prot_S-dermatodea_contig8482.16648.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig8482.16648.1
Unique Nameprot_S-dermatodea_contig8482.16648.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length363
Homology
BLAST of mRNA_S-dermatodea_contig8482.16648.1 vs. uniprot
Match: D8LRH5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRH5_ECTSI)

HSP 1 Score: 127 bits (320), Expect = 6.940e-30
Identity = 115/262 (43.89%), Postives = 146/262 (55.73%), Query Frame = 0
Query:   79 KREDFEKMKELSAHMDNIVQRLSNFFPLD--EDDERVSTPLPQPVPELPPLPHPERLTEVRNASISARVMTMDRAXXXXXXXXXXXXSVASGLHFEDEFSGSADA--SQGEDAEHMEHPILG-RGMKGAMKTHGGVTGIVGRRQDGVEKFAGNRKNP-RGEATAQRTRARTGSLSGDLRNTNA-SPGLGGQRPTEEGRRRYNGPGDASDASCDADAFHEQLIWDELRDSL---AGRDRGSPEKRHVRDTVEKAKRDLDGEEQ 330
            KREDFEKMKELS HMDN+VQRL+ +FPLD  E + +     P   PELPPLP P      R+  +SARV+TM   XXXXXXXXXXX SVASGLHF+DE SGS  +    GED +H E    G RG +G  +          RR    ++ AG+RK+   G   A+  +  T S S   R+ +    GLG +  +  G  R   P   + A+   +  HE+L+WDELR++L   AG D   P   H    VEKA+ D   EEQ
Sbjct:   92 KREDFEKMKELSTHMDNVVQRLATYFPLDGTEGEPKTDVVPPSAAPELPPLPLPSP-DNARDRYVSARVLTMXXXXXXXXXXXXXXTSVASGLHFDDELSGSTASYGRHGEDEQHAERRGAGGRGQRGTSRRQSQSRADSDRRGMDTDEPAGSRKHEAEGPDAAEHRKGTTSSWSRKDRSASVVDKGLGLKLESSGGEMRSRPPPGRAGANLGFEDSHERLLWDELRETLEGVAGSDAVPPAWGHGA-AVEKARADRAHEEQ 351          
BLAST of mRNA_S-dermatodea_contig8482.16648.1 vs. uniprot
Match: A0A6H5KZ75_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZ75_9PHAE)

HSP 1 Score: 119 bits (298), Expect = 9.850e-27
Identity = 120/283 (42.40%), Postives = 158/283 (55.83%), Query Frame = 0
Query:   79 KREDFEKMKELSAHMDNIVQRLSNFFPLDEDDERVSTPL--PQPVPELPPLPHPERLTEVRNASISARVMTMDRAXXXXXXXXXXXXSVASGLHFEDEFSGS--ADASQGEDAEHMEHPILG-RGMKGAMKTHGGVTGIVGRRQDGVEKFAGNRKNP-RGEATAQRTRARTGSLSGDLRNTNAS---PGLGGQRPTEEGRRRYNGPGDASDASCDADAFH----------EQLIWDELRDSL---AGRDRGSPEKRHVRDTVEKAKRDLDGEEQRRRLIEEAI 339
            KREDFEKMKELSAHMDN+VQRL+ +FP D+ +   +T +  P   PELPPLP P      R   +SARV+TMDRAXXXXXXXXXXXXSVASGLHF+DE S S  +++  GED +  +    G RG +G  +          RR    ++  G+RK+   G  TA+  +  T + S   ++T+AS    GLG +  +  G RR   P   + A+   +  H          E+L+WDELR+SL   AG D   P   H     EKA+ +   E     LI+EAI
Sbjct:   92 KREDFEKMKELSAHMDNVVQRLATYFPPDDTEGEPNTDVVPPSAAPELPPLPLPPP-DNARGRYVSARVLTMDRAXXXXXXXXXXXXSVASGLHFDDELSASTASNSRHGEDEQRAKRRGSGGRGQRGTSRRQSRADS--NRRGMDTDEPVGSRKHEAEGPDTAEHRKRTTSNWS--RKDTSASVVGKGLGLKLESSGGGRRSRSPPGRAGANLGFEDSHXXXXXXXXXXERLLWDELRESLEGVAGSDAVPPAWGHGA-AAEKARAERAREXXXXXLIDEAI 368          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig8482.16648.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LRH5_ECTSI6.940e-3043.89Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KZ75_9PHAE9.850e-2742.40Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 311..338

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig8482contigS-dermatodea_contig8482:1127..3524 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig8482.16648.1mRNA_S-dermatodea_contig8482.16648.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig8482 1127..3524 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig8482.16648.1 ID=prot_S-dermatodea_contig8482.16648.1|Name=mRNA_S-dermatodea_contig8482.16648.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=363bp
SSDSSQDNTSEDGTETSGSEESGSDSGDDSSGGSDGSNSTSSGEGEDDSS
SGGSDEESENGEDEESEEDDEEEKKQVSKREDFEKMKELSAHMDNIVQRL
SNFFPLDEDDERVSTPLPQPVPELPPLPHPERLTEVRNASISARVMTMDR
AVSARRLTTDRAVSVASGLHFEDEFSGSADASQGEDAEHMEHPILGRGMK
GAMKTHGGVTGIVGRRQDGVEKFAGNRKNPRGEATAQRTRARTGSLSGDL
RNTNASPGLGGQRPTEEGRRRYNGPGDASDASCDADAFHEQLIWDELRDS
LAGRDRGSPEKRHVRDTVEKAKRDLDGEEQRRRLIEEAIAILLESSSDEE
GVDEEGVDGGGR*
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