mRNA_S-dermatodea_contig8470.16638.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-dermatodea_contig8470.16638.1
Unique NamemRNA_S-dermatodea_contig8470.16638.1
TypemRNA
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Homology
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BLAST of mRNA_S-dermatodea_contig8470.16638.1 vs. uniprot
Match: A0A6H5JUP4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUP4_9PHAE)

HSP 1 Score: 98.2 bits (243), Expect = 4.310e-20
Identity = 67/157 (42.68%), Postives = 84/157 (53.50%), Query Frame = 2 
Query:  203 MPKASKTA---ANADLPPNWEAREVGGKTVYINHSTRKTQWEKPKLLKKEKARAPARPLPGEQVQLPHA------------VPVDDSQASGSTRERRETSSQVDHRP--ALPPRASL---------EPLPAGWESKIINGNVVYIDHANQVTSFDRP 595
            MPKA   A   AN DLP NWEAR+V G+ VYINH+TR TQW KPK   K++A A A P+     +                     ++ + +T+ R   +S  +  P   LP  A +          PLPAGWESKII+G VVYIDH NQ TSF+RP
Sbjct:    1 MPKAKPAALAAANKDLPQNWEARDVKGRIVYINHTTRTTQWSKPKFSTKKRA-ATAEPVASAHSKSASGRAXXXXXXXXXXXXXSAARPAAATQTRLGGASVSNSVPWSNLPAPAGVASRALTTVSSPLPAGWESKIIDGRVVYIDHTNQRTSFERP 156
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BLAST of mRNA_S-dermatodea_contig8470.16638.1 vs. uniprot
Match: D7G818_ECTSI (Ubiquitin-protein ligase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G818_ECTSI)

HSP 1 Score: 81.3 bits (199), Expect = 3.030e-14
Identity = 58/150 (38.67%), Postives = 69/150 (46.00%), Query Frame = 2 
Query:  239 LPPNWEAREVGGKTVYINHSTRKTQWEKPKLLKKEKARAPARPLPGEQVQLPH----------------------------AVPVDDSQASGSTRERRETSSQVDHRPALPPRASL---EPLPAGWESKIINGNVVYIDHANQVTSFDRP 595
            L P+WEAR+V G+ VYINH+TR TQW KPK   K K  A A P+                                     A P    +  G+        S +     +  RA      PLPAGWESKII+G VVYIDHANQ TSF+RP
Sbjct:   68 LKPDWEARDVKGRIVYINHTTRTTQWSKPKFSSK-KGVATAEPVASAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATPT---RLRGANFNNSVPGSNLPAPAGVASRAVTTVSSPLPAGWESKIIDGRVVYIDHANQRTSFERP 213
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BLAST of mRNA_S-dermatodea_contig8470.16638.1 vs. uniprot
Match: A0A4P9ZWB0_9FUNG (E3 ubiquitin-protein ligase n=1 Tax=Dimargaris cristalligena TaxID=215637 RepID=A0A4P9ZWB0_9FUNG)

HSP 1 Score: 69.7 bits (169), Expect = 2.570e-10
Identity = 46/144 (31.94%), Postives = 69/144 (47.92%), Query Frame = 2 
Query:  197 TTMPKASKTAANAD----LPPNWEAREVG-GKTVYINHSTRKTQWEKPKLLKKEKARAPARPLPGEQVQLPHAVPVDDSQASGSTRERRETSSQVD-HRPALPPRASLEPLPAGWESKIIN-GNVVYIDHANQVTSFDRPMLPA 607
            TT+  A      AD    LP  WE R    G+  Y++HSTR T W  P+L     A   A    G       + P + +  SG     + +  + D    A P +++L PLP GWE ++ N G+V ++DH  + T++D P LP+
Sbjct:  265 TTLAVAQSLVTTADDLGALPSGWEQRFTAEGRPYYVDHSTRTTSWNDPRLPASSDATGAAGSSSGPST---GSAPTNGTTTSGRHGRAQSSQPRADVGLSATPSQSTLGPLPTGWEMRVTNTGHVFFVDHNTKTTTWDDPRLPS 405
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BLAST of mRNA_S-dermatodea_contig8470.16638.1 vs. uniprot
Match: UPI001C34CAAF (Uncharacterized protein n=1 Tax=Manduca sexta TaxID=7130 RepID=UPI001C34CAAF)

HSP 1 Score: 63.9 bits (154), Expect = 2.320e-8
Identity = 41/144 (28.47%), Postives = 65/144 (45.14%), Query Frame = 2 
Query:  239 LPPNWEARE-VGGKTVYINHSTRKTQWEKPKLLKKEKARAPARPLPGEQVQLPHAVPVDDSQAS-------------GSTRERRETSSQVDHRPALPPRASLEPLPAGWE-SKIINGNVVYIDHANQVTSFDRPMLPAVAASTT 625
            LPP WE R+   G+T Y+NH  R TQWE+P   +     + A  +     +      +DD +A+             GS+   R +S+   H  +LP   + E LP GW   +  NG + +IDH  + T++  P     ++  T
Sbjct:   60 LPPGWEERQDANGRTYYVNHIERTTQWERPTFTRHMSVESQAERIENAATEFQRRFHIDDERAASPSQALHNQEETDGSSESARSSSAGSAHSHSLP---NSEGLPPGWSMQRAPNGRIFFIDHNKKTTTWIDPRTGCASSLPT 200
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BLAST of mRNA_S-dermatodea_contig8470.16638.1 vs. uniprot
Match: UPI0018CC94E7 (transcriptional coactivator yorkie-like isoform X1 n=4 Tax=Teleopsis dalmanni TaxID=139649 RepID=UPI0018CC94E7)

HSP 1 Score: 61.6 bits (148), Expect = 1.280e-7
Identity = 42/125 (33.60%), Postives = 65/125 (52.00%), Query Frame = 2 
Query:  239 LPPNWE-AREVGGKTVYINHSTRKTQWEKPKLLKKEKARAPARPLPGEQVQLPHAVPVDDSQASGSTRERRETSSQVDHRPALPPRASLEPLPAGWESKII-NGNVVYIDHANQVTSFDRPMLPA 607
            LP  WE A+   G+  Y+NH+T+ TQWE P++  K++  A              A+   + +AS     +RET S  D+         L PLP GWE  +  +G+V +I+H N+ TS++ P +PA
Sbjct:  230 LPAGWEQAKTNDGQIYYLNHTTKTTQWEDPRIQLKQQRTAH------------QAINFANLRAS-----QRETVSLTDN---------LGPLPEGWEQALTESGDVYFINHINRTTSWNDPRIPA 328
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BLAST of mRNA_S-dermatodea_contig8470.16638.1 vs. uniprot
Match: A0A1B6ER03_9HEMI (HECT-type E3 ubiquitin transferase (Fragment) n=1 Tax=Cuerna arida TaxID=1464854 RepID=A0A1B6ER03_9HEMI)

HSP 1 Score: 61.6 bits (148), Expect = 1.420e-7
Identity = 45/139 (32.37%), Postives = 63/139 (45.32%), Query Frame = 2 
Query:  239 LPPNWEARE-VGGKTVYINHSTRKTQWEKPKLLKKEKARAPARPLPGEQVQLPHAVPVDD-------------SQAS----GSTRERRETSSQ-VDHRPALPPRASLEPLPAGWESKII-NGNVVYIDHANQVTSFDRP 595
            LPP WE R+   G+T Y+NH  R TQWE+P LL +             + Q    +  DD             SQAS      T+ R E+  Q  +  P +    S E LP GW  ++  NG V +IDH ++ T++  P
Sbjct:   59 LPPGWEERQDANGRTYYVNHVARTTQWERPTLLNESSVNTQNLESAATEFQRRFHISADDNESNRRSSVTSNVSQASEVVDSPTQPRPESQPQPAEEAPTVRTDPSREGLPQGWSLQVAPNGRVFFIDHNSRATTWVDP 197
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BLAST of mRNA_S-dermatodea_contig8470.16638.1 vs. uniprot
Match: UPI0018A143DC (E3 ubiquitin-protein ligase Nedd-4 isoform X21 n=1 Tax=Drosophila subpulchrella TaxID=1486046 RepID=UPI0018A143DC)

HSP 1 Score: 61.2 bits (147), Expect = 2.000e-7
Identity = 45/159 (28.30%), Postives = 72/159 (45.28%), Query Frame = 2 
Query:  191 EITTMPKASKTAANADLPPNWEARE-VGGKTVYINHSTRKTQWEKPKLLKKEKARAPARPLPGEQVQLPHAVPVDDSQASGSTRERRETSSQVDHRP-----------------ALPPR-----ASLEPLPAGWESKII-NGNVVYIDHANQVTSFDRP 595
            E ++ P    T  +  LP  WE R+   G+T Y+NH+ R TQWE+P +L    +++  +   G   Q    + VD++++  S  E  +T     H P                 A+PP         EPLP  W  ++  NG   +IDHA++ T++  P
Sbjct:  191 ETSSQPHPFPTGGHDALPAGWEERQDANGRTYYVNHTARTTQWERPTILTSNSSQSTDQL--GSDFQRRFHISVDETESGRSANE--DTDHTDSHNPSDISAPSTRRNSEEDNAAVPPMEQNAGGEEEPLPPRWSMQVAPNGRTFFIDHASRRTTWIDP 345
[Close]
BLAST of mRNA_S-dermatodea_contig8470.16638.1 vs. uniprot
Match: UPI000034DE7A (Nedd4, isoform E n=1 Tax=Drosophila melanogaster TaxID=7227 RepID=UPI000034DE7A)

HSP 1 Score: 61.2 bits (147), Expect = 2.000e-7
Identity = 45/159 (28.30%), Postives = 72/159 (45.28%), Query Frame = 2 
Query:  191 EITTMPKASKTAANADLPPNWEARE-VGGKTVYINHSTRKTQWEKPKLLKKEKARAPARPLPGEQVQLPHAVPVDDSQASGSTRERRETSSQVDHRP-----------------ALPPR-----ASLEPLPAGWESKII-NGNVVYIDHANQVTSFDRP 595
            E +  P    T  +  LP  WE R+   G+T Y+NH+ R TQW++P +L    +++    L  +  +  H + VDD+++  S  E  +T     H P                 A+PP         EPLP  W  ++  NG   +IDHA++ T++  P
Sbjct:  191 ETSAQPHPFPTGGHDALPAGWEERQDANGRTYYVNHTARTTQWDRPTVLNSHSSQSTDDQLASDFQRRFH-ISVDDTESGRSANE--DTDHTDSHNPSDISAPSTRRNSEEDNAAVPPMEQNTGGEEEPLPPRWSMQVAPNGRTFFIDHASRRTTWIDP 346
[Close]
BLAST of mRNA_S-dermatodea_contig8470.16638.1 vs. uniprot
Match: Q9VVI3-4 (Isoform 4 of E3 ubiquitin-protein ligase Nedd-4 n=1 Tax=Drosophila melanogaster TaxID=7227 RepID=Q9VVI3-4)

HSP 1 Score: 61.2 bits (147), Expect = 2.010e-7
Identity = 45/159 (28.30%), Postives = 72/159 (45.28%), Query Frame = 2 
Query:  191 EITTMPKASKTAANADLPPNWEARE-VGGKTVYINHSTRKTQWEKPKLLKKEKARAPARPLPGEQVQLPHAVPVDDSQASGSTRERRETSSQVDHRP-----------------ALPPR-----ASLEPLPAGWESKII-NGNVVYIDHANQVTSFDRP 595
            E +  P    T  +  LP  WE R+   G+T Y+NH+ R TQW++P +L    +++    L  +  +  H + VDD+++  S  E  +T     H P                 A+PP         EPLP  W  ++  NG   +IDHA++ T++  P
Sbjct:  194 ETSAQPHPFPTGGHDALPAGWEERQDANGRTYYVNHTARTTQWDRPTVLNSHSSQSTDDQLASDFQRRFH-ISVDDTESGRSANE--DTDHTDSHNPSDISAPSTRRNSEEDNAAVPPMEQNTGGEEEPLPPRWSMQVAPNGRTFFIDHASRRTTWIDP 349
[Close]
BLAST of mRNA_S-dermatodea_contig8470.16638.1 vs. uniprot
Match: UPI0007E2EE31 (E3 ubiquitin-protein ligase Nedd-4 isoform X14 n=1 Tax=Drosophila suzukii TaxID=28584 RepID=UPI0007E2EE31)

HSP 1 Score: 61.2 bits (147), Expect = 2.010e-7
Identity = 45/159 (28.30%), Postives = 72/159 (45.28%), Query Frame = 2 
Query:  191 EITTMPKASKTAANADLPPNWEARE-VGGKTVYINHSTRKTQWEKPKLLKKEKARAPARPLPGEQVQLPHAVPVDDSQASGSTRERRETSSQVDHRP-----------------ALPPR-----ASLEPLPAGWESKII-NGNVVYIDHANQVTSFDRP 595
            E ++ P    T  +  LP  WE R+   G+T Y+NH+ R TQWE+P +L    +++  +   G   Q    + VD++++  S  E  +T     H P                 A+PP         EPLP  W  ++  NG   +IDHA++ T++  P
Sbjct:  195 ETSSQPHPFPTGGHDALPAGWEERQDANGRTYYVNHTARTTQWERPTILTSNSSQSTDQL--GSDFQRRFHISVDETESGRSANE--DTDHTDSHNPSDISAPSTRRNSEEDNAAVPPMEQNAGGEEEPLPPRWSMQVAPNGRTFFIDHASRRTTWIDP 349
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig8470.16638.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JUP4_9PHAE4.310e-2042.68Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G818_ECTSI3.030e-1438.67Ubiquitin-protein ligase n=1 Tax=Ectocarpus silicu... [more]
A0A4P9ZWB0_9FUNG2.570e-1031.94E3 ubiquitin-protein ligase n=1 Tax=Dimargaris cri... [more]
UPI001C34CAAF2.320e-828.47Uncharacterized protein n=1 Tax=Manduca sexta TaxI... [more]
UPI0018CC94E71.280e-733.60transcriptional coactivator yorkie-like isoform X1... [more]
A0A1B6ER03_9HEMI1.420e-732.37HECT-type E3 ubiquitin transferase (Fragment) n=1 ... [more]
UPI0018A143DC2.000e-728.30E3 ubiquitin-protein ligase Nedd-4 isoform X21 n=1... [more]
UPI000034DE7A2.000e-728.30Nedd4, isoform E n=1 Tax=Drosophila melanogaster T... [more]
Q9VVI3-42.010e-728.30Isoform 4 of E3 ubiquitin-protein ligase Nedd-4 n=... [more]
UPI0007E2EE312.010e-728.30E3 ubiquitin-protein ligase Nedd-4 isoform X14 n=1... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig8470contigS-dermatodea_contig8470:4049..8888 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons5
Model size635
Cds size561
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig8470.16638.1prot_S-dermatodea_contig8470.16638.1Saccorhiza dermatodea SderLu1190fm monoicouspolypeptideS-dermatodea_contig8470 4049..7904 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622925345.4408877-CDS-S-dermatodea_contig8470:4048..42961622925345.4408877-CDS-S-dermatodea_contig8470:4048..4296Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8470 4049..4296 +
1694079870.7379196-CDS-S-dermatodea_contig8470:4048..42961694079870.7379196-CDS-S-dermatodea_contig8470:4048..4296Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8470 4049..4296 +
1622925345.4532852-CDS-S-dermatodea_contig8470:5035..50911622925345.4532852-CDS-S-dermatodea_contig8470:5035..5091Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8470 5036..5091 +
1694079870.7497823-CDS-S-dermatodea_contig8470:5035..50911694079870.7497823-CDS-S-dermatodea_contig8470:5035..5091Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8470 5036..5091 +
1622925345.4648933-CDS-S-dermatodea_contig8470:6091..63051622925345.4648933-CDS-S-dermatodea_contig8470:6091..6305Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8470 6092..6305 +
1694079870.7601311-CDS-S-dermatodea_contig8470:6091..63051694079870.7601311-CDS-S-dermatodea_contig8470:6091..6305Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8470 6092..6305 +
1622925345.476861-CDS-S-dermatodea_contig8470:7861..79041622925345.476861-CDS-S-dermatodea_contig8470:7861..7904Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8470 7862..7904 +
1694079870.7709522-CDS-S-dermatodea_contig8470:7861..79041694079870.7709522-CDS-S-dermatodea_contig8470:7861..7904Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8470 7862..7904 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622925345.488327-UTR-S-dermatodea_contig8470:7904..79171622925345.488327-UTR-S-dermatodea_contig8470:7904..7917Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig8470 7905..7917 +
1694079870.780973-UTR-S-dermatodea_contig8470:7904..79171694079870.780973-UTR-S-dermatodea_contig8470:7904..7917Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig8470 7905..7917 +
1622925345.5004294-UTR-S-dermatodea_contig8470:8829..88881622925345.5004294-UTR-S-dermatodea_contig8470:8829..8888Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig8470 8830..8888 +
1694079870.7991157-UTR-S-dermatodea_contig8470:8829..88881694079870.7991157-UTR-S-dermatodea_contig8470:8829..8888Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig8470 8830..8888 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-dermatodea_contig8470.16638.1

>prot_S-dermatodea_contig8470.16638.1 ID=prot_S-dermatodea_contig8470.16638.1|Name=mRNA_S-dermatodea_contig8470.16638.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=187bp
KGHDIRTSDSFSISFSSSDFYVSHLIGLLNKERRERAPPAYGPELEGKQP
VSCSHRRLQYGQSRDNNNAEGFEDCGKRGLATKLGSSRGRRQDSLHQPLH
AENPMGEAQTSQERKSKGARAPTPWRASAATSRSTCGRFTGVGVYEGEEG
DKFASRPSTGPPASRFSGAASCRVGEQDHQRKRRLH*
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mRNA from alignment at S-dermatodea_contig8470:4049..8888+

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-dermatodea_contig8470.16638.1 ID=mRNA_S-dermatodea_contig8470.16638.1|Name=mRNA_S-dermatodea_contig8470.16638.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=4840bp|location=Sequence derived from alignment at S-dermatodea_contig8470:4049..8888+ (Saccorhiza dermatodea SderLu1190fm monoicous)
AAAGGACACGACATTCGGACTTCGGACTCCTTTTCCATCAGTTTTTCCTC
TTCTGATTTTTACGTATCGCACTTGATTGGACTGCTCAACAAGGAACGCC
GAGAGAGGGCGCCACCAGCTTACGGCCCAGAGCTGGAAGGGAAGCAGCCG
GTTTCCTGCTCACACAGACGGCTTCAGTACGGTCAATCGCGAGATAACAA
CAATGCCGAAGGCTTCGAAGACTGCGGCAAACGCGGACTTGCCACCAAGT
GAGTCTTCGCACAAGAATGATAGCAATGAATTTCAGGAACACGATGGTGG
TGGTGTCCACTCCAGGGTGTGCAGCCTTCGCATTTCCAAACGGCGGCGAT
GCAATCGGTCGGCACCCTCCCGAGAACGCTCTCGCGATTCGATGGGCCTT
GGTCATCGAGCGAGGGGCATACCGTGTGAAACTGGCGACACCGCGGTGCC
CCGCCGACGTCATCACTCCCAAGGCGTGCATACATAGAGAGGAGCCCAGT
TTTGAAAACAAACTCATAATATGCAGGCCCAGCTGAACTACAGCCGAATC
GGCCCCCCATGCAGTCCGGTCATGCCCGACGCCAAACACGGGGCGCTCGC
CGCTCGGCCAAGTCCTTGCGAGTTTGATTACGGTGGTAGGCTAGCTAGAG
CCTATCCAATCCGACCTCGAGGTTGTCCTCTCGCGCACTTGTATCGTGGG
CTCTGCGTCGCGGAAATCATGCCCACTGATGGAGCCTCCTTTATTTTTGT
TTGGCGGTTTGAGGGTCCGGGCCATCGCGCGCGGGGTGATCGATGCTTCT
GTTATTATGCCTTGGATGTATAGACTCTACTGCTGCAGTACTTATTTAGT
TGTAGTACACTACAGACAGCACAAAACTATTACTTATATTTATATAATAC
TAGAGCTGTATTAGTAGTCTGCCTTTGTTTTTGCCAGCCATTTTGTGTCT
CTCAGCCTCCCATCATGCTTTGTTCGGCGTGGCGCAGACTGGGAAGCTCG
CGAGGTCGGCGGCAAGACAGTTTACATCAACCACTCCACGCGGGTGAGTT
GGGGGAAGAATTGCGTAAGTGCTTGTCCGTTCCTTATTACAATAGCCCCG
TCCAAGCCCGTCGGAGCAATACAGAGTTGTATCATATGATTGTATATTTA
GAGCTCTCATTTCGCTGCTGCTGCTGGTTCTGCTGGTGCTGCTTGCTGCT
GTGCTGCACCAAATTGAACTTCCAATATTCGAGCGCAAGTCGGTCGCCTT
ATTCCATGCTATATGCACAGCCGTTGCCAAAACTGGCGGCGGCCGCTGCC
ACCGCTTCTCCTGATGAGGACCCGCACCGCGCCGCTCGTCTCTGATGCGT
GTGGCGTGCTCTGTGGATCCCACCGCAGTTGGGAGGCTGTTCACCAGGAG
GCCAGGAGGCCGTTGTGTGGGCCGAAACAAACCAATGAATGTATTGCATT
GAAGATTGAAGCAGCGTCTGCCGTGGCTTCCCGCTTTAGACAGACGCGAC
GCCTGGACGCACCAATGGGAAAACGCAAAAGTGCGACTTTTGTCTGGAAG
GCTCATGATATCATACCGCAGTGTGTTGTCAAGGCAGGCGGGGGGGGGGT
GGAGGGTATCCCGCCCCCCCCCGAGAGGCAGCTTGTGGCCCTGCTCTGCC
GCGTAAGCCGGCGTCTTTGTCGTTTGCTTGGACACGCAAGAAACCCTACC
CTTTTGCGACGTACTGTACCGGTAATGAAATACTTCGTATACTTCGAAGT
ATACGACAGACAAGACAGGCCTCCCCCCGAGGGAGCTTCTTCGTTCACTT
TCTCCATGCGCATGATGTGTATGATACATAATGTACACTGAATGTATGGC
ACGTAGTTCAGTAGTTCAAAGGAGCAAGAGAACCCTAGAATAGTGTTTCA
GGTGTTCTTGTGTTGGGTCACGAAGCAAAAGTCACGAACAGCCAAGAGGA
CACACACAAACCTTGGCACTCACCTCCCCCAGCCAGAACTGCCCGAAGAC
CCTTAGATGACACACCCGCGCTCCCCTTCTCCGCGCCCTCCAGAAAACCC
AATGGGAGAAGCCCAAACTTCTCAAGAAAGAAAAAGCAAGGGCGCCCGCG
CGCCCACTCCCTGGCGAGCAAGTGCAGCTACCTCACGCAGTACCTGTGGA
CGATTCACAGGCGTCGGGGTCTACGAGGGAGAGGAGGGAGACAAGTTCGC
AAGTAGACCATCGACCGGCCCTCCCGCCTCGCGCTTCTCTGGAGCCGCTT
CCTGCAGGTACAGGATGTATGTCGTGTGCAACAGCAGTTTTGTATGATAT
GTATGATAAGCGTGCATGTTGATGGTGGAAGGAGTGCTGTGGTGAGCGTG
GAGTCGAAATTATTCTGCCTTCCGCTGGTGATTGTGTGTGTGTGTCGTCG
TGTGTTTGTCGATGGCGGCCGTTCTGACTCGCTCCCCGCCCTCGTTGGTG
TATCATGCCCCCGCGCCTGCCATTTGAAGGTTTTTTTTTTCGGATTTATG
TTTGCAGCAACTGGTTTACGCTATATTGGAGGTGTACAGCAGTAGTACTA
TTTGCTTGATTTGATTTGACGTGTTTCATGCTTACATGCAGGCAATAGCT
TTGAAGAGCTCTGCTTTGAGCTCGACAGAGCTGAGAGGTATTTATATTTT
CTATATACTGTACGACCAGAGTTATCATACATTCAACAATTATATTATGG
ACGCACGAGCCAATCAGTATGAGTACAACAGGCTCTAGAAGTGTATTTTC
GAAGAAACCCACATGGTGCAGAATGCGTTCGGTTGTTGACTTGTATGTAA
CCAGTGGTTGGTCATGTGGTGGACTCTCAGCGTTTTTGTCTTCGGTTTTT
ACAGATCGCGTTCCTCAGAACGGTACACGGTACATACACGTGCGTATCCC
AAGAAAAGGCCGGGAATGTTCCCCGGTGCATGCATCCGCCAACACATGGA
AGAGCAGCAGGCAAGTTTCACACGCCGGTGGCCGGCCTGCGCGCCCCATT
CGGCGTGCTCCCCCTTCCACATCTTCTTCCTCGCTAGGCATCGTCGTGGC
TGGTGCGCTCGTTGCCTAGTTCTTAATCTGTCTTGCCTGGCAACACCGCT
AAGGTAGTGCTCGGCGTGGAGGAACGGAACAAACGTGGTCACGGGACATT
ACCCTCGGCGGTCGTGGCGATGACATGGGTGTTTGTCTCCTCCCGACCAG
GTTTCGGGGGCGTGAAGGACGACATACGTACATTTGCTGGCGGTCGGTTG
GTTCCACTCGACTCGGCTTGGTTTCCCGGGAGGGGGCTGGGTTGGGAGGG
CTGGCTGCATGGCAACATTTGTTGGACGTGCGTGGGGGTTTTGCCTGCGA
TCCGGCACGCGAATTATTCACGGCTCCCTCGTGCTGTAGCAGGCAGAAAC
TCGAAACCCCTGTGTCGGTCCGCGTCGACCCTGACTGTCCCATTGTGCTA
ACGGCGATGTGTTGTGGGCCCCGAAAAAACTCGGGCCAAATGTTCGATTG
TGGCTCCAAAAGCTTTCGAGATTATGCCTCGATTGTCCACGTTAGGCGTG
GTGAAGATTGAAGATTGCAATTGCATCGCCTTCGAAGCGTCTATTTGTGC
ATATCATATGTGCCTGCGTGGGCAATGCCGGTGCGCGCGCCTCATGGATG
CCGAAGCGCGTATGCATTAAAATTTGCGCGAATTGTCCCCCCCACTGTAT
TACCAAGTGACTTTTTGTGTGTTTGATGGAACAGTTTTTTTACCAACAAA
CCTTTGTCTCCCCCCCCTGGCCGTTGTTGGTGCTGGCGTGCTGGCGTGCT
GGCGTGCTGACAGGGTGGGAGAGCAAGATCATCAACGGAAACGTCGTCTA
CATTGACCACGCCAACCAGGTGCGTGAGTGCGGGGCGGTGTGTATGCAAA
AGCTCGGCGTTGCTTTCGCGCGGCACGTCTGTTTCGGCGAAGGGAAGAAG
AGAGCAATACGCAAAATGCAGTGTGACGATCAACGGTTTGCCTACTTTAC
TGCTCTATTGTTTGTACTGCTGTCCGTATGGGATAACCTATGATACGCAT
GTGTGTATGTATGTACGTGACCCTATGCCCCGATTTCTCAATCACTTTTG
ATGAAACCTTCGTATTTTCGTGGCACGACCGTTCGTTCTTGTTTTGTGAT
GTTTTTTTTTGTATGTGCAACAACTACTGTGTTGGATGCGGCATGCTATC
CCGCCTCCCTCCCCCCGCCTGCCTAGACGTCCCCGCGAAGCAATTTACCT
TCGTCCAGGAAAGAGACCAAGGGAAGGTCGGAATGCTCGTTACAGTAGTA
TCGAGGCTACGTATGCAAACTATTAGTTCAACCGCTAGTTAGACGTATCA
TGCTACAGACGTAGTACTCCACACCATGCCCCCTTGCTTCTGGCCGAGCG
GGTTGGTTGTTCCAAGCACTCTGTGGAATGCCCTTGACAAGTCGGCGACA
TGTCTTTGTCCATTTCCGCGCCATCGTGCACGCTTTCCGCGGGATTAGTG
CTCTTTTGCTCCCCCCCCGCCTCTGCCTGGTCGTGAAATGCGGGCGATGG
CGGGCGTGCTCGGTCGAGACTCAAATTTGCGGAGAGTTTCCACGCGGCCC
AGGCGCGGTTTGAGACATGAGCTTCAAGTTCGGGGCACATGCAGAGTTGC
TAGAGAGAGGTCGCTGCGTTTCAGAGCAGGACCAGGCTTTGGCTGACTCT
CGGAGCTCTGCTTGCCCATTTCCTGCGCTTGCGCGTGCGTGCCTTTGCCC
GTCAATCGTCAATCCCATATGGTATGTTCAGGTGACGTCGTTCGATAGGC
CGATGCTTCCGGCGGTGGCTGCGTCTACGACGGGTGGAGG
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Coding sequence (CDS) from alignment at S-dermatodea_contig8470:4049..8888+

>mRNA_S-dermatodea_contig8470.16638.1 ID=mRNA_S-dermatodea_contig8470.16638.1|Name=mRNA_S-dermatodea_contig8470.16638.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=1122bp|location=Sequence derived from alignment at S-dermatodea_contig8470:4049..8888+ (Saccorhiza dermatodea SderLu1190fm monoicous)
AAAGGACACGACATTCGGACTTCGGACTCCTTTTCCATCAGTTTTTCCTC
TTCTGATTTTTACGTATCGCACTTGATTGGACTGCTCAACAAGGAACGCC
GAGAGAGGGCGCCACCAGCTTACGGCCCAGAGCTGGAAGGGAAGCAGCCG
GTTTCCTGCTCACACAGACGGCTTCAGTACGGTCAATCGCGAGATAACAA
CAATGCCGAAGGCTTCGAAGACTGCGGCAAACGCGGACTTGCCACCAAAA
AGGACACGACATTCGGACTTCGGACTCCTTTTCCATCAGTTTTTCCTCTT
CTGATTTTTACGTATCGCACTTGATTGGACTGCTCAACAAGGAACGCCGA
GAGAGGGCGCCACCAGCTTACGGCCCAGAGCTGGAAGGGAAGCAGCCGGT
TTCCTGCTCACACAGACGGCTTCAGTACGGTCAATCGCGAGATAACAACA
ATGCCGAAGGCTTCGAAGACTGCGGCAAACGCGGACTTGCCACCAAACTG
GGAAGCTCGCGAGGTCGGCGGCAAGACAGTTTACATCAACCACTCCACGC
GGACTGGGAAGCTCGCGAGGTCGGCGGCAAGACAGTTTACATCAACCACT
CCACGCGGAAAACCCAATGGGAGAAGCCCAAACTTCTCAAGAAAGAAAAA
GCAAGGGCGCCCGCGCGCCCACTCCCTGGCGAGCAAGTGCAGCTACCTCA
CGCAGTACCTGTGGACGATTCACAGGCGTCGGGGTCTACGAGGGAGAGGA
GGGAGACAAGTTCGCAAGTAGACCATCGACCGGCCCTCCCGCCTCGCGCT
TCTCTGGAGCCGCTTCCTGCAGAAAACCCAATGGGAGAAGCCCAAACTTC
TCAAGAAAGAAAAAGCAAGGGCGCCCGCGCGCCCACTCCCTGGCGAGCAA
GTGCAGCTACCTCACGCAGTACCTGTGGACGATTCACAGGCGTCGGGGTC
TACGAGGGAGAGGAGGGAGACAAGTTCGCAAGTAGACCATCGACCGGCCC
TCCCGCCTCGCGCTTCTCTGGAGCCGCTTCCTGCAGGGTGGGAGAGCAAG
ATCATCAACGGAAACGTCGTCTACATTGAGGTGGGAGAGCAAGATCATCA
ACGGAAACGTCGTCTACATTGA
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