prot_S-dermatodea_contig84723.16642.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig84723.16642.1
Unique Nameprot_S-dermatodea_contig84723.16642.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length40
Homology
BLAST of mRNA_S-dermatodea_contig84723.16642.1 vs. uniprot
Match: A0A6H5JEV0_9PHAE (Rho-GAP domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEV0_9PHAE)

HSP 1 Score: 69.7 bits (169), Expect = 7.660e-13
Identity = 32/36 (88.89%), Postives = 35/36 (97.22%), Query Frame = 0
Query:    5 RFLFKFLRKVASHSTTNRMTSENLAIVWAPNLIRPQ 40
            RFLF+FLRKVA HS+TNRMTSENLAIVWAPNL+RPQ
Sbjct: 1202 RFLFEFLRKVAMHSSTNRMTSENLAIVWAPNLLRPQ 1237          
BLAST of mRNA_S-dermatodea_contig84723.16642.1 vs. uniprot
Match: D7FL35_ECTSI (Similar to Rho GTPase activating protein 24 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL35_ECTSI)

HSP 1 Score: 68.2 bits (165), Expect = 2.670e-12
Identity = 31/36 (86.11%), Postives = 35/36 (97.22%), Query Frame = 0
Query:    5 RFLFKFLRKVASHSTTNRMTSENLAIVWAPNLIRPQ 40
            RFLF+FLR+VA HS+TNRMTSENLAIVWAPNL+RPQ
Sbjct: 1256 RFLFEFLREVAMHSSTNRMTSENLAIVWAPNLLRPQ 1291          
BLAST of mRNA_S-dermatodea_contig84723.16642.1 vs. uniprot
Match: A0A835Z007_9STRA (Rho-GAP domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z007_9STRA)

HSP 1 Score: 50.1 bits (118), Expect = 6.490e-6
Identity = 25/35 (71.43%), Postives = 26/35 (74.29%), Query Frame = 0
Query:    5 RFLFKFLRKVASHSTTNRMTSENLAIVWAPNLIRP 39
            R LF FLR VA  S  N MT+ NLAIVWAPNLIRP
Sbjct: 1206 RGLFLFLRSVADKSAVNLMTAGNLAIVWAPNLIRP 1240          
BLAST of mRNA_S-dermatodea_contig84723.16642.1 vs. uniprot
Match: UPI0010FCC194 (rho GTPase-activating protein 15-like isoform X1 n=5 Tax=Acropora TaxID=6127 RepID=UPI0010FCC194)

HSP 1 Score: 49.3 bits (116), Expect = 1.220e-5
Identity = 21/36 (58.33%), Postives = 28/36 (77.78%), Query Frame = 0
Query:    5 RFLFKFLRKVASHSTTNRMTSENLAIVWAPNLIRPQ 40
            + L + LRK+  HS TNRMT++NLAIVW PNL+ P+
Sbjct:  719 KLLLRHLRKLMEHSETNRMTAQNLAIVWGPNLMWPR 754          
BLAST of mRNA_S-dermatodea_contig84723.16642.1 vs. uniprot
Match: A0A7I8W991_9ANNE (DgyrCDS12950 n=3 Tax=Dimorphilus gyrociliatus TaxID=2664684 RepID=A0A7I8W991_9ANNE)

HSP 1 Score: 48.9 bits (115), Expect = 1.670e-5
Identity = 20/36 (55.56%), Postives = 29/36 (80.56%), Query Frame = 0
Query:    5 RFLFKFLRKVASHSTTNRMTSENLAIVWAPNLIRPQ 40
            + L K L  +A+HS TN+MT+ NLA+VWAP+L+RP+
Sbjct:  515 KILVKHLTTIAAHSITNKMTAANLAVVWAPSLLRPR 550          
BLAST of mRNA_S-dermatodea_contig84723.16642.1 vs. uniprot
Match: A0A1X2GUM2_9FUNG (Rho GTPase activation protein n=1 Tax=Hesseltinella vesiculosa TaxID=101127 RepID=A0A1X2GUM2_9FUNG)

HSP 1 Score: 48.9 bits (115), Expect = 1.670e-5
Identity = 21/35 (60.00%), Postives = 28/35 (80.00%), Query Frame = 0
Query:    6 FLFKFLRKVASHSTTNRMTSENLAIVWAPNLIRPQ 40
            +L KFL +V  H+ TNRMT+ NLA+V+APNLIR +
Sbjct:  329 YLLKFLHQVTDHAETNRMTAHNLAVVFAPNLIRAE 363          
BLAST of mRNA_S-dermatodea_contig84723.16642.1 vs. uniprot
Match: A0A8C4R218_EPTBU (Rho-GAP domain-containing protein n=2 Tax=Eptatretus burgeri TaxID=7764 RepID=A0A8C4R218_EPTBU)

HSP 1 Score: 47.8 bits (112), Expect = 4.260e-5
Identity = 21/33 (63.64%), Postives = 27/33 (81.82%), Query Frame = 0
Query:    6 FLFKFLRKVASHSTTNRMTSENLAIVWAPNLIR 38
            FL + L ++ASHS+T  M S+NLAIVWAPNL+R
Sbjct:  150 FLLRHLSRMASHSSTTNMHSKNLAIVWAPNLLR 182          
BLAST of mRNA_S-dermatodea_contig84723.16642.1 vs. uniprot
Match: UPI000CD66844 (rho GTPase-activating protein 9 isoform X1 n=3 Tax=Paramormyrops kingsleyae TaxID=1676925 RepID=UPI000CD66844)

HSP 1 Score: 47.4 bits (111), Expect = 5.840e-5
Identity = 19/35 (54.29%), Postives = 28/35 (80.00%), Query Frame = 0
Query:    6 FLFKFLRKVASHSTTNRMTSENLAIVWAPNLIRPQ 40
            F+F+ LR+V  HS TNRMT++N+ IV+ P L+RP+
Sbjct:  770 FMFQHLRRVMEHSDTNRMTTQNIGIVFGPTLMRPE 804          
BLAST of mRNA_S-dermatodea_contig84723.16642.1 vs. uniprot
Match: A0A226M6K4_CALSU (Rho-GAP domain-containing protein (Fragment) n=1 Tax=Callipepla squamata TaxID=9009 RepID=A0A226M6K4_CALSU)

HSP 1 Score: 44.7 bits (104), Expect = 8.530e-5
Identity = 20/33 (60.61%), Postives = 25/33 (75.76%), Query Frame = 0
Query:    6 FLFKFLRKVASHSTTNRMTSENLAIVWAPNLIR 38
            FL + L ++ASHS T  M + NLAIVWAPNL+R
Sbjct:    4 FLMRHLLRMASHSHTTNMHARNLAIVWAPNLLR 36          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig84723.16642.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 9
Match NameE-valueIdentityDescription
A0A6H5JEV0_9PHAE7.660e-1388.89Rho-GAP domain-containing protein n=2 Tax=Ectocarp... [more]
D7FL35_ECTSI2.670e-1286.11Similar to Rho GTPase activating protein 24 n=1 Ta... [more]
A0A835Z007_9STRA6.490e-671.43Rho-GAP domain-containing protein n=1 Tax=Tribonem... [more]
UPI0010FCC1941.220e-558.33rho GTPase-activating protein 15-like isoform X1 n... [more]
A0A7I8W991_9ANNE1.670e-555.56DgyrCDS12950 n=3 Tax=Dimorphilus gyrociliatus TaxI... [more]
A0A1X2GUM2_9FUNG1.670e-560.00Rho GTPase activation protein n=1 Tax=Hesseltinell... [more]
A0A8C4R218_EPTBU4.260e-563.64Rho-GAP domain-containing protein n=2 Tax=Eptatret... [more]
UPI000CD668445.840e-554.29rho GTPase-activating protein 9 isoform X1 n=3 Tax... [more]
A0A226M6K4_CALSU8.530e-560.61Rho-GAP domain-containing protein (Fragment) n=1 T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000198Rho GTPase-activating protein domainPFAMPF00620RhoGAPcoord: 5..40
e-value: 5.1E-13
score: 49.1
IPR000198Rho GTPase-activating protein domainPROSITEPS50238RHOGAPcoord: 1..40
score: 15.272
IPR008936Rho GTPase activation proteinGENE3D1.10.555.10coord: 2..40
e-value: 1.5E-13
score: 52.3
IPR008936Rho GTPase activation proteinSUPERFAMILY48350GTPase activation domain, GAPcoord: 5..40
NoneNo IPR availablePANTHERPTHR45808FAMILY NOT NAMEDcoord: 5..39

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig84723contigS-dermatodea_contig84723:510..629 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig84723.16642.1mRNA_S-dermatodea_contig84723.16642.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig84723 510..629 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig84723.16642.1 ID=prot_S-dermatodea_contig84723.16642.1|Name=mRNA_S-dermatodea_contig84723.16642.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=40bp
LRARRFLFKFLRKVASHSTTNRMTSENLAIVWAPNLIRPQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000198RhoGAP_dom
IPR008936Rho_GTPase_activation_prot