prot_S-dermatodea_contig8488.16653.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig8488.16653.1
Unique Nameprot_S-dermatodea_contig8488.16653.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length290
Homology
BLAST of mRNA_S-dermatodea_contig8488.16653.1 vs. uniprot
Match: D8LLC8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LLC8_ECTSI)

HSP 1 Score: 361 bits (927), Expect = 2.790e-118
Identity = 213/302 (70.53%), Postives = 234/302 (77.48%), Query Frame = 0
Query:    1 MGRKKKFIDKKESSTFHVVHRSQQDKAQEGEEEASEFVLIPSGPSRDNK----RAAEGKGKSDEASLREQRDHINALGLPNDGYDYEQHLKSMGGGTFVSKTGKVQHFAEGNA-GARGGG-RVTLPEEALPSEETLDRQLEAVTISEKVMDGDLRRALAAGLADVGEEGSEDDEGEGGNLLDDDFVLQAAGAEDGEGFDFDAHVARLMEASAHETGLRQRTAADDLQTKGLQRLRRDGDEESASEXXXXXXXXXXX----SGEFDETLLEGLDLGGEGASRAAA--EGGSDERAVLDAQFEA 290
            MGRKKKFIDKKES+TFHVVHRSQQDKA EGEEEASEFVLIPSGP RD++    R A GKGK        +RDHINALGLPNDGYDY+QHLKSMGGGTFVSKTGKVQHFAEGN+ GARGGG +  +PEEALPS ETLDRQLEAVTISEKVMDGD+RRALAAGLADVGEE  +D+     N+LDDDFV+QAAGA +  GFDFDAHVARLMEASA ETGLRQR+  DDLQTKGL RLRRD D ES                  SGE D+ LLEGLD+ G  A+      EG  ++RAVLD+QFEA
Sbjct:    1 MGRKKKFIDKKESTTFHVVHRSQQDKANEGEEEASEFVLIPSGPPRDSRPQDERKAAGKGKGKGGVAGAERDHINALGLPNDGYDYDQHLKSMGGGTFVSKTGKVQHFAEGNSQGARGGGAKPAIPEEALPSGETLDRQLEAVTISEKVMDGDMRRALAAGLADVGEEDWDDES----NMLDDDFVVQAAGAGEDGGFDFDAHVARLMEASAKETGLRQRSRDDDLQTKGLVRLRRDSDSESDDSEDDVATLDGGAGSDDSGEIDDALLEGLDISGAAAAGGGVPGEGTEEDRAVLDSQFEA 298          
BLAST of mRNA_S-dermatodea_contig8488.16653.1 vs. uniprot
Match: A0A7S0XBG0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0XBG0_9STRA)

HSP 1 Score: 131 bits (329), Expect = 1.350e-31
Identity = 89/214 (41.59%), Postives = 115/214 (53.74%), Query Frame = 0
Query:    4 KKKFIDKKESSTFHVVHRSQQDKAQEGEEEASEFVLIPSGPSR-DNKR------AAEGKGKSDEASLREQRDHINALGLPNDGYDYEQHLKSMGGGTFVSKTGKVQHFAEGNAGARGGGRVTLPEEALPSEETLDRQLEAVTISEKVMDGDLRRALAAGLADVGEEGSEDDEGEGGNLLDDDFVLQAAGAEDGEGFDFDAHVARLMEASAHETG 210
            KK FI K E  T+HVVHRSQ D A   EE+ S++VLIP+  S  DN+R      +       D      + DHIN LG  NDGYDY +H+K + GG F+   G++               + +PE+ LPS E  DR LEA+ IS+K MD D+R AL         +G ED E E    LDDDFV+Q     +   FDFDAH+ARL+  S  + G
Sbjct:    3 KKPFIKKSEGQTYHVVHRSQTDSAYANEEKPSDYVLIPAQLSNNDNRRKFKDNQSVYSNNSIDFKQFTRKGDHINHLGFKNDGYDYSKHIKVVDGGKFIGLNGELLERPVVK-------EIEIPEDLLPSAEEFDRNLEAIVISDKYMDDDIRNALDF-------DGDEDGEFE---ELDDDFVIQVMAEPEVPDFDFDAHIARLIANSEKDLG 199          
BLAST of mRNA_S-dermatodea_contig8488.16653.1 vs. uniprot
Match: A0A7S0XBI8_9STRA (Hypothetical protein n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0XBI8_9STRA)

HSP 1 Score: 131 bits (329), Expect = 6.000e-31
Identity = 89/214 (41.59%), Postives = 115/214 (53.74%), Query Frame = 0
Query:    4 KKKFIDKKESSTFHVVHRSQQDKAQEGEEEASEFVLIPSGPSR-DNKR------AAEGKGKSDEASLREQRDHINALGLPNDGYDYEQHLKSMGGGTFVSKTGKVQHFAEGNAGARGGGRVTLPEEALPSEETLDRQLEAVTISEKVMDGDLRRALAAGLADVGEEGSEDDEGEGGNLLDDDFVLQAAGAEDGEGFDFDAHVARLMEASAHETG 210
            KK FI K E  T+HVVHRSQ D A   EE+ S++VLIP+  S  DN+R      +       D      + DHIN LG  NDGYDY +H+K + GG F+   G++               + +PE+ LPS E  DR LEA+ IS+K MD D+R AL         +G ED E E    LDDDFV+Q     +   FDFDAH+ARL+  S  + G
Sbjct:    3 KKPFIKKSEGQTYHVVHRSQTDSAYANEEKPSDYVLIPAQLSNNDNRRKFKDNQSVYSNNSIDFKQFTRKGDHINHLGFKNDGYDYSKHIKVVDGGKFIGLNGELLERPVVK-------EIEIPEDLLPSAEEFDRNLEAIVISDKYMDDDIRNALDF-------DGDEDGEFE---ELDDDFVIQVMAEPEVPDFDFDAHIARLIANSEKDLG 199          
BLAST of mRNA_S-dermatodea_contig8488.16653.1 vs. uniprot
Match: A0A836CIF2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIF2_9STRA)

HSP 1 Score: 123 bits (309), Expect = 5.220e-28
Identity = 107/283 (37.81%), Postives = 138/283 (48.76%), Query Frame = 0
Query:    4 KKKFIDKKESSTFHVVHRSQQDKAQ-EGEE-EASEFVLIPSGPSRDNKRAAEGKGKSDE--------ASLREQRDHINALG----------------------LPNDG--YDYEQHLKSMGGGTFVSKTGKVQHFAEGNAGARGGGRVTLPEEALPSEE-TLDRQLEAVTISEKVMDGDLRRALAAGLADVGE-----------------------------EGSEDDEGEGGNLLDDDFVLQAAG--AEDGEGFDFDAHVARLMEASAHETGLRQRTAADDL 220
            KKKFI+  + +T+ +VHRSQ DKA  EG+E +ASEFVL+P+G  +  + A    G ++         A     R+HINA                        LP+DG  YDYE HLK+MGGGTF++K G+V         AR G R  LP E+LP+EE  + R L A+TIS+KVMD D+                                          E  ++ E       +DDFVLQAAG   +D  GFDFDAH+ARL+ AS  E GLR R A DD 
Sbjct:    3 KKKFIESGKGTTYRLVHRSQLDKAAAEGDEGDASEFVLVPAGEIKQRRIATRRNGGTNAQHGSGGGGARYTVAREHINAFXXXXXXXXXXXXXXXXXXXXXXXLPDDGTGYDYESHLKTMGGGTFINKEGRVGSVPL-PGDAREGRRAVLPAESLPAEEGEVARNLAAITISDKVMDDDMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEEFDELEXXXXXXXEDDFVLQAAGDGGDDDGGFDFDAHIARLIAASEREVGLRPRGADDDF 284          
BLAST of mRNA_S-dermatodea_contig8488.16653.1 vs. uniprot
Match: A0A6A4EL32_9STRA (Uncharacterized protein n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A4EL32_9STRA)

HSP 1 Score: 121 bits (303), Expect = 1.990e-27
Identity = 99/258 (38.37%), Postives = 134/258 (51.94%), Query Frame = 0
Query:    1 MGRKKKFIDKKESSTFHVVHRSQQDKAQEGEEEASEFVLIPSG------------------------------PSRDNKRAAEGKGKSDEASLR-------------EQRDHINALGLPNDGYDYEQHLKSMGGGTFVSKTGKVQHFAEGNAGARGGGRVTLPEEALPSEETLDRQLEAVTISEKVMDGDLRRALAAGLADVGEEGSEDDEGEGGNLLDDDFVLQAA--GAEDG--EGFDFDAHVARLMEASAHETGL 211
            M RKK+FIDKK +  FHVVHRSQ+D  +  + EAS++VL+ S                               P   + ++ + K KS  +S R             E  D ++  GLP DGYDY QH+K MG G F S T +     E  A +R   +V LPE+ALPS E  DR L+A+T++  VMD DLR AL      V +E  E+        LDD+FV+QAA   A+D   + FD+DAH+A+LMEA++  T L
Sbjct:    1 MVRKKQFIDKKSAQHFHVVHRSQRD-PKANDPEASKYVLLSSSQHVELRSDSESDDEYEDDGGDSELDSDDEMPDLVDTKSTKPKKKSSSSSGRAAFPVRKVRFGGVEAEDLVDENGLPRDGYDYSQHMKEMGQGKFYSATSRFDAGEEARALSR---KVDLPEDALPSAEEQDRLLDAITLTTDVMDEDLREAL------VNDEAFEE--------LDDNFVVQAAEQNADDAGTDDFDYDAHIAKLMEAASGVTPL 240          
BLAST of mRNA_S-dermatodea_contig8488.16653.1 vs. uniprot
Match: A0A3F2RYW0_9STRA (Uncharacterized protein n=4 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RYW0_9STRA)

HSP 1 Score: 118 bits (296), Expect = 3.260e-26
Identity = 93/245 (37.96%), Postives = 122/245 (49.80%), Query Frame = 0
Query:    2 GRKKKFIDKKESSTFHVVHRSQQDKAQEGEEEASEFVLIPS-------------------------------GPSRDNKRAAEGKGKSDEASLR------EQRDHINALGLPNDGYDYEQHLKSMGGGTFVSKTGKVQHFAEGNAGARGGGRVTLPEEALPSEETLDRQLEAVTISEKVMDGDLRRALAAGLADVGEEGSEDDEGEGGNLLDDDFVLQAAGAEDGEG----FDFDAHVARLMEAS 205
            GRKK+FI+KK +  +HVVHRSQ+D  +  + EAS++VL+ S                                P         GKGK    + +      E  D ++  GLP DGYDY QH+K MG G F S T +     E  A +R    V LPE+ALPS E  +R L+A+T++  VMD DLR AL  G A                 LDD+FVLQAA   + EG    FD+DAH+A+LMEA+
Sbjct:  342 GRKKQFINKKTAQHYHVVHRSQRD-PRANDPEASKYVLLSSTQQDVELRSDSEYEDSELDSDDEMPDLVDTPAPKAKTSLKPTGKGKIAFPTRKVRFGSVEAEDLVDENGLPRDGYDYAQHMKEMGHGKFYSATSRFDASEESRAMSR---HVELPEDALPSGEEQERLLDAITLTTDVMDEDLREALVNGGAF--------------EELDDNFVLQAAEENEAEGATDDFDYDAHIAKLMEAA 568          
BLAST of mRNA_S-dermatodea_contig8488.16653.1 vs. uniprot
Match: H3GXQ9_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GXQ9_PHYRM)

HSP 1 Score: 117 bits (294), Expect = 3.490e-26
Identity = 96/244 (39.34%), Postives = 127/244 (52.05%), Query Frame = 0
Query:    3 RKKKFIDKKESSTFHVVHRSQQDKAQEGEEEASEFVLIPSG-------------------------------PSRDNKRAAEGKGKSDEASLREQRDHINALGLPNDGYDYEQHLKSMGGGTFVSKTGKVQHFAEGNAGARGGGRVTLPEEALPSEETLDRQLEAVTISEKVMDGDLRRALAAGLADVGEEGSEDDEGEGGNLLDDDFVLQAA--GAEDG--EGFDFDAHVARLMEASAHETGL 211
            RKK+FI+KK +  FHVVHRSQ+D  +  + EAS++VL+ S                                PS   K  A    +       E  D ++  GLP DGYDY QH+K MG G F S T +     E  A +R   +V LPE+ALPS E  DR L+A+T++  VMD DLR AL      V +E  E+        LDD+FV+QAA   AED   + FD+DAH+A+LMEA++  T L
Sbjct:   21 RKKQFINKKTAQHFHVVHRSQRD-PKANDPEASKYVLLSSSQHVELRSDSESDDDXXXXXXXXXXXXXLVDAPSAPKKSKAAFPVRKVRFGGVEAEDLVDENGLPRDGYDYTQHMKEMGQGKFYSATSRFDAGEEARALSR---KVDLPEDALPSVEEQDRLLDAITLTTDVMDVDLREAL------VNDEAFEE--------LDDNFVVQAAEDNAEDAGTDDFDYDAHIAKLMEAASGVTPL 246          
BLAST of mRNA_S-dermatodea_contig8488.16653.1 vs. uniprot
Match: A0A5D6YF69_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YF69_9STRA)

HSP 1 Score: 114 bits (284), Expect = 7.560e-25
Identity = 92/249 (36.95%), Postives = 128/249 (51.41%), Query Frame = 0
Query:    1 MGRKKKFIDKKESSTFHVVHRSQQDKAQEGEEEASEFVLIPS-------------------------------GPSRDNKRAAEGKGKSDEASLR-------EQRDHINALGLPNDGYDYEQHLKSMGGGTFVSKTGKVQHFAEGNAGARGGGRVTLPEEALPSEETLDRQLEAVTISEKVMDGDLRRALAAGLADVGEEGSEDDEGEGGNLLDDDFVLQAAGAE-----DGEGFDFDAHVARLMEASA 206
            MG+KK+FI+KK +  FHVVHRSQ+D     + +AS++VL+ S                                P+   KRAA+    +    +R       E  D ++  G+  DGYDY QH+K MG G F S  G+   F+  +  AR   RV LP + LPS E  DR L+A+T++  VMD DLR AL      V  E  E+        +DDDF+ QAA A+     D +GFD+DAH+A+LMEA++
Sbjct:    1 MGKKKQFINKKTAQHFHVVHRSQRDPLA-NDPDASKYVLLSSKNQVEIEFRSDNEDDSDDEMPELISSPRTAAAPTAATKRAAKANAGASAFPVRRVRFGDYEAEDLVDENGMVRDGYDYTQHMKEMGKGKFYSADGQ---FSPQSELAR---RVELPADVLPSAEEQDRLLDAITLTTDVMDDDLREAL------VNAEAFEE--------MDDDFMAQAAQADPENRADADGFDYDAHIAKLMEAAS 228          
BLAST of mRNA_S-dermatodea_contig8488.16653.1 vs. uniprot
Match: W7TKL0_9STRA (Low temperature viability protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TKL0_9STRA)

HSP 1 Score: 114 bits (284), Expect = 8.640e-25
Identity = 95/234 (40.60%), Postives = 129/234 (55.13%), Query Frame = 0
Query:    4 KKKFIDKKESSTFHVVHRSQQDKAQEGEEEASEFVLIPSGPSRDNKRAAEGKGKSDEASLREQ----RDHINALGLPNDGYDYEQHLKSMGGGTFVSKTGK-VQHFAEGNAG--ARGGG----RVTLPEEALPS-EETLDRQLEAVTISEKVMDGDLRRALAAGLADVGEEGSEDDEGEGGNLLDDDFVLQAA-----------GAEDGEG----FDFDAHVARLMEASAHETG 210
            +K+FID   S  F+VVHRSQ+D A   + +AS++VL+P       +  A  +G++ E S RE+    RDHIN LGLPNDGY+Y +HLK+MGGG F++ +G+ VQ    G     A+G G    R+   E   P  EE L   ++A+T+S   MD +L RAL     + GEE  E   G G   L+DDF+LQA            G  DG G    FDF+AH+A L+  S    G
Sbjct:    5 RKRFIDPANSQHFYVVHRSQRD-ANGDDPKASQYVLLPG-----RRGNAADRGEATEPSQREKDIRWRDHINELGLPNDGYNYGRHLKTMGGGRFIAASGEIVQARTRGGVYQLAQGSGLQDERIAGDEGVAPCREERLKPVVDAITLSADCMDEELERALFGSDTEDGEEKVEGVRGCG--ELNDDFILQAGKEPKEDLDEEDGEVDGNGGGDKFDFEAHMAMLIAKSEKSLG 230          
BLAST of mRNA_S-dermatodea_contig8488.16653.1 vs. uniprot
Match: A0A484EID0_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484EID0_BRELC)

HSP 1 Score: 113 bits (283), Expect = 1.090e-24
Identity = 89/243 (36.63%), Postives = 128/243 (52.67%), Query Frame = 0
Query:    2 GRKKKFIDKKESSTFHVVHRSQQDKAQEGEEEASEFVLIPSG----------------------------PSRDNKRAAEGKGKSDEASLR------EQRDHINALGLPNDGYDYEQHLKSMGGGTFVSKTGKVQHFAEGNAGARGGGRVTLPEEALPSEETLDRQLEAVTISEKVMDGDLRRALAAGLADVGEEGSEDDEGEGGNLLDDDFVLQAA----GAEDGEGFDFDAHVARLMEASA 206
            GRKK+FIDKK +  +HVVHRSQ+D  +  + +AS+FVL+ S                             P++ + +      KSD    +      E  D ++  GLP DGY+Y QH+K MG G F S T +     E  + +R   +V LPE ALPS +  DR L+A+T++  VMD DLR AL      V +E  E+        LDD+FV+QAA      ED + FD++AH+A+LM+A++
Sbjct:   27 GRKKQFIDKKTAQHYHVVHRSQRD-PKANDPDASKFVLLSSSQHVELHSEPDDEDSELDSDDDMPSLIDTPAKTSNKLKVKLRKSDFPVRKVCFGGVEAEDLVDENGLPRDGYNYSQHMKEMGQGKFYSATSRFDAGEEARSLSR---KVDLPEGALPSIDEQDRMLDAITLTTNVMDEDLREAL------VNDEAFEE--------LDDNFVIQAAEENVDQEDVDDFDYEAHIAKLMDAAS 251          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig8488.16653.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LLC8_ECTSI2.790e-11870.53Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S0XBG0_9STRA1.350e-3141.59Hypothetical protein (Fragment) n=1 Tax=Chromulina... [more]
A0A7S0XBI8_9STRA6.000e-3141.59Hypothetical protein n=1 Tax=Chromulina nebulosa T... [more]
A0A836CIF2_9STRA5.220e-2837.81Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6A4EL32_9STRA1.990e-2738.37Uncharacterized protein n=4 Tax=Phytophthora TaxID... [more]
A0A3F2RYW0_9STRA3.260e-2637.96Uncharacterized protein n=4 Tax=Phytophthora kerno... [more]
H3GXQ9_PHYRM3.490e-2639.34Uncharacterized protein n=1 Tax=Phytophthora ramor... [more]
A0A5D6YF69_9STRA7.560e-2536.95Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
W7TKL0_9STRA8.640e-2540.60Low temperature viability protein n=2 Tax=Monodops... [more]
A0A484EID0_BRELC1.090e-2436.63Uncharacterized protein n=1 Tax=Bremia lactucae Ta... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007307Low temperature viability protein Ltv1PFAMPF04180LTVcoord: 9..243
e-value: 1.6E-17
score: 64.4
IPR007307Low temperature viability protein Ltv1PANTHERPTHR21531LOW-TEMPERATURE VIABILITY PROTEIN LTV1-RELATEDcoord: 1..263
NoneNo IPR availablePANTHERPTHR21531:SF0PROTEIN LTV1 HOMOLOGcoord: 1..263

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig8488contigS-dermatodea_contig8488:3418..8767 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig8488.16653.1mRNA_S-dermatodea_contig8488.16653.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig8488 3356..8767 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig8488.16653.1 ID=prot_S-dermatodea_contig8488.16653.1|Name=mRNA_S-dermatodea_contig8488.16653.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=290bp
MGRKKKFIDKKESSTFHVVHRSQQDKAQEGEEEASEFVLIPSGPSRDNKR
AAEGKGKSDEASLREQRDHINALGLPNDGYDYEQHLKSMGGGTFVSKTGK
VQHFAEGNAGARGGGRVTLPEEALPSEETLDRQLEAVTISEKVMDGDLRR
ALAAGLADVGEEGSEDDEGEGGNLLDDDFVLQAAGAEDGEGFDFDAHVAR
LMEASAHETGLRQRTAADDLQTKGLQRLRRDGDEESASESEADSDAGSDA
SGEFDETLLEGLDLGGEGASRAAAEGGSDERAVLDAQFEA
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007307Ltv1