prot_S-dermatodea_contig8499.16665.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig8499.16665.1
Unique Nameprot_S-dermatodea_contig8499.16665.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length192
Homology
BLAST of mRNA_S-dermatodea_contig8499.16665.1 vs. uniprot
Match: D8LKH1_ECTSI (Uracil-DNA glycosylase superfamily protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LKH1_ECTSI)

HSP 1 Score: 130 bits (328), Expect = 1.290e-33
Identity = 62/87 (71.26%), Postives = 69/87 (79.31%), Query Frame = 0
Query:  105 GAQNIKGAGSPLEPVVNADDLVGISRRLHDRLKDKAWRGTSKQPVTCSYNVLEYASEPNEAYTREYGGGRALGRAFVVGMNPGPWGM 191
            G+   +  GS L  V   D+LV ISRRLHD LKD+ W+GTSKQPV+CSYNVLEYASE NEAYT+ YGGGR  GRAFVVGMNPGPWGM
Sbjct:   44 GSAGAEAGGSTL--VSCGDELVRISRRLHDSLKDRKWKGTSKQPVSCSYNVLEYASETNEAYTQRYGGGRPFGRAFVVGMNPGPWGM 128          
BLAST of mRNA_S-dermatodea_contig8499.16665.1 vs. uniprot
Match: A0A2E5UFJ2_9BACT (Single-stranded DNA-binding protein n=1 Tax=Phycisphaerae bacterium TaxID=2026778 RepID=A0A2E5UFJ2_9BACT)

HSP 1 Score: 65.1 bits (157), Expect = 2.150e-9
Identity = 30/68 (44.12%), Postives = 45/68 (66.18%), Query Frame = 0
Query:  125 LVGISRRLHDRLKDKAWRGTSKQPVTCSYNVLEYASEPNEAYTREYGGGRALGRAFVVGMNPGPWGMA 192
            L+ I+++L   +   ++      PVTC YN L+YA +P+EA+ ++YG G   GR  ++GMNPGPWGMA
Sbjct:    5 LIEITKQLAANVNQLSFA----DPVTCVYNPLDYAWKPHEAFLKKYGDGE--GRVLLIGMNPGPWGMA 66          
BLAST of mRNA_S-dermatodea_contig8499.16665.1 vs. uniprot
Match: A0A3N5QI00_9GAMM (Single-strand selective monofunctional uracil-DNA glycosylase n=1 Tax=Xanthomonadales bacterium TaxID=2006849 RepID=A0A3N5QI00_9GAMM)

HSP 1 Score: 59.7 bits (143), Expect = 1.840e-7
Identity = 31/68 (45.59%), Postives = 39/68 (57.35%), Query Frame = 0
Query:  125 LVGISRRLHDRLKDKAWRGTSKQPVTCSYNVLEYASEPNEAYTREYGGGRALGRAFVVGMNPGPWGMA 192
            LV +SR L +R+    +      PV C YN LEYA  P+E Y   YGGG       ++GMNPGP+GMA
Sbjct:    3 LVDVSRALSERVASLRFA----DPVCCVYNPLEYARAPHELYLSRYGGGPK--EVLLLGMNPGPFGMA 64          
BLAST of mRNA_S-dermatodea_contig8499.16665.1 vs. uniprot
Match: A0A257SX93_9GAMM (Single-stranded DNA-binding protein n=1 Tax=Chromatiales bacterium 21-64-14 TaxID=1970504 RepID=A0A257SX93_9GAMM)

HSP 1 Score: 59.3 bits (142), Expect = 2.550e-7
Identity = 32/69 (46.38%), Postives = 39/69 (56.52%), Query Frame = 0
Query:  124 DLVGISRRLHDRLKDKAWRGTSKQPVTCSYNVLEYASEPNEAYTREYGGGRALGRAFVVGMNPGPWGMA 192
            DLV ++RRL   +    +      PVT  YN LEYA  P++ Y R YG G       +VGMNPGPWGMA
Sbjct:    2 DLVIVARRLGTEVAKLRFAA----PVTHVYNPLEYAWRPHQEYLRRYGSGSR--EVVLVGMNPGPWGMA 64          
BLAST of mRNA_S-dermatodea_contig8499.16665.1 vs. uniprot
Match: A0A831RGC5_9GAMM (Single-stranded DNA-binding protein (Fragment) n=1 Tax=Chromatiales bacterium TaxID=2026725 RepID=A0A831RGC5_9GAMM)

HSP 1 Score: 57.0 bits (136), Expect = 1.290e-6
Identity = 32/69 (46.38%), Postives = 37/69 (53.62%), Query Frame = 0
Query:  124 DLVGISRRLHDRLKDKAWRGTSKQPVTCSYNVLEYASEPNEAYTREYGGGRALGRAFVVGMNPGPWGMA 192
            DLV  +RRL   +    +      PVT  YN LEYA  P+  Y R YG G       +VGMNPGPWGMA
Sbjct:    2 DLVTTARRLGAEVAGLRFAA----PVTHVYNPLEYAWAPHRDYLRRYGAGTR--EVILVGMNPGPWGMA 64          
BLAST of mRNA_S-dermatodea_contig8499.16665.1 vs. uniprot
Match: A0A257M482_9BACT (Single-stranded DNA-binding protein n=1 Tax=Verrucomicrobiales bacterium VVV1 TaxID=2015575 RepID=A0A257M482_9BACT)

HSP 1 Score: 57.0 bits (136), Expect = 1.750e-6
Identity = 29/73 (39.73%), Postives = 46/73 (63.01%), Query Frame = 0
Query:  120 VNADDLVGISRRLHDRLKDKAWRGTSKQPVTCSYNVLEYASEPNEAYTREYGGGRALGRAFVVGMNPGPWGMA 192
            ++A  L+ +SR+L   L    +      PV+ +YN L+YA  P+E + + +GGG+   R F++GMNPGP+GMA
Sbjct:    1 MSAAALIDLSRKLSRDLDGFRFSA----PVSHTYNPLDYARAPHELFLKRFGGGKK--RVFLLGMNPGPFGMA 67          
BLAST of mRNA_S-dermatodea_contig8499.16665.1 vs. uniprot
Match: A0A3M1FEK9_9DELT (Single-stranded DNA-binding protein n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A3M1FEK9_9DELT)

HSP 1 Score: 57.0 bits (136), Expect = 1.750e-6
Identity = 32/70 (45.71%), Postives = 39/70 (55.71%), Query Frame = 0
Query:  123 DDLVGISRRLHDRLKDKAWRGTSKQPVTCSYNVLEYASEPNEAYTREYGGGRALGRAFVVGMNPGPWGMA 192
            DD + ISR L     +  + G    PV+  Y  L YA E +EAY R YG  R   R  ++GMNPGPWGMA
Sbjct:    3 DDPITISRWLAKATANLTFSG----PVSLVYRPLHYAWEAHEAYLRRYGAERPR-RVVLLGMNPGPWGMA 67          
BLAST of mRNA_S-dermatodea_contig8499.16665.1 vs. uniprot
Match: A0A2D6YPE2_9BACT (Single-stranded DNA-binding protein n=3 Tax=Planctomycetes TaxID=203682 RepID=A0A2D6YPE2_9BACT)

HSP 1 Score: 57.0 bits (136), Expect = 1.980e-6
Identity = 29/69 (42.03%), Postives = 37/69 (53.62%), Query Frame = 0
Query:  124 DLVGISRRLHDRLKDKAWRGTSKQPVTCSYNVLEYASEPNEAYTREYGGGRALGRAFVVGMNPGPWGMA 192
            D+   +  +  RL     R     PV   YN L+YA  P++AY R Y   R   RA ++GMNPGPWGMA
Sbjct:   13 DVADAAEAISSRLSKDVGRLRFGDPVDVVYNPLDYAWAPHQAYVRRYA--RRGIRALLLGMNPGPWGMA 79          
BLAST of mRNA_S-dermatodea_contig8499.16665.1 vs. uniprot
Match: A0A4Q5XBI8_9DELT (Single-strand selective monofunctional uracil-DNA glycosylase n=1 Tax=Myxococcales bacterium TaxID=2026763 RepID=A0A4Q5XBI8_9DELT)

HSP 1 Score: 56.6 bits (135), Expect = 2.480e-6
Identity = 31/68 (45.59%), Postives = 42/68 (61.76%), Query Frame = 0
Query:  125 LVGISRRLHDRLKDKAWRGTSKQPVTCSYNVLEYASEPNEAYTREYGGGRALGRAFVVGMNPGPWGMA 192
            LV ISR L  ++    +      PV+  YN L YA EP+E Y  ++GGG+   RA ++GMNPGP+GMA
Sbjct:    3 LVRISRELAKQVDGLQFSA----PVSYVYNPLVYAREPHERYLTQWGGGKK--RALLLGMNPGPFGMA 64          
BLAST of mRNA_S-dermatodea_contig8499.16665.1 vs. uniprot
Match: A0A2D7H2U5_9BACT (Single-stranded DNA-binding protein n=1 Tax=Phycisphaerae bacterium TaxID=2026778 RepID=A0A2D7H2U5_9BACT)

HSP 1 Score: 56.6 bits (135), Expect = 2.480e-6
Identity = 27/68 (39.71%), Postives = 43/68 (63.24%), Query Frame = 0
Query:  125 LVGISRRLHDRLKDKAWRGTSKQPVTCSYNVLEYASEPNEAYTREYGGGRALGRAFVVGMNPGPWGMA 192
            L+ I+R L   +   ++     +PV   YN L+YA + + ++ ++YGGG+  GR  ++GMNPGPWGMA
Sbjct:    5 LITITRELSKGVDTLSF----SEPVAFVYNPLKYAWKSHRSFLQKYGGGK--GRVLLIGMNPGPWGMA 66          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig8499.16665.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LKH1_ECTSI1.290e-3371.26Uracil-DNA glycosylase superfamily protein n=2 Tax... [more]
A0A2E5UFJ2_9BACT2.150e-944.12Single-stranded DNA-binding protein n=1 Tax=Phycis... [more]
A0A3N5QI00_9GAMM1.840e-745.59Single-strand selective monofunctional uracil-DNA ... [more]
A0A257SX93_9GAMM2.550e-746.38Single-stranded DNA-binding protein n=1 Tax=Chroma... [more]
A0A831RGC5_9GAMM1.290e-646.38Single-stranded DNA-binding protein (Fragment) n=1... [more]
A0A257M482_9BACT1.750e-639.73Single-stranded DNA-binding protein n=1 Tax=Verruc... [more]
A0A3M1FEK9_9DELT1.750e-645.71Single-stranded DNA-binding protein n=1 Tax=Deltap... [more]
A0A2D6YPE2_9BACT1.980e-642.03Single-stranded DNA-binding protein n=3 Tax=Planct... [more]
A0A4Q5XBI8_9DELT2.480e-645.59Single-strand selective monofunctional uracil-DNA ... [more]
A0A2D7H2U5_9BACT2.480e-639.71Single-stranded DNA-binding protein n=1 Tax=Phycis... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036895Uracil-DNA glycosylase-like domain superfamilyGENE3D3.40.470.10coord: 120..192
e-value: 1.1E-13
score: 52.8

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig8499contigS-dermatodea_contig8499:3378..5198 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig8499.16665.1mRNA_S-dermatodea_contig8499.16665.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig8499 3134..5198 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig8499.16665.1 ID=prot_S-dermatodea_contig8499.16665.1|Name=mRNA_S-dermatodea_contig8499.16665.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=192bp
MASDLSLGLPNARRAEGSAAACNVQESPAGRVSLHFCLSSGAVELKYIAA
TSPQTRVVRATCTTCSGGERRMSTKRRSSRPQEDQASKAAGKRPKVIERS
TPAVGAQNIKGAGSPLEPVVNADDLVGISRRLHDRLKDKAWRGTSKQPVT
CSYNVLEYASEPNEAYTREYGGGRALGRAFVVGMNPGPWGMA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036895Uracil-DNA_glycosylase-like_sf