGGGACTCTCGGAGGTGTTACCTTACGCGATTTACCGC GAATGCCGATGATACGTCGCGCAGCGGTGACTGTGTTGTACTAGAGTGAA ATTATGTTGTACAAACGTGACAAGCAGGGTTTTCCGCGACACTGATACAC TTATCGCGCCCCATATGCACCCCACGAGAGCTGTTCCTCTCACAAGCCCT GTTTTTTATCTGACTGGATCCTGGCAGAGTATGACCCTCTGGAGCCCAAC CGGCGGGCGATCAAAGCACGCGTTCTCCACCTCCGCGACCCTTGCAGGCG TGTTTTAGACAAACGAGCTGAGGAGAACGGCCTCCTGTCGGACGAGGGTG AGTGCTGCAAACGACGTGACAGTATAATTGGCTTTTTAGAGTCAATTGAG TCAAATGCGGAGCCGTCCCTGTTATGCTCGGGCGCCAACCGCCAGCGCTC AAACGTGATCTTAGAAGGGGCTTTTGCACAAGCGGAATGGGGTCGGTATG CTCCGTGAAGAATCCTACGAGAAGCCGTGCACGATTACGCCTGTGTGATG GAAGTTTGACGGGGCTAGCGGGTACTGCTGGTTTACAAAAGCAAGAGCGC ACGTTGATATGTTGGGTCTGGAAACGATTTACGCGGCCCTCTTCTTTCAC AGACAGCAAACCACCCATAGGTTTAAAGGGTAAATGCAATGCGTTTCTCC CCGTGGCACATCAATGGTTCCCTGACATGAAACGCCTCCCGTGTGCATCC CGCACATTCACGCGTCACGACGAAAGGCTCGAGGACATCACTCGCTCTGT TGAGAGAAACGTTTGACGTTGAACTCTGGGAGGAAAGGAAGGTGAAAGAT ACGCCCCACGGATTCTTTGCCAAGATGATGGACCGAGAGGCGTCCAAGGC GAGCAAGGTAAATCCCAATACCGCGAAGCTATGTTTATGATAAACCCAAA AGATGCCATTTCACTGCGTAGGCCTCAACACGCCCCACGTTCGCCGAAAT GGGTGCGCACGGCACGCTTGAGTTGCGTGGCCTATCGTCACGGTCAGCAA AGATATCCACAATACGTTGATGTCCCAAAACATATGCGGTTCGCTGCTGC GCGGACTGGTTTGGGGCGTCACGAGGAGTAGAAGCATTTTCGGTATGACG GTACAACCGATCGTACCATAATACACTTTGACGTACTTCCATCTGCACGG GCCGTGGAAAACATGTTGGCACTCTTGAGAGAAAAATATCCGAGCTGCCG TGCTTGAACAGGAAGGCCTCTCCGAAAACTACTGTATGTTCGCCGCTGCT TGCCTGTGGTAGTGCGATTGGTCTCCTGCGCTACCGAAACGGAAATGTTG CCTGCACCCGCTTGATGTAGCACCAGTGCCAAATACGACCCCCCCACCCC CTCCAGAAAAAACAAACATCTCTGACTAGCCACCCATCCAGCATAGAGTG AGTACAGTCCTCTTCCACGCAGTACCGTCAAGACCTCCGATGCAGCGGAG GCCCAACCTACAGCTGGTGCCGTTTGGTGATGCCGCGATTAGAAGGCCCA GAAACTGCTGTGCGTCGTGCACGCGTCTGTAATATTTGTGTACAGAAGGG GTAGTGGAAAACATGCCGTCCGCGGTCCGTATTTTCCGGTGACATCTTCA ATAGCTAGCAACGATGCCCGCCGATTGGTTTTCCTTTTCAACAATAAGGT GGGGAAAGTCTCGCGGACGTATCAGACGAACTTTAAAATGGACGACTACG TTGTCCATCGCGGAAAGGACATCGTAACCAAGGAGTTCCCGAAGGGAAAG AAGACTTTCCAGGCTGGGGACGAGTTTGCTCCCCCTTCCAGCGAAAGTAA GAGCCTCATCGGGATGGGTTGA
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Coding sequence (CDS) from alignment at S-dermatodea_contig8511:2363..7734-

>mRNA_S-dermatodea_contig8511.16682.1 ID=mRNA_S-dermatodea_contig8511.16682.1|Name=mRNA_S-dermatodea_contig8511.16682.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=2100bp|location=Sequence derived from alignment at S-dermatodea_contig8511:2363..7734- (Saccorhiza dermatodea SderLu1190fm monoicous)
ATGGCGGACTGGACTTCGCCGTATAGGCAGCCCTCTACCCGCCCACCACC
CTTCCGAGTTCGTGCTTACAACGATCGCCTGTTCCAGTCACTGCTGGATG
ATGGGAAGCCAAACTCTCCGAGCGGTTCATACTCCAGGCGAGTTTGTGTG
GCTACATGGCGGACTGGACTTCGCCGTATAGGCAGCCCTCTACCCGCCCA
CCACCCTTCCGAGTTCGTGCTTACAACGATCGCCTGTTCCAGTCACTGCT
GGATGATGGGAAGCCAAACTCTCCGAGCGGTTCATACTCCAGGCGAGTTT
GTGTGGCTACGCCGTCGTACCCATCGAAGCAAAATCGGCCAGAGAGCAGG
ATAAACGCTGGAGCAGCAGCAAGGAAGAAACGACAGGAAGATCAGTACAG
ATTGCAACTAGTGCAGCAACAGCTTGCGCAAAGCAGACTGCTGAGGGATA
GTCTACTGGAGGCCGCCGCCAAAAAAGAGAGAGAATTCGTGCGACTTTCG
GGAGAGGTTGCCGAAGGCCGTCGTACCCATCGAAGCAAAATCGGCCAGAG
AGCAGGATAAACGCTGGAGCAGCAGCAAGGAAGAAACGACAGGAAGATCA
GTACAGATTGCAACTAGTGCAGCAACAGCTTGCGCAAAGCAGACTGCTGA
GGGATAGTCTACTGGAGGCCGCCGCCAAAAAAGAGAGAGAATTCGTGCGA
CTTTCGGGAGAGGTTGCCGAAGGCCACGAGTTTGTGAACGAGCTGGACCG
CGTCCTTGGCATTGCCGAAGAAGCCGAGCGGAGCAAAACGGTGAAGCAGT
TCCAAGAATGGGACGGCAACGTCCACGGGGAGATTCAGGCCACGAGTTTG
TGAACGAGCTGGACCGCGTCCTTGGCATTGCCGAAGAAGCCGAGCGGAGC
AAAACGGTGAAGCAGTTCCAAGAATGGGACGGCAACGTCCACGGGGAGAT
TCAGCGTCGAATCGACGAGGCGTTGGCGTCCATGGATTCCAAGGATATCA
ACGAACGCCGGCGGGCAGACCTGGCAAACTTTCTGGCGACGACTAACGCA
AAGGCTGCTGTGTTTCGGGACATAATTATCGAAGCAGCGTCGAATCGACG
AGGCGTTGGCGTCCATGGATTCCAAGGATATCAACGAACGCCGGCGGGCA
GACCTGGCAAACTTTCTGGCGACGACTAACGCAAAGGCTGCTGTGTTTCG
GGACATAATTATCGAAGCAGAGTATGACCCTCTGGAGCCCAACCGGCGGG
CGATCAAAGCACGCGTTCTCCACCTCCGCGACCCTTGCAGGCGTGTTTTA
GACAAACGAGCTGAGGAGAACGGCCTCCTGTCGGACGAGGAGTATGACCC
TCTGGAGCCCAACCGGCGGGCGATCAAAGCACGCGTTCTCCACCTCCGCG
ACCCTTGCAGGCGTGTTTTAGACAAACGAGCTGAGGAGAACGGCCTCCTG
TCGGACGAGGGCTCGAGGACATCACTCGCTCTGTTGAGAGAAACGTTTGA
CGTTGAACTCTGGGAGGAAAGGAAGGTGAAAGATACGCCCCACGGATTCT
TTGCCAAGATGATGGACCGAGAGGCGTCCAAGGCGAGCAAGGTAAATCCC
AATACCGCGAAGCTATGCTCGAGGACATCACTCGCTCTGTTGAGAGAAAC
GTTTGACGTTGAACTCTGGGAGGAAAGGAAGGTGAAAGATACGCCCCACG
GATTCTTTGCCAAGATGATGGACCGAGAGGCGTCCAAGGCGAGCAAGGTA
AATCCCAATACCGCGAAGCTATTCTCGCGGACGTATCAGACGAACTTTAA
AATGGACGACTACGTTGTCCATCGCGGAAAGGACATCGTAACCAAGGAGT
TCCCGAAGGGAAAGAAGACTTTCCAGGCTGGGGACGAGTTTGCTCCCCCT
TCCAGCGAAAGTAAGAGCCTCATCGGGATGGGTTGATCTCGCGGACGTAT
CAGACGAACTTTAAAATGGACGACTACGTTGTCCATCGCGGAAAGGACAT
CGTAACCAAGGAGTTCCCGAAGGGAAAGAAGACTTTCCAGGCTGGGGACG
AGTTTGCTCCCCCTTCCAGCGAAAGTAAGAGCCTCATCGGGATGGGTTGA
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