mRNA_S-dermatodea_contig8496.16664.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-dermatodea_contig8496.16664.1
Unique NamemRNA_S-dermatodea_contig8496.16664.1
TypemRNA
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Homology
BLAST of mRNA_S-dermatodea_contig8496.16664.1 vs. uniprot
Match: D8LF15_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LF15_ECTSI)

HSP 1 Score: 145 bits (367), Expect = 2.400e-39
Identity = 71/85 (83.53%), Postives = 79/85 (92.94%), Query Frame = 1
Query:    1 MSEKRRRSSLLQDLVNKRALEDEAQTASIDTDPWRLASFGVLDLLRKLVEHRGVDVNAKDDRGMPPIVWAIRNGHEEVASYLLDK 255
            MSEKRRRSSLLQDLVNKRA E E Q A+ID+DPWRLASFGV+DLL+KLVE  G+DVNAKDDRGMPPI+WAIR+GHEEVA+YLLDK
Sbjct:    1 MSEKRRRSSLLQDLVNKRASEGEEQAANIDSDPWRLASFGVIDLLKKLVEEGGIDVNAKDDRGMPPIIWAIRSGHEEVATYLLDK 85          
BLAST of mRNA_S-dermatodea_contig8496.16664.1 vs. uniprot
Match: A0A7S2D3I5_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2D3I5_9STRA)

HSP 1 Score: 77.8 bits (190), Expect = 1.270e-13
Identity = 32/63 (50.79%), Postives = 48/63 (76.19%), Query Frame = 1
Query:   61 EDEAQTASIDTDPWRLASFGVLDLLRKLVEHRGVDVNAKDDRGMPPIVWAIRNGHEEVASYLL 249
            E   + A++D+D  +LA+FG+LD+L+KLVE  G DVN+ DD+   P++WAIRNGH++V  YL+
Sbjct:    3 EGGVEVATVDSDIHKLAAFGILDILKKLVEEEGADVNSLDDQKCAPLIWAIRNGHKDVTKYLI 65          
BLAST of mRNA_S-dermatodea_contig8496.16664.1 vs. uniprot
Match: A0A836CKL3_9STRA (Ankyrin repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKL3_9STRA)

HSP 1 Score: 71.2 bits (173), Expect = 2.430e-11
Identity = 40/103 (38.83%), Postives = 59/103 (57.28%), Query Frame = 1
Query:   13 RRRSSLLQDLVNKRALEDEAQTASIDTDPWRLASFGVLDLLRKLVEHRGVDVNAKDDRGMPPIVWA---------------------IRNG-HEEVASYLLDK 255
            RRRSS+L  +  KR   D ++ A++D+DPWRLASFG++DLL+  +E +G  V+  D RGM P++W                      +R+G HE V S LL++
Sbjct:    3 RRRSSVLDMMKEKRRSADASRVAAVDSDPWRLASFGMVDLLKVQMEKKGAQVDQVDQRGMTPLLWGEFDADNMVDAVCRVWSRMTPPLRSGSHEAVVSLLLER 105          
BLAST of mRNA_S-dermatodea_contig8496.16664.1 vs. uniprot
Match: A0A6S9F9Q9_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9F9Q9_HETAK)

HSP 1 Score: 71.2 bits (173), Expect = 3.780e-11
Identity = 36/69 (52.17%), Postives = 46/69 (66.67%), Query Frame = 1
Query:   49 KRALEDEAQT-ASIDTDPWRLASFGVLDLLRKLVEHRGVDVNAKDDRGMPPIVWAIRNGHEEVASYLLD 252
            K  L+D  +T A ID  P RLA+ G+LDLL+K  E    +VNA DDRG  P++WA RNGH EV  YL++
Sbjct:    8 KSVLDDVEKTQADIDNQPHRLAANGILDLLKKYFEAHEDEVNAVDDRGCTPLIWAARNGHIEVVKYLVE 76          
BLAST of mRNA_S-dermatodea_contig8496.16664.1 vs. uniprot
Match: A0A7S2V3X0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V3X0_9STRA)

HSP 1 Score: 69.7 bits (169), Expect = 9.580e-11
Identity = 31/68 (45.59%), Postives = 46/68 (67.65%), Query Frame = 1
Query:   49 KRALEDEAQTASIDTDPWRLASFGVLDLLRKLVEHRGVDVNAKDDRGMPPIVWAIRNGHEEVASYLLD 252
            K  +++E + A+ID+DP+RLA+FG++DLL+K       ++N  D  G   +VWA RNGH  VA YL+D
Sbjct:    5 KAEVKEEPEAAAIDSDPFRLAAFGIIDLLKKYFGENMEEINQTDKLGCTALVWACRNGHLSVAEYLVD 72          
BLAST of mRNA_S-dermatodea_contig8496.16664.1 vs. uniprot
Match: A0A2R5GNV3_9STRA (Ankyrin repeat domain-containing protein 1 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GNV3_9STRA)

HSP 1 Score: 61.6 bits (148), Expect = 8.440e-8
Identity = 29/73 (39.73%), Postives = 48/73 (65.75%), Query Frame = 1
Query:   43 VNKRALEDEAQTASIDTDPWRLASFGVLDLLRKLVEHRG--VDVNAKDDRGMPPIVWAIRNGHEEVASYLLDK 255
            ++K+   D+ Q   I+++PW+LA  G +  L+ LVE     VDVNA+DD G  PI+WA R+G+ +  +YL+++
Sbjct:    1 MSKKKGGDKDQVPEIESNPWKLAGIGDVAALKGLVEREKDPVDVNAEDDYGCQPIIWAARSGYVDAVTYLVEQ 73          
BLAST of mRNA_S-dermatodea_contig8496.16664.1 vs. uniprot
Match: A0A6G0XGK3_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XGK3_9STRA)

HSP 1 Score: 58.9 bits (141), Expect = 9.020e-7
Identity = 30/76 (39.47%), Postives = 46/76 (60.53%), Query Frame = 1
Query:   46 NKRALEDEAQTASIDTDPWRLASFGVLDLLRKLVEH--------RGVDVNAKDDRGMPPIVWAIRNGHEEVASYLL 249
            NK A   + +   +DT+P++LA+ G L +L+ LVE         + +D+NAKD  G  P++WA RNG+ EV  YL+
Sbjct:    4 NKAAALTKHEMPEVDTNPFKLAAVGNLQILKTLVEPSKEGGNQGKTIDINAKDIYGCTPMIWAARNGYYEVFEYLI 79          
BLAST of mRNA_S-dermatodea_contig8496.16664.1 vs. uniprot
Match: A0A5D6YE88_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YE88_9STRA)

HSP 1 Score: 56.6 bits (135), Expect = 5.590e-6
Identity = 29/70 (41.43%), Postives = 42/70 (60.00%), Query Frame = 1
Query:   67 EAQTASIDTDPWRLASFGVLDLLRKLVEHRG---------VDVNAKDDRGMPPIVWAIRNGHEEVASYLL 249
            + +   IDT+P+++A+ G L LLR LVE            ++VNAKD  G  P+VWA RNG+ +V  YL+
Sbjct:    6 KVEVPEIDTNPFKMAAVGNLQLLRALVEPEANADGKAPAPLNVNAKDPYGCTPLVWAARNGYVDVLDYLV 75          
BLAST of mRNA_S-dermatodea_contig8496.16664.1 vs. uniprot
Match: K3WJY8_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WJY8_GLOUD)

HSP 1 Score: 55.1 bits (131), Expect = 3.080e-5
Identity = 29/66 (43.94%), Postives = 40/66 (60.61%), Query Frame = 1
Query:   85 IDTDPWRLASFGVLDLLRKLVEHRG-----------VDVNAKDDRGMPPIVWAIRNGHEEVASYLL 249
            IDT+P+++AS G L LL+ LVE              ++VNAKD  G  P++WA RNG+ EV  YL+
Sbjct:   98 IDTNPFKMASVGNLQLLQTLVEPSASTAEGVKPAVPLNVNAKDPYGCTPLIWAARNGYVEVMDYLV 163          
BLAST of mRNA_S-dermatodea_contig8496.16664.1 vs. uniprot
Match: A0A0W8DMQ0_PHYNI (26S proteasome non-ATPase regulatory subunit 10 n=13 Tax=Phytophthora TaxID=4783 RepID=A0A0W8DMQ0_PHYNI)

HSP 1 Score: 54.3 bits (129), Expect = 3.520e-5
Identity = 27/65 (41.54%), Postives = 41/65 (63.08%), Query Frame = 1
Query:   85 IDTDPWRLASFGVLDLLRKLVEHRG---------VDVNAKDDRGMPPIVWAIRNGHEEVASYLLD 252
            +DT+P+++A+ G L LL+ LVE +          +++NAKD  G  P+VWA RNG+ EV  YL +
Sbjct:   12 VDTNPFKMAAVGNLQLLKTLVESQENADGKTPAPLNLNAKDPYGCTPLVWAARNGYLEVVDYLAE 76          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig8496.16664.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 12
Match NameE-valueIdentityDescription
D8LF15_ECTSI2.400e-3983.53Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S2D3I5_9STRA1.270e-1350.79Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A836CKL3_9STRA2.430e-1138.83Ankyrin repeat-containing domain protein n=1 Tax=T... [more]
A0A6S9F9Q9_HETAK3.780e-1152.17Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2V3X0_9STRA9.580e-1145.59Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
A0A2R5GNV3_9STRA8.440e-839.73Ankyrin repeat domain-containing protein 1 n=1 Tax... [more]
A0A6G0XGK3_9STRA9.020e-739.47Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A5D6YE88_9STRA5.590e-641.43Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
K3WJY8_GLOUD3.080e-543.94Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A0W8DMQ0_PHYNI3.520e-541.5426S proteasome non-ATPase regulatory subunit 10 n=... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig8496contigS-dermatodea_contig8496:2624..5966 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score146.7
Seed ortholog evalue1.4e-32
Seed eggNOG ortholog2880.D8LF15
EggNOG free text desc.response to abiotic stimulus
EggNOG OGsCOG0666@1,KOG4177@2759
COG Functional cat.G
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionAnkyrin-repeat protein
Ec32 orthologEc-21_006340.1
Exons5
Model size747
Cds size747
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig8496.16664.1prot_S-dermatodea_contig8496.16664.1Saccorhiza dermatodea SderLu1190fm monoicouspolypeptideS-dermatodea_contig8496 2624..5966 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622925347.1940846-CDS-S-dermatodea_contig8496:2623..28221622925347.1940846-CDS-S-dermatodea_contig8496:2623..2822Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8496 2624..2822 -
1694079871.9373975-CDS-S-dermatodea_contig8496:2623..28221694079871.9373975-CDS-S-dermatodea_contig8496:2623..2822Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8496 2624..2822 -
1622925347.2056751-CDS-S-dermatodea_contig8496:3478..36411622925347.2056751-CDS-S-dermatodea_contig8496:3478..3641Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8496 3479..3641 -
1694079871.9501035-CDS-S-dermatodea_contig8496:3478..36411694079871.9501035-CDS-S-dermatodea_contig8496:3478..3641Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8496 3479..3641 -
1622925347.2168496-CDS-S-dermatodea_contig8496:4425..45951622925347.2168496-CDS-S-dermatodea_contig8496:4425..4595Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8496 4426..4595 -
1694079871.969671-CDS-S-dermatodea_contig8496:4425..45951694079871.969671-CDS-S-dermatodea_contig8496:4425..4595Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8496 4426..4595 -
1622925347.22607-CDS-S-dermatodea_contig8496:5239..53791622925347.22607-CDS-S-dermatodea_contig8496:5239..5379Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8496 5240..5379 -
1694079871.9894624-CDS-S-dermatodea_contig8496:5239..53791694079871.9894624-CDS-S-dermatodea_contig8496:5239..5379Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8496 5240..5379 -
1622925347.243021-CDS-S-dermatodea_contig8496:5891..59661622925347.243021-CDS-S-dermatodea_contig8496:5891..5966Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8496 5892..5966 -
1694079872.0002203-CDS-S-dermatodea_contig8496:5891..59661694079872.0002203-CDS-S-dermatodea_contig8496:5891..5966Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8496 5892..5966 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-dermatodea_contig8496.16664.1

>prot_S-dermatodea_contig8496.16664.1 ID=prot_S-dermatodea_contig8496.16664.1|Name=mRNA_S-dermatodea_contig8496.16664.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=249bp
MSEKRRRSSLLQDLVNKRALEDEAQTASIDTDPWRLASFGVLDLLRKLVE
HRGVDVNAKDDRGMPPIVWAIRNGHEEVASYLLDKGADVESFGYAGMRAL
HHACSNSHEGCIALLLDRGADANAADEYGNTPLHYAACRGVLNIIVRLLS
SGAEPEVANIQGSTPLHKACVFGQNAVVKKLVEKGSEVGRGDKDDNTPLH
VAARSGFGSLVSLLLDLGAPMQVANKAGKEPRSLALDASVADLLEGPS*
back to top

mRNA from alignment at S-dermatodea_contig8496:2624..5966-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-dermatodea_contig8496.16664.1 ID=mRNA_S-dermatodea_contig8496.16664.1|Name=mRNA_S-dermatodea_contig8496.16664.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=3343bp|location=Sequence derived from alignment at S-dermatodea_contig8496:2624..5966- (Saccorhiza dermatodea SderLu1190fm monoicous)
ATGTCCGAGAAGAGAAGAAGGTCATCTCTGCTGCAGGACCTGGTGAATAA GAGGGCTTTGGAAGATGAAGCACAGGTGTGTTAACTATCACATATTTAAT GCAGAAATCGAGAGTGATATTTAAAATGTACTTGCTCGTACCGAGGGCAG GAAGTTGGTTGAGTCGGATACGGACGGGACATCGACGTCGGTCGGCCTCC CATCGCAGCAGCCCGAAATTTTTTTTCACCGAAACGATTGAGCGCTCTTG CCAGTACGATCTTCTGATCGCACTTCAAAAGCATCGCTAGATTAGTCTTG GGGTTGCGTGTGGTTCGCCGTTGCATCATATGGTGGAAGTGCTACATCGT ATGCTGCCGGAAACTGGTGGGCAAAAAATCAGATAACGCGGCCGCTCTTT CTCTTATCGTCGCTCGGATTCATCATGCACATGTACATTGTATGATGCAG CAGTACCATTTGATTGAGGTATCATATGATATCCACTTTGTCGACCGCAA CAAAGCGATTTAAAGGCACCAACGTCCATTATTGACACTACTTCCTTTCC TTACACGAACCGATCTGTCCGATGGGCGCGCTCTCAGACGGCGAGCATCG ATACCGATCCTTGGCGATTGGCAAGCTTCGGAGTTTTGGATCTGCTGAGG AAGCTGGTGGAACATCGCGGCGTGGACGTAAACGCCAAAGACGACAGGGG AATGCCACCCATCGTCTGGGCCATAAGGTGAGCGCAGGGCGTGCACGTGT GATTCGCATTCGCCCTCGCCTAAGTACTAGGTCTCCTGCGTGGACCTTCA ACATACTGGGGGTAGACGGGAGTAATACTGTATTGTTCGGGATTCTTTGT CATGCGAATCTCTATGCATAATTGTAGCTCGTTGATACTGATGTATGTGT AGATTGTCGAAAGATACAGCGACGTAGGGGCCGCCCGCCTTAGTGATCAT GTATCGCATCGACTCAGCTCCAGAGTCTAGACAAAGGGCCTGTCCCGACA AGTTATGGATTGTACCAGTTCTCTGTGTTCTGTTCCTATGTTATAAAAAA AAAACGATCCACCTCCTCTCTGTTCGAGGTGGGCTATAGCACGCAATCGC GGAAACGAAGTATTGAGCTGTAAAAAGTGTGCCATTTATATTTATTTCCG ATAAAACCAAATCGAAATAAACTATGATATGTACATCAATCGGTCGAAGC TGGGAGGACTGACTGATGAGCAGCGATCCTCGTCCATCCTGCTCTACCTC GCACGGGCTTCGGGCTTGACGTTGATTTCGTCCCCTTTCCAGCAACTACA TTTTTCCCGAAGCGTGGGTGTAAAAAACATTATGCTTGTCGTGCCTCGTT GAACGATCGCTCGTCACCCAGGAATGGGCACGAAGAGGTTGCCTCCTATC TGCTGGACAAAGGGGCGGACGTGGAGTCCTTCGGGTACGCTGGAATGAGG GCCCTGCACCACGCGTGCAGCAACTCTCACGAAGGGTGCATTGCTCTCCT TCTGGATAGGGGTGCCGACGCTAACGCCGCTGACGAATACGGTGAGATGT GATGTGTGCTATTTTATCTTATTAATTAAAGCAACAATGACTGATTGTGT ATGTATATTGATTTTAGACAAGGATGCTGTCTGATGCCAAACAACTTGAT GGTTGTGTTGAGCGATGTTTTTTTTATAAAAGCGAAAACACAGCAGCGAC ACGCACAGCAGCGACACGCACAGTATAGCTCGACCGCGTTCGACCTCTGG GTCGCGTTCCGTCGGCACATCGGCCTGCCAACGCACACCTCACACGGGCG TACCCGTGGGCTACCCACTAGTTAATACTAGTACTTGTAGTATAATACTA ATATATTAATACTTGTAGCCATTGGACGTTTCGAGAAATCGTGGTGTGCG TCAGTATTATACACACACTCGCCTTGTTCTTCGTTTATACTACTGCACTC GCCTTAGAACTGGGGAGTCGCCTGACCCATGTTCTACTACTATGACGGAT ATTATGTTATTTCGGGCGGCCGATGAGACATCATCTCAGTTTTATTTACA AAAACAAATGTATCCGGGTCCTGTCCCGATGAGAGGTATAAATATATATA TGGTTTGTGACACTTTCTTAGTTATGCTTATGAAATTTAAAAACACCAAC AACAGGCCATCGCTGCAGTGCCGAGTGGCCAAGGATCCTTGACGCTTACC ATGCCCGTCGCAGGGTAGGCAACACTAACCAGTAATAGCATCCTCACTCA CATGTATATGTCAATATTCGCTTCATGGTCTGACGAGCGCTCCTCGCCTT TTCATCTGCCCGACACAATCTCTAGGCAATACCCCTCTCCACTACGCGGC GTGTAGGGGCGTTCTAAACATTATCGTTCGGCTCTTGAGCAGCGGGGCGG AACCAGAGGTGGCCAACATACAGGGGTCTACGCCGTTGCACAAGGCCTGC GTGTTCGGCCAGAATGCGGTCGTCAAGAAGCTTGTCGAGTGAGTCACACA CGAGCTTCACTCCCTCACCCTGCGCTTCAAAAGTGCTCCTGGGCTGTAAG AAAAACCTTGCTCATCTACTACCATGTATAGGTAAAAAGGGTGATACGTA AAACCTAGCAGAGATGGAGACGTGCGACGTGTACACCCAATTGTTAACTG AGTGAGCGGTGGCTAAATCTTGGGTTAGGATCGCCTGAGAAAGACAAATA AGCAATTCCGTGACTCCTTCAGACGAAGCTCCCGACCCCCCCCCCCACCC CCCCACCCCCCCACCCCCGACCCCCCCTCGCGCACGGGGCCCGCTACATA GAGCGCTGCATTTTTCAGGCCCCGGTCACTAATAGCCGAAGTAACAACAG GGCCAGGAGCGAGAGATGTTTGCCACCGAAACAACTTCTACAGACTCGCT GTACTTCCCAGGTGTCACAATTGGCGAGGGCTCTTAGGCTTCGCCCAACG CTTGCTCCATGTATTTTCTTCTTTAGGGCTCTTAGGCCTGATACCATACT GTTTGCCAAAACGACCACAAAGAACAATCCGCATGTCAGATTCAAACGAC CAAAAGAGCCCTGATGCCCGAGCCCACACGCCCCCCTCCGCCCCCCCCCA CCACGACCTCCACGACCACCACCTCTTTCTTGCTGGGGAAGCAGGAAGGG GTCGGAGGTCGGGCGAGGGGACAAGGACGATAACACTCCTTTGCATGTCG CCGCACGGAGCGGATTTGGATCTCTGGTTTCGCTGCTGCTCGACCTTGGC GCACCCATGCAAGTGGCAAACAAGGCTGGGAAAGAACCGAGGAGTCTCGC CCTTGATGCCTCCGTCGCCGATCTCCTCGAAGGTCCATCATAA
back to top

Coding sequence (CDS) from alignment at S-dermatodea_contig8496:2624..5966-

>mRNA_S-dermatodea_contig8496.16664.1 ID=mRNA_S-dermatodea_contig8496.16664.1|Name=mRNA_S-dermatodea_contig8496.16664.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=1494bp|location=Sequence derived from alignment at S-dermatodea_contig8496:2624..5966- (Saccorhiza dermatodea SderLu1190fm monoicous)
ATGTCCGAGAAGAGAAGAAGGTCATCTCTGCTGCAGGACCTGGTGAATAA
GAGGGCTTTGGAAGATGAAGCACAGATGTCCGAGAAGAGAAGAAGGTCAT
CTCTGCTGCAGGACCTGGTGAATAAGAGGGCTTTGGAAGATGAAGCACAG
ACGGCGAGCATCGATACCGATCCTTGGCGATTGGCAAGCTTCGGAGTTTT
GGATCTGCTGAGGAAGCTGGTGGAACATCGCGGCGTGGACGTAAACGCCA
AAGACGACAGGGGAATGCCACCCATCGTCTGGGCCATAAGACGGCGAGCA
TCGATACCGATCCTTGGCGATTGGCAAGCTTCGGAGTTTTGGATCTGCTG
AGGAAGCTGGTGGAACATCGCGGCGTGGACGTAAACGCCAAAGACGACAG
GGGAATGCCACCCATCGTCTGGGCCATAAGGAATGGGCACGAAGAGGTTG
CCTCCTATCTGCTGGACAAAGGGGCGGACGTGGAGTCCTTCGGGTACGCT
GGAATGAGGGCCCTGCACCACGCGTGCAGCAACTCTCACGAAGGGTGCAT
TGCTCTCCTTCTGGATAGGGGTGCCGACGCTAACGCCGCTGACGAATACG
GAATGGGCACGAAGAGGTTGCCTCCTATCTGCTGGACAAAGGGGCGGACG
TGGAGTCCTTCGGGTACGCTGGAATGAGGGCCCTGCACCACGCGTGCAGC
AACTCTCACGAAGGGTGCATTGCTCTCCTTCTGGATAGGGGTGCCGACGC
TAACGCCGCTGACGAATACGGCAATACCCCTCTCCACTACGCGGCGTGTA
GGGGCGTTCTAAACATTATCGTTCGGCTCTTGAGCAGCGGGGCGGAACCA
GAGGTGGCCAACATACAGGGGTCTACGCCGTTGCACAAGGCCTGCGTGTT
CGGCCAGAATGCGGTCGTCAAGAAGCTTGTCGAGCAATACCCCTCTCCAC
TACGCGGCGTGTAGGGGCGTTCTAAACATTATCGTTCGGCTCTTGAGCAG
CGGGGCGGAACCAGAGGTGGCCAACATACAGGGGTCTACGCCGTTGCACA
AGGCCTGCGTGTTCGGCCAGAATGCGGTCGTCAAGAAGCTTGTCGAGAAG
GGGTCGGAGGTCGGGCGAGGGGACAAGGACGATAACACTCCTTTGCATGT
CGCCGCACGGAGCGGATTTGGATCTCTGGTTTCGCTGCTGCTCGACCTTG
GCGCACCCATGCAAGTGGCAAACAAGGCTGGGAAAGAACCGAGGAGTCTC
GCCCTTGATGCCTCCGTCGCCGATCTCCTCGAAGGTCCATCATAAGAAGG
GGTCGGAGGTCGGGCGAGGGGACAAGGACGATAACACTCCTTTGCATGTC
GCCGCACGGAGCGGATTTGGATCTCTGGTTTCGCTGCTGCTCGACCTTGG
CGCACCCATGCAAGTGGCAAACAAGGCTGGGAAAGAACCGAGGAGTCTCG
CCCTTGATGCCTCCGTCGCCGATCTCCTCGAAGGTCCATCATAA
back to top