prot_S-dermatodea_contig8487.16652.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig8487.16652.1
Unique Nameprot_S-dermatodea_contig8487.16652.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length504
Homology
BLAST of mRNA_S-dermatodea_contig8487.16652.1 vs. uniprot
Match: D7G7J9_ECTSI (Apt1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7J9_ECTSI)

HSP 1 Score: 426 bits (1096), Expect = 2.750e-136
Identity = 291/572 (50.87%), Postives = 334/572 (58.39%), Query Frame = 0
Query:    4 QAAINSLQLKLIVTVASEVLVSPLP--VLRMLKKSRGSVGNPAVPGKRD-STGENPTAMGLGGVG------PAAXXXXXXXXXXXXXXXXXXXXXXTVTKAWAAKRRAGWETLEVGRTCGSCLFEGARR------------SGVRAFTAWLHVCWLSPPSTSLARSVSASERLRKAVRALKQKLQQRPNTHLALHLKRLKLELWRDESSCPFLRAEVRRVNADVMVYDDSSGSLDLQVGSLWASQVRGTGH--ADGATLWGDDSTD-----------------------------------AASEWWRAXXXGESGR----QQTLIALEVVKPLMPQDLERLSDQGNLRGWTPREITVHVQAQLGSPIGDMTLIRHFEAAAFPLVVHLRRSLFADLSAFASDALSALLSGGAAGDSGALQREEQARKNGTHIKASFLTSKKTAAKPGKSGFGRSRLRRSWRGTKGTAAAPSTPGPGPTTGGRPRSISGPDGGSGGXXTAGEVAGPSNEWDSASDVGEYAVRFDVSLNR--------ACTCKGCMEDTTPME-DEAGIMEKPMAVKHLRLGEV 504
            QAA+NSLQL+L+ TV SEVL SPLP  VL MLK +  S G     G +D  +G   +A   GGV       P A                      TV  +WA +R+A WETLE  R     +   A R            + V   T W  +C L        RS+ ASE LRKAVR LKQKLQQRPNTHLALHLKRLKLELWRDES+ PFLRAEVRRV ADVMVYDDSSGS+DLQVGSLWASQVRG G+  A+ A                                             AS+WWRA   G +      QQTL+ALEVVKPLM QDLERLSDQGNLRGW+PREITVHVQ QLGSPIG++TL+RHFEAA FPLV+HLRRSLF DLSAF+S+A++AL S GA  DSGA QREEQ       IKASFLTS+K   K G+SG GRSRLRRSW+G   +A +  TPGP       P + S    G GG   +G V G +   DSASDVG+  V   +   R        A    G  ED +  + DEAG+M KPMAVKHLRLGEV
Sbjct:  177 QAALNSLQLRLVATVVSEVLASPLPPVVLAMLKATGSSTG---ATGNQDWGSGRRSSAADGGGVAEGMEDDPVAPGSSHGRNWRGMRARAFMRPPPTVASSWATQRQADWETLEGKRWVKERIVPRAARLLPFLCFALSAMTPVFVRTRWCALCHLRRARVLCCRSMLASELLRKAVRLLKQKLQQRPNTHLALHLKRLKLELWRDESNAPFLRAEVRRVTADVMVYDDSSGSVDLQVGSLWASQVRGCGYNPAEAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEERGASDWWRAGEGGPADAARAGQQTLMALEVVKPLMRQDLERLSDQGNLRGWSPREITVHVQIQLGSPIGEVTLVRHFEAAVFPLVLHLRRSLFTDLSAFSSEAVAALSSAGAV-DSGATQREEQ-------IKASFLTSRKAKTKQGRSGLGRSRLRRSWKGKSSSATSSVTPGP-------PAAASAVGSGRGGRARSGSVGGYTATVDSASDVGDAGVDDLLESGRVSQHGSTAAAAVPGAKEDASTRDADEAGVMAKPMAVKHLRLGEV 730          
BLAST of mRNA_S-dermatodea_contig8487.16652.1 vs. uniprot
Match: A0A6H5KUC4_9PHAE (Apt1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUC4_9PHAE)

HSP 1 Score: 252 bits (644), Expect = 1.200e-69
Identity = 193/420 (45.95%), Postives = 220/420 (52.38%), Query Frame = 0
Query:  144 SLARSVSASERLRKAVRALKQKLQQRPNTHLALHLKRLKLELWRDESSCPFLRAEVRRVNADVMVYDDSSGSLDLQVGSLWASQVRGTGHADGATLW-----------GDDSTD----------------------------AASEWWRAXXXGESGR----QQTLIALEVVKPLMPQDLERLSDQGNLRGWTPREITVHVQAQLGSPIG------DMTLIRHFEAAAFPLVVHLRRSLFADLSAFASDALSALLSGGAAGDSGALQREEQARKNGTHIKASFLTSKKTAAKPGKSGFGRSRLRRSWRGTKGTAAAPSTPGPGPTTGGRPRSISGPDGGSGGXXTAGEVAGPSNEWDSASDVGEYAVRFDVSLNR---------ACTCKGCMEDTTPME-DEAGIMEKPMAVKHLRLGEV 504
            S  RS+ ASE LRKAVR LKQKLQQRPNTHL LHLKRLKLELWRDESS PFLRAEVRRV ADVMVYDDSSGS+DLQVGSLWASQVRG G++                 G  ST                              AS+WWRA   G +      QQTL+ALEVVKPL+ QDLERLSDQ      + R ++        +  G      +MTL+RHFEAA FPLV+HLRRSLF DLSAF+S+A++AL S G   DSGA QREEQ       IKASFLTS+KT  K G+SG                                             XX                +VG+  V   +   R         A    G  ED +  + DEAG+M KPMAVKHLRLGEV
Sbjct:  830 SSRRSMLASELLRKAVRLLKQKLQQRPNTHLVLHLKRLKLELWRDESSTPFLRAEVRRVTADVMVYDDSSGSVDLQVGSLWASQVRGCGYSPAEAAXXXXXXXXXXXXGXXSTPLSPTQTGRQGKKTRGLAAAATKEEGEERGASDWWRAGEWGPADAARAGQQTLMALEVVKPLLRQDLERLSDQARE---SARLVSSRNHCARANKTGVSYRRVEMTLVRHFEAAVFPLVLHLRRSLFTDLSAFSSEAVAALSSAGTV-DSGATQREEQ-------IKASFLTSRKTKTKQGRSGLXXXXXXXXXXXXXXXXXXXXXXXX--------------------XXXXXXXXXXXXXXXXXXNVGDAGVDDLLESGRVSQHGSTAVAAATPGTKEDASTRDADEAGVMAKPMAVKHLRLGEV 1218          
BLAST of mRNA_S-dermatodea_contig8487.16652.1 vs. uniprot
Match: A0A835Z2Z4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2Z4_9STRA)

HSP 1 Score: 76.3 bits (186), Expect = 9.020e-11
Identity = 71/235 (30.21%), Postives = 99/235 (42.13%), Query Frame = 0
Query:  147 RSVSASERLRKAVRALKQKLQQRPNTHLALHLKRLKLELWRDESSCPFLRAEVRRVNADVMVYDDSSGSLDLQVGSLWASQV--RGTGHADGATLWGDDSTDAASEWWRAXXXGESGRQQTLIALEVVKPLMP-------------------------------------QDLER--LSDQGNLRGWTPREITVHVQAQLGSPIGDMTLIRHFEAAAFPLVVHLRRSLFADLSAF 340
            R+ + +++L   +   ++ L QRPN    + ++R+ L L RD S   F  A V  V+  +  YDD+SGSLDL+V SLWA                               XXX      + L+A  V+ PL                                       QDLE   L+ +  +R WTP +  V V+A LG P+  + ++RHFE      VV LRRSLF DLSAF
Sbjct: 1847 RAAAITDQLALVIEQRRKALAQRPNVDAHVRVRRVALRLQRDSSPSSFFVAHVVGVSVKLERYDDASGSLDLEVRSLWADHFDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRALLARRVLAPLTAKRPRQVYALKSLRLQCLNALACAXXXXXXXXXXRRAAQDLEAGPLAMRQTMRPWTPEDPVVLVRASLGPPVNGIPVVRHFE------VVRLRRSLFTDLSAF 2075          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig8487.16652.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7G7J9_ECTSI2.750e-13650.87Apt1 domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6H5KUC4_9PHAE1.200e-6945.95Apt1 domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A835Z2Z4_9STRA9.020e-1130.21Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig8487contigS-dermatodea_contig8487:204..7153 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig8487.16652.1mRNA_S-dermatodea_contig8487.16652.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig8487 204..7153 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig8487.16652.1 ID=prot_S-dermatodea_contig8487.16652.1|Name=mRNA_S-dermatodea_contig8487.16652.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=504bp
MSAQAAINSLQLKLIVTVASEVLVSPLPVLRMLKKSRGSVGNPAVPGKRD
STGENPTAMGLGGVGPAATAAAAAGDGRWMGMGLGSPPPPTVTKAWAAKR
RAGWETLEVGRTCGSCLFEGARRSGVRAFTAWLHVCWLSPPSTSLARSVS
ASERLRKAVRALKQKLQQRPNTHLALHLKRLKLELWRDESSCPFLRAEVR
RVNADVMVYDDSSGSLDLQVGSLWASQVRGTGHADGATLWGDDSTDAASE
WWRAGGGGESGRQQTLIALEVVKPLMPQDLERLSDQGNLRGWTPREITVH
VQAQLGSPIGDMTLIRHFEAAAFPLVVHLRRSLFADLSAFASDALSALLS
GGAAGDSGALQREEQARKNGTHIKASFLTSKKTAAKPGKSGFGRSRLRRS
WRGTKGTAAAPSTPGPGPTTGGRPRSISGPDGGSGGGGTAGEVAGPSNEW
DSASDVGEYAVRFDVSLNRACTCKGCMEDTTPMEDEAGIMEKPMAVKHLR
LGEV
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