mRNA_S-dermatodea_contig8496.16664.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig8496.16664.1 vs. uniprot
Match: D8LF15_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LF15_ECTSI) HSP 1 Score: 145 bits (367), Expect = 2.400e-39 Identity = 71/85 (83.53%), Postives = 79/85 (92.94%), Query Frame = 1
Query: 1 MSEKRRRSSLLQDLVNKRALEDEAQTASIDTDPWRLASFGVLDLLRKLVEHRGVDVNAKDDRGMPPIVWAIRNGHEEVASYLLDK 255
MSEKRRRSSLLQDLVNKRA E E Q A+ID+DPWRLASFGV+DLL+KLVE G+DVNAKDDRGMPPI+WAIR+GHEEVA+YLLDK
Sbjct: 1 MSEKRRRSSLLQDLVNKRASEGEEQAANIDSDPWRLASFGVIDLLKKLVEEGGIDVNAKDDRGMPPIIWAIRSGHEEVATYLLDK 85
BLAST of mRNA_S-dermatodea_contig8496.16664.1 vs. uniprot
Match: A0A7S2D3I5_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2D3I5_9STRA) HSP 1 Score: 77.8 bits (190), Expect = 1.270e-13 Identity = 32/63 (50.79%), Postives = 48/63 (76.19%), Query Frame = 1
Query: 61 EDEAQTASIDTDPWRLASFGVLDLLRKLVEHRGVDVNAKDDRGMPPIVWAIRNGHEEVASYLL 249
E + A++D+D +LA+FG+LD+L+KLVE G DVN+ DD+ P++WAIRNGH++V YL+
Sbjct: 3 EGGVEVATVDSDIHKLAAFGILDILKKLVEEEGADVNSLDDQKCAPLIWAIRNGHKDVTKYLI 65
BLAST of mRNA_S-dermatodea_contig8496.16664.1 vs. uniprot
Match: A0A836CKL3_9STRA (Ankyrin repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKL3_9STRA) HSP 1 Score: 71.2 bits (173), Expect = 2.430e-11 Identity = 40/103 (38.83%), Postives = 59/103 (57.28%), Query Frame = 1
Query: 13 RRRSSLLQDLVNKRALEDEAQTASIDTDPWRLASFGVLDLLRKLVEHRGVDVNAKDDRGMPPIVWA---------------------IRNG-HEEVASYLLDK 255
RRRSS+L + KR D ++ A++D+DPWRLASFG++DLL+ +E +G V+ D RGM P++W +R+G HE V S LL++
Sbjct: 3 RRRSSVLDMMKEKRRSADASRVAAVDSDPWRLASFGMVDLLKVQMEKKGAQVDQVDQRGMTPLLWGEFDADNMVDAVCRVWSRMTPPLRSGSHEAVVSLLLER 105
BLAST of mRNA_S-dermatodea_contig8496.16664.1 vs. uniprot
Match: A0A6S9F9Q9_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9F9Q9_HETAK) HSP 1 Score: 71.2 bits (173), Expect = 3.780e-11 Identity = 36/69 (52.17%), Postives = 46/69 (66.67%), Query Frame = 1
Query: 49 KRALEDEAQT-ASIDTDPWRLASFGVLDLLRKLVEHRGVDVNAKDDRGMPPIVWAIRNGHEEVASYLLD 252
K L+D +T A ID P RLA+ G+LDLL+K E +VNA DDRG P++WA RNGH EV YL++
Sbjct: 8 KSVLDDVEKTQADIDNQPHRLAANGILDLLKKYFEAHEDEVNAVDDRGCTPLIWAARNGHIEVVKYLVE 76
BLAST of mRNA_S-dermatodea_contig8496.16664.1 vs. uniprot
Match: A0A7S2V3X0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V3X0_9STRA) HSP 1 Score: 69.7 bits (169), Expect = 9.580e-11 Identity = 31/68 (45.59%), Postives = 46/68 (67.65%), Query Frame = 1
Query: 49 KRALEDEAQTASIDTDPWRLASFGVLDLLRKLVEHRGVDVNAKDDRGMPPIVWAIRNGHEEVASYLLD 252
K +++E + A+ID+DP+RLA+FG++DLL+K ++N D G +VWA RNGH VA YL+D
Sbjct: 5 KAEVKEEPEAAAIDSDPFRLAAFGIIDLLKKYFGENMEEINQTDKLGCTALVWACRNGHLSVAEYLVD 72
BLAST of mRNA_S-dermatodea_contig8496.16664.1 vs. uniprot
Match: A0A2R5GNV3_9STRA (Ankyrin repeat domain-containing protein 1 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GNV3_9STRA) HSP 1 Score: 61.6 bits (148), Expect = 8.440e-8 Identity = 29/73 (39.73%), Postives = 48/73 (65.75%), Query Frame = 1
Query: 43 VNKRALEDEAQTASIDTDPWRLASFGVLDLLRKLVEHRG--VDVNAKDDRGMPPIVWAIRNGHEEVASYLLDK 255
++K+ D+ Q I+++PW+LA G + L+ LVE VDVNA+DD G PI+WA R+G+ + +YL+++
Sbjct: 1 MSKKKGGDKDQVPEIESNPWKLAGIGDVAALKGLVEREKDPVDVNAEDDYGCQPIIWAARSGYVDAVTYLVEQ 73
BLAST of mRNA_S-dermatodea_contig8496.16664.1 vs. uniprot
Match: A0A6G0XGK3_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XGK3_9STRA) HSP 1 Score: 58.9 bits (141), Expect = 9.020e-7 Identity = 30/76 (39.47%), Postives = 46/76 (60.53%), Query Frame = 1
Query: 46 NKRALEDEAQTASIDTDPWRLASFGVLDLLRKLVEH--------RGVDVNAKDDRGMPPIVWAIRNGHEEVASYLL 249
NK A + + +DT+P++LA+ G L +L+ LVE + +D+NAKD G P++WA RNG+ EV YL+
Sbjct: 4 NKAAALTKHEMPEVDTNPFKLAAVGNLQILKTLVEPSKEGGNQGKTIDINAKDIYGCTPMIWAARNGYYEVFEYLI 79
BLAST of mRNA_S-dermatodea_contig8496.16664.1 vs. uniprot
Match: A0A5D6YE88_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YE88_9STRA) HSP 1 Score: 56.6 bits (135), Expect = 5.590e-6 Identity = 29/70 (41.43%), Postives = 42/70 (60.00%), Query Frame = 1
Query: 67 EAQTASIDTDPWRLASFGVLDLLRKLVEHRG---------VDVNAKDDRGMPPIVWAIRNGHEEVASYLL 249
+ + IDT+P+++A+ G L LLR LVE ++VNAKD G P+VWA RNG+ +V YL+
Sbjct: 6 KVEVPEIDTNPFKMAAVGNLQLLRALVEPEANADGKAPAPLNVNAKDPYGCTPLVWAARNGYVDVLDYLV 75
BLAST of mRNA_S-dermatodea_contig8496.16664.1 vs. uniprot
Match: K3WJY8_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WJY8_GLOUD) HSP 1 Score: 55.1 bits (131), Expect = 3.080e-5 Identity = 29/66 (43.94%), Postives = 40/66 (60.61%), Query Frame = 1
Query: 85 IDTDPWRLASFGVLDLLRKLVEHRG-----------VDVNAKDDRGMPPIVWAIRNGHEEVASYLL 249
IDT+P+++AS G L LL+ LVE ++VNAKD G P++WA RNG+ EV YL+
Sbjct: 98 IDTNPFKMASVGNLQLLQTLVEPSASTAEGVKPAVPLNVNAKDPYGCTPLIWAARNGYVEVMDYLV 163
BLAST of mRNA_S-dermatodea_contig8496.16664.1 vs. uniprot
Match: A0A0W8DMQ0_PHYNI (26S proteasome non-ATPase regulatory subunit 10 n=13 Tax=Phytophthora TaxID=4783 RepID=A0A0W8DMQ0_PHYNI) HSP 1 Score: 54.3 bits (129), Expect = 3.520e-5 Identity = 27/65 (41.54%), Postives = 41/65 (63.08%), Query Frame = 1
Query: 85 IDTDPWRLASFGVLDLLRKLVEHRG---------VDVNAKDDRGMPPIVWAIRNGHEEVASYLLD 252
+DT+P+++A+ G L LL+ LVE + +++NAKD G P+VWA RNG+ EV YL +
Sbjct: 12 VDTNPFKMAAVGNLQLLKTLVESQENADGKTPAPLNLNAKDPYGCTPLVWAARNGYLEVVDYLAE 76 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig8496.16664.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 12
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig8496.16664.1 >prot_S-dermatodea_contig8496.16664.1 ID=prot_S-dermatodea_contig8496.16664.1|Name=mRNA_S-dermatodea_contig8496.16664.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=249bp MSEKRRRSSLLQDLVNKRALEDEAQTASIDTDPWRLASFGVLDLLRKLVEback to top mRNA from alignment at S-dermatodea_contig8496:2624..5966- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig8496.16664.1 ID=mRNA_S-dermatodea_contig8496.16664.1|Name=mRNA_S-dermatodea_contig8496.16664.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=3343bp|location=Sequence derived from alignment at S-dermatodea_contig8496:2624..5966- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig8496:2624..5966- >mRNA_S-dermatodea_contig8496.16664.1 ID=mRNA_S-dermatodea_contig8496.16664.1|Name=mRNA_S-dermatodea_contig8496.16664.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=1494bp|location=Sequence derived from alignment at S-dermatodea_contig8496:2624..5966- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |