prot_S-dermatodea_contig84920.16660.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig84920.16660.1
Unique Nameprot_S-dermatodea_contig84920.16660.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length74
Homology
BLAST of mRNA_S-dermatodea_contig84920.16660.1 vs. uniprot
Match: UPI0018CC4A9C (uncharacterized protein DDB_G0289975-like n=2 Tax=Hermetia illucens TaxID=343691 RepID=UPI0018CC4A9C)

HSP 1 Score: 61.6 bits (148), Expect = 2.350e-9
Identity = 31/71 (43.66%), Postives = 42/71 (59.15%), Query Frame = 0
Query:    1 NYKRLNDITVIPRVSHVHIDELLDSLGERQSVFNFRLLAGFMQNAIDPGSIEKTALVTPSGLYHWLRMPRG 71
            +Y++LN++TV  +    +ID +LD LG  Q  F   L  G+ Q  I     EKTA VTP GLY ++RMP G
Sbjct:  602 DYRKLNEVTVDDKFPLPNIDSILDKLGRAQYFFTLDLAKGYHQILIKEQDREKTAFVTPHGLYEFIRMPFG 672          
BLAST of mRNA_S-dermatodea_contig84920.16660.1 vs. uniprot
Match: A0A4C1SQL8_EUMVA (Retrovirus-related Pol polyprotein from transposon 17.6 n=1 Tax=Eumeta variegata TaxID=151549 RepID=A0A4C1SQL8_EUMVA)

HSP 1 Score: 59.7 bits (143), Expect = 1.120e-8
Identity = 30/71 (42.25%), Postives = 42/71 (59.15%), Query Frame = 0
Query:    1 NYKRLNDITVIPRVSHVHIDELLDSLGERQSVFNFRLLAGFMQNAIDPGSIEKTALVTPSGLYHWLRMPRG 71
            +Y++LN+IT+  +    +ID +LD LG  Q      L  G+ Q  I+    EKTA VTP GLY ++RMP G
Sbjct:  295 DYRKLNEITIDDKFPLPNIDSILDKLGRAQYFTTLDLAKGYHQILIEEKDREKTAFVTPHGLYEFIRMPFG 365          
BLAST of mRNA_S-dermatodea_contig84920.16660.1 vs. uniprot
Match: A0A2Z6RIT0_9GLOM (Uncharacterized protein n=2 Tax=Rhizophagus clarus TaxID=94130 RepID=A0A2Z6RIT0_9GLOM)

HSP 1 Score: 59.7 bits (143), Expect = 1.140e-8
Identity = 32/73 (43.84%), Postives = 43/73 (58.90%), Query Frame = 0
Query:    1 NYKRLNDITVIPRVSHVHIDELLDSLGERQSVFNFRLLAGFMQNAIDPGSIEKTALVTPSGLYHWLRMPRGAS 73
            +Y++LN IT         ID+LL+S G+ +      L +G+ Q A+D   IEKTA VTP GLY +L MP G S
Sbjct:  904 DYRKLNAITKADAYPLPRIDDLLESFGQAKWFTTLDLASGYWQVAMDEADIEKTAFVTPFGLYEFLVMPFGLS 976          
BLAST of mRNA_S-dermatodea_contig84920.16660.1 vs. uniprot
Match: A0A4C1SN68_EUMVA (Retrovirus-related Pol polyprotein from transposon 297 n=1 Tax=Eumeta variegata TaxID=151549 RepID=A0A4C1SN68_EUMVA)

HSP 1 Score: 58.2 bits (139), Expect = 3.870e-8
Identity = 30/71 (42.25%), Postives = 41/71 (57.75%), Query Frame = 0
Query:    1 NYKRLNDITVIPRVSHVHIDELLDSLGERQSVFNFRLLAGFMQNAIDPGSIEKTALVTPSGLYHWLRMPRG 71
            +Y++LN+IT+  +    +ID +LD LG  Q      L  G+ Q  I     EKTA VTP GLY ++RMP G
Sbjct:  189 DYRKLNEITIDDKFPLPNIDSILDKLGRAQYFTTLDLAKGYHQILIREKDREKTAFVTPHGLYEFIRMPFG 259          
BLAST of mRNA_S-dermatodea_contig84920.16660.1 vs. uniprot
Match: A0A015L6B7_RHIIW (Gag-pol fusion protein n=1 Tax=Rhizophagus irregularis (strain DAOM 197198w) TaxID=1432141 RepID=A0A015L6B7_RHIIW)

HSP 1 Score: 55.8 bits (133), Expect = 9.900e-8
Identity = 28/71 (39.44%), Postives = 40/71 (56.34%), Query Frame = 0
Query:    1 NYKRLNDITVIPRVSHVHIDELLDSLGERQSVFNFRLLAGFMQNAIDPGSIEKTALVTPSGLYHWLRMPRG 71
            +Y++LN +T         ID++L+S           L +G+ Q A+DP  IEKTA +TP GLY +L MP G
Sbjct:   33 DYRKLNAVTKADAYPLPRIDDMLESFSNATWFTTLDLASGYWQVAMDPADIEKTAFITPFGLYKFLVMPFG 103          
BLAST of mRNA_S-dermatodea_contig84920.16660.1 vs. uniprot
Match: A0A803K5N9_XENTR (Ribonuclease H n=8 Tax=Xenopus tropicalis TaxID=8364 RepID=A0A803K5N9_XENTR)

HSP 1 Score: 57.0 bits (136), Expect = 1.020e-7
Identity = 28/71 (39.44%), Postives = 40/71 (56.34%), Query Frame = 0
Query:    1 NYKRLNDITVIPRVSHVHIDELLDSLGERQSVFNFRLLAGFMQNAIDPGSIEKTALVTPSGLYHWLRMPRG 71
            +Y+RLND+T         +DELLD LG  + +    L  G+ Q  + P + EK+A +TP GLY +  MP G
Sbjct: 1125 DYRRLNDVTTTDAYPMPRVDELLDRLGNAKYLTTLDLSRGYWQIPLAPSAQEKSAFLTPFGLYQFTTMPFG 1195          
BLAST of mRNA_S-dermatodea_contig84920.16660.1 vs. uniprot
Match: UPI001C1B92AB (Hypothetical protein n=1 Tax=Rhizophagus irregularis TaxID=588596 RepID=UPI001C1B92AB)

HSP 1 Score: 55.8 bits (133), Expect = 1.070e-7
Identity = 27/71 (38.03%), Postives = 40/71 (56.34%), Query Frame = 0
Query:    1 NYKRLNDITVIPRVSHVHIDELLDSLGERQSVFNFRLLAGFMQNAIDPGSIEKTALVTPSGLYHWLRMPRG 71
            +Y++LN +T         ID++L+S           L +G+ Q A+DP  +EKTA +TP GLY +L MP G
Sbjct:    9 DYRKLNAVTKADAYPLPRIDDMLESFSNATWFTTLDLASGYWQVAMDPADVEKTAFITPFGLYEFLVMPFG 79          
BLAST of mRNA_S-dermatodea_contig84920.16660.1 vs. uniprot
Match: K7EZI4_PELSI (Ribonuclease H n=1 Tax=Pelodiscus sinensis TaxID=13735 RepID=K7EZI4_PELSI)

HSP 1 Score: 56.6 bits (135), Expect = 1.330e-7
Identity = 28/74 (37.84%), Postives = 43/74 (58.11%), Query Frame = 0
Query:    1 NYKRLNDITVIPRVSHVHIDELLDSLGERQSVFNFRLLAGFMQNAIDPGSIEKTALVTPSGLYHWLRMPRGASG 74
            +++++N I+          DELL+ LG+ + +    L  G+ Q  +D  S EKTA  TPSGL+H++RMP G  G
Sbjct:   44 DFRKVNAISKFDAYPMPRTDELLERLGKAKFITTLDLTKGYWQIPLDRESQEKTAFTTPSGLFHFVRMPFGLHG 117          
BLAST of mRNA_S-dermatodea_contig84920.16660.1 vs. uniprot
Match: K7F184_PELSI (Ribonuclease H n=1 Tax=Pelodiscus sinensis TaxID=13735 RepID=K7F184_PELSI)

HSP 1 Score: 56.6 bits (135), Expect = 1.340e-7
Identity = 28/74 (37.84%), Postives = 43/74 (58.11%), Query Frame = 0
Query:    1 NYKRLNDITVIPRVSHVHIDELLDSLGERQSVFNFRLLAGFMQNAIDPGSIEKTALVTPSGLYHWLRMPRGASG 74
            +++++N I+          DELL+ LG+ + +    L  G+ Q  +D  S EKTA  TPSGL+H++RMP G  G
Sbjct:  126 DFRKVNAISKFDAYPMPRTDELLERLGKAKFITTLDLTKGYWQIPLDRESQEKTAFTTPSGLFHFVRMPFGLHG 199          
BLAST of mRNA_S-dermatodea_contig84920.16660.1 vs. uniprot
Match: A0A158P4I8_TETUR (RNA-directed DNA polymerase n=1 Tax=Tetranychus urticae TaxID=32264 RepID=A0A158P4I8_TETUR)

HSP 1 Score: 56.6 bits (135), Expect = 1.400e-7
Identity = 30/71 (42.25%), Postives = 44/71 (61.97%), Query Frame = 0
Query:    1 NYKRLNDITVIPRVSHVHIDELLDSLGERQSVFNFRLLAGFMQNAIDPGSIEKTALVTPSGLYHWLRMPRG 71
            +Y++LN+ITV  +    +I + LDSL   +      L +G+ Q A+DP   +KTA VTPSGLY + R+P G
Sbjct:  727 DYRKLNEITVKDKFPLPNIQDYLDSLQGMKYFSLLDLRSGYHQMAMDPLDQQKTAFVTPSGLYEYTRLPFG 797          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig84920.16660.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI0018CC4A9C2.350e-943.66uncharacterized protein DDB_G0289975-like n=2 Tax=... [more]
A0A4C1SQL8_EUMVA1.120e-842.25Retrovirus-related Pol polyprotein from transposon... [more]
A0A2Z6RIT0_9GLOM1.140e-843.84Uncharacterized protein n=2 Tax=Rhizophagus clarus... [more]
A0A4C1SN68_EUMVA3.870e-842.25Retrovirus-related Pol polyprotein from transposon... [more]
A0A015L6B7_RHIIW9.900e-839.44Gag-pol fusion protein n=1 Tax=Rhizophagus irregul... [more]
A0A803K5N9_XENTR1.020e-739.44Ribonuclease H n=8 Tax=Xenopus tropicalis TaxID=83... [more]
UPI001C1B92AB1.070e-738.03Hypothetical protein n=1 Tax=Rhizophagus irregular... [more]
K7EZI4_PELSI1.330e-737.84Ribonuclease H n=1 Tax=Pelodiscus sinensis TaxID=1... [more]
K7F184_PELSI1.340e-737.84Ribonuclease H n=1 Tax=Pelodiscus sinensis TaxID=1... [more]
A0A158P4I8_TETUR1.400e-742.25RNA-directed DNA polymerase n=1 Tax=Tetranychus ur... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.70.270coord: 14..41
e-value: 4.8E-12
score: 47.7
NoneNo IPR availableGENE3D3.10.10.10coord: 1..72
e-value: 4.8E-12
score: 47.7
NoneNo IPR availableSUPERFAMILY56672DNA/RNA polymerasescoord: 1..72

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig84920contigS-dermatodea_contig84920:478..699 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig84920.16660.1mRNA_S-dermatodea_contig84920.16660.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig84920 478..699 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig84920.16660.1 ID=prot_S-dermatodea_contig84920.16660.1|Name=mRNA_S-dermatodea_contig84920.16660.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=74bp
NYKRLNDITVIPRVSHVHIDELLDSLGERQSVFNFRLLAGFMQNAIDPGS
IEKTALVTPSGLYHWLRMPRGASG
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