mRNA_S-dermatodea_contig85.16667.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig85.16667.1 vs. uniprot
Match: D8LU73_ECTSI (Flagellar outer dynein arm light chain 2 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LU73_ECTSI) HSP 1 Score: 248 bits (633), Expect = 4.480e-83 Identity = 123/132 (93.18%), Postives = 126/132 (95.45%), Query Frame = 1
Query: 1 MAEEPRRGPPVVEIVLPTYISKPGEEEKFYPSEVKAIAEKAVQAELLDKVYDGEEAKEWSLNIADTIREGVKTLNVPRYKIVVQVTIGQMKDQGVRVASRCLWDTATDNYASVHLKNQSLWCSAMVFGVYTE 396
MAEEPRRGPPVVEIVLPTYI+KP E+EKFYPSEVKA+AEKAVQ EL DK YDGEEAKEWSLNIADTIREGVKTLNVPRYKIVVQVTIGQMKDQGVRVASRCLWDTATDNYASV KNQSLWCSAMVFGVYTE
Sbjct: 1 MAEEPRRGPPVVEIVLPTYITKPSEDEKFYPSEVKAVAEKAVQVELQDKEYDGEEAKEWSLNIADTIREGVKTLNVPRYKIVVQVTIGQMKDQGVRVASRCLWDTATDNYASVQFKNQSLWCSAMVFGVYTE 132
BLAST of mRNA_S-dermatodea_contig85.16667.1 vs. uniprot
Match: A0A835ZA97_9STRA (Flagellar outer dynein arm light chain 2 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZA97_9STRA) HSP 1 Score: 191 bits (485), Expect = 1.630e-60 Identity = 90/132 (68.18%), Postives = 110/132 (83.33%), Query Frame = 1
Query: 1 MAEEPRRGPPVVEIVLPTYISKPGEEEKFYPSEVKAIAEKAVQAELLDKVYDGEEAKEWSLNIADTIREGVKTLNVPRYKIVVQVTIGQMKDQGVRVASRCLWDTATDNYASVHLKNQSLWCSAMVFGVYTE 396
M E +G V+++VLPTY+ KP E+E FYP++ KA++EK V+AEL K YD +EAKEWSLNIAD IRE +K L++PRYK+VVQVT+GQMKDQGVRVASRCLWDTATDNYASV+ K QSLWC+ M FG+YTE
Sbjct: 1 MEESQPKGRQVIDVVLPTYVMKPAEDEVFYPAKAKAMSEKIVKAELGGKEYDEQEAKEWSLNIADAIREQIKQLSIPRYKVVVQVTVGQMKDQGVRVASRCLWDTATDNYASVNYKTQSLWCNVMCFGIYTE 132
BLAST of mRNA_S-dermatodea_contig85.16667.1 vs. uniprot
Match: A0A7S2V6C1_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V6C1_9STRA) HSP 1 Score: 181 bits (459), Expect = 1.540e-56 Identity = 89/133 (66.92%), Postives = 105/133 (78.95%), Query Frame = 1
Query: 1 MAEEPRRGPPVVEIVLPTYISKPGEEEKFYPSEVKAIAEKAVQAELLDKVYDGEEAKEWSLNIADTIREGVKT-LNVPRYKIVVQVTIGQMKDQGVRVASRCLWDTATDNYASVHLKNQSLWCSAMVFGVYTE 396
M EEP G P+VE+VLPTYI P E+EKFY S+VKAIAE+ ++ EL K Y+ EAK WS+ I D +RE VK N+PRYK+VVQV++GQMKDQGVRVASRCLWDT TDNYASV KN +LWCS MVFG+YTE
Sbjct: 1 MNEEPMPGQPIVEVVLPTYIMNPAEDEKFYQSQVKAIAERILKEELEGKEYEENEAKLWSITICDRVREHVKEECNIPRYKVVVQVSLGQMKDQGVRVASRCLWDTNTDNYASVSYKNHTLWCSCMVFGIYTE 133
BLAST of mRNA_S-dermatodea_contig85.16667.1 vs. uniprot
Match: A0A7S3JVI1_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JVI1_9STRA) HSP 1 Score: 168 bits (426), Expect = 1.900e-51 Identity = 78/128 (60.94%), Postives = 99/128 (77.34%), Query Frame = 1
Query: 13 PRRGPPVVEIVLPTYISKPGEEEKFYPSEVKAIAEKAVQAELLDKVYDGEEAKEWSLNIADTIREGVKTLNVPRYKIVVQVTIGQMKDQGVRVASRCLWDTATDNYASVHLKNQSLWCSAMVFGVYTE 396
PR G V+E++LPTY KPGE+EKFYPS+ KAI E ++ L + YD E AKEW NI + I++ VKTLN+PRYK++ Q+TIGQ++DQGV +ASRCLWD A DNYASV+ N SLW +AMVFGVYT+
Sbjct: 11 PRPGQRVIEVILPTYAMKPGEDEKFYPSKAKAICEDILRTTLAGQEYDEELAKEWVTNIGNDIKDKVKTLNIPRYKVICQITIGQVRDQGVSIASRCLWDVAHDNYASVNFSNDSLWANAMVFGVYTD 138
BLAST of mRNA_S-dermatodea_contig85.16667.1 vs. uniprot
Match: A0A7S2FB08_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FB08_9STRA) HSP 1 Score: 168 bits (425), Expect = 3.590e-51 Identity = 86/130 (66.15%), Postives = 100/130 (76.92%), Query Frame = 1
Query: 13 PRRGPPVVEIVLPTYISKPGEEEKFYPSEVKAIAEKAVQAELLDKVYDGEE-AKEWSLNIADTIREGVKT-LNVPRYKIVVQVTIGQMKDQGVRVASRCLWDTATDNYASVHLKNQSLWCSAMVFGVYTE 396
PR G ++E+VLPTYI KP E E FYPS VK IA ++ EL K+YD EE AK+W+ I + I+ VK ++PRYKI+VQVT+GQMKDQGVRVASRCLWDTATDNYASV NQ LWCSAMVFGVYTE
Sbjct: 18 PRPGQSIIEVVLPTYIMKPEETEIFYPSHVKRIAGAILEEELAGKMYDDEEEAKKWNTTICEKIKAQVKAECDIPRYKIIVQVTLGQMKDQGVRVASRCLWDTATDNYASVEYANQHLWCSAMVFGVYTE 147
BLAST of mRNA_S-dermatodea_contig85.16667.1 vs. uniprot
Match: A0A6U3X956_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A6U3X956_9STRA) HSP 1 Score: 166 bits (420), Expect = 2.350e-50 Identity = 82/129 (63.57%), Postives = 102/129 (79.07%), Query Frame = 1
Query: 13 PRRGPPVVEIVLPTYISKPGEEEKFYPSEVKAIAEKAVQAELLDKVYDGEEAKEWSLNIADTIREGVKT-LNVPRYKIVVQVTIGQMKDQGVRVASRCLWDTATDNYASVHLKNQSLWCSAMVFGVYTE 396
PR G PVV++VLPTYI KP E E FYPSE+K IAE V++EL K+YD +++KE ++ I I+E +K N+PRYKIV+QVTIG+MK+QGVRVASRCLWD TDNYASV NQ LWC+AMVFG++TE
Sbjct: 23 PRAGQPVVDVVLPTYIMKPAENEIFYPSEIKKIAEAVVKSELDGKLYDEDDSKESNVLICGKIKERIKEKCNLPRYKIVIQVTIGEMKNQGVRVASRCLWDNITDNYASVQYTNQHLWCTAMVFGIFTE 151
BLAST of mRNA_S-dermatodea_contig85.16667.1 vs. uniprot
Match: F0YJJ5_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YJJ5_AURAN) HSP 1 Score: 162 bits (409), Expect = 6.280e-49 Identity = 77/128 (60.16%), Postives = 96/128 (75.00%), Query Frame = 1
Query: 13 PRRGPPVVEIVLPTYISKPGEEEKFYPSEVKAIAEKAVQAELLDKVYDGEEAKEWSLNIADTIREGVKTLNVPRYKIVVQVTIGQMKDQGVRVASRCLWDTATDNYASVHLKNQSLWCSAMVFGVYTE 396
PR G V+E+VLPTY P E EKFYPSE K I E+ + +L + YD E AKEW L I +TI+ +K+LN+PRYK+VVQVTIGQMKDQGV VASRCLWD + DNYASV+ N++LW + MVF +YT+
Sbjct: 6 PRPGQQVIEVVLPTYSMNPTEVEKFYPSEAKQICERVLTGQLENATYDDESAKEWILLIGNTIKSEIKSLNIPRYKVVVQVTIGQMKDQGVSVASRCLWDISNDNYASVNYTNETLWANVMVFVIYTD 133
BLAST of mRNA_S-dermatodea_contig85.16667.1 vs. uniprot
Match: F0YN77_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YN77_AURAN) HSP 1 Score: 159 bits (401), Expect = 1.070e-47 Identity = 77/130 (59.23%), Postives = 95/130 (73.08%), Query Frame = 1
Query: 7 EEPRRGPPVVEIVLPTYISKPGEEEKFYPSEVKAIAEKAVQAELLDKVYDGEEAKEWSLNIADTIREGVKTLNVPRYKIVVQVTIGQMKDQGVRVASRCLWDTATDNYASVHLKNQSLWCSAMVFGVYTE 396
E PR G V+E+VLPTY P E+E+FYPSE K I E+ + EL +K Y + AK+W ++I +TI+ +K L VPRYKI+VQVTIGQMKDQGV VASRCLWD DNY SV+ N SLW + MVFGVYT+
Sbjct: 5 EGPRPGQQVIEVVLPTYSMIPAEQERFYPSEAKRICERVLVGELDNKEYFEDSAKDWIISIGNTIKSEIKCLTVPRYKIIVQVTIGQMKDQGVSVASRCLWDITFDNYTSVNFTNSSLWANVMVFGVYTD 134
BLAST of mRNA_S-dermatodea_contig85.16667.1 vs. uniprot
Match: A0A6S8SDH5_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A6S8SDH5_9STRA) HSP 1 Score: 155 bits (391), Expect = 3.330e-46 Identity = 75/132 (56.82%), Postives = 98/132 (74.24%), Query Frame = 1
Query: 1 MAEEPRRGPPVVEIVLPTYISKPGEEEKFYPSEVKAIAEKAVQAELLDKVYDGEEAKEWSLNIADTIREGVKTLNVPRYKIVVQVTIGQMKDQGVRVASRCLWDTATDNYASVHLKNQSLWCSAMVFGVYTE 396
M + R G V+EI+LPTY KP E+EKFYPS+++ I +A++ EL +K Y + AK+W L I + I+ K+LN+PRYK++VQVTIGQMKDQGV VASRCLWD DNY SV+ N SLW +AMVFG+YT+
Sbjct: 1 MQDGARPGQQVIEIILPTYSMKPAEDEKFYPSKIRQICTEALKDELDNKEYFEDGAKDWILTIGNKIKAQAKSLNLPRYKVIVQVTIGQMKDQGVSVASRCLWDLLFDNYTSVNYTNSSLWANAMVFGLYTD 132
BLAST of mRNA_S-dermatodea_contig85.16667.1 vs. uniprot
Match: A0A7S3HL07_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HL07_9STRA) HSP 1 Score: 147 bits (372), Expect = 2.580e-43 Identity = 71/131 (54.20%), Postives = 95/131 (72.52%), Query Frame = 1
Query: 10 EPRRGPPVVEIVLPTYISKPGEEEKFYPSEVKAIAEKAVQAELLDKVYDGEEAKEWSLNIADTIREGVKTLNVP--RYKIVVQVTIGQMKDQGVRVASRCLWDTATDNYASVHLKNQSLWCSAMVFGVYTE 396
E G P+++I LPT+ +P E E+F+PS+ KAIA+K + EL VYD E+AK WS+NI+D +RE V P RYK+VVQ TIGQM+DQG+R+ASRCLWD TDNYAS N++L+CS +VF +YT+
Sbjct: 2 EMSNGHPIIDIFLPTFRMEPEEHERFFPSKGKAIADKIISDELNGAVYDEEDAKNWSINISDRVREAVTESMGPNSRYKVVVQTTIGQMRDQGIRIASRCLWDPTTDNYASCSFSNETLFCSCLVFALYTD 132 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig85.16667.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig85.16667.1 >prot_S-dermatodea_contig85.16667.1 ID=prot_S-dermatodea_contig85.16667.1|Name=mRNA_S-dermatodea_contig85.16667.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=133bp MAEEPRRGPPVVEIVLPTYISKPGEEEKFYPSEVKAIAEKAVQAELLDKVback to top mRNA from alignment at S-dermatodea_contig85:34553..35953+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig85.16667.1 ID=mRNA_S-dermatodea_contig85.16667.1|Name=mRNA_S-dermatodea_contig85.16667.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=1401bp|location=Sequence derived from alignment at S-dermatodea_contig85:34553..35953+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig85:34553..35953+ >mRNA_S-dermatodea_contig85.16667.1 ID=mRNA_S-dermatodea_contig85.16667.1|Name=mRNA_S-dermatodea_contig85.16667.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=798bp|location=Sequence derived from alignment at S-dermatodea_contig85:34553..35953+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |