prot_S-dermatodea_contig84651.16635.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig84651.16635.1
Unique Nameprot_S-dermatodea_contig84651.16635.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length43
Homology
BLAST of mRNA_S-dermatodea_contig84651.16635.1 vs. uniprot
Match: A0A7S6U9U2_9STRA (Photosystem I reaction center subunit IX n=1 Tax=Schizocladia ischiensis TaxID=196139 RepID=A0A7S6U9U2_9STRA)

HSP 1 Score: 89.0 bits (219), Expect = 1.130e-22
Identity = 42/42 (100.00%), Postives = 42/42 (100.00%), Query Frame = 0
Query:    1 MDNLLKYLSTAPVLLTIWMTFTAGFIIEVNRFYPDSLTFPVF 42
            MDNLLKYLSTAPVLLTIWMTFTAGFIIEVNRFYPDSLTFPVF
Sbjct:    1 MDNLLKYLSTAPVLLTIWMTFTAGFIIEVNRFYPDSLTFPVF 42          
BLAST of mRNA_S-dermatodea_contig84651.16635.1 vs. uniprot
Match: A0A6B9TNI1_SARFS (Photosystem I reaction center subunit IX n=2 Tax=Fucales TaxID=3009 RepID=A0A6B9TNI1_SARFS)

HSP 1 Score: 79.7 bits (195), Expect = 5.230e-19
Identity = 36/42 (85.71%), Postives = 38/42 (90.48%), Query Frame = 0
Query:    1 MDNLLKYLSTAPVLLTIWMTFTAGFIIEVNRFYPDSLTFPVF 42
            M N LKYLSTAPVLL +WMTFTAGFIIE NRFYPD+LTFPVF
Sbjct:    1 MKNFLKYLSTAPVLLAVWMTFTAGFIIEANRFYPDALTFPVF 42          
BLAST of mRNA_S-dermatodea_contig84651.16635.1 vs. uniprot
Match: D1J7A9_ECTSI (Photosystem I reaction center subunit IX n=51 Tax=Phaeophyceae TaxID=2870 RepID=D1J7A9_ECTSI)

HSP 1 Score: 77.8 bits (190), Expect = 3.040e-18
Identity = 35/42 (83.33%), Postives = 37/42 (88.10%), Query Frame = 0
Query:    1 MDNLLKYLSTAPVLLTIWMTFTAGFIIEVNRFYPDSLTFPVF 42
            M+N LKYLSTAPVL   WMTFTAGFIIE NRFYPD+LTFPVF
Sbjct:    1 MENFLKYLSTAPVLFVAWMTFTAGFIIEANRFYPDALTFPVF 42          
BLAST of mRNA_S-dermatodea_contig84651.16635.1 vs. uniprot
Match: B7T1S9_VAULI (Photosystem I reaction center subunit IX n=1 Tax=Vaucheria litorea TaxID=109269 RepID=B7T1S9_VAULI)

HSP 1 Score: 77.0 bits (188), Expect = 6.130e-18
Identity = 34/42 (80.95%), Postives = 37/42 (88.10%), Query Frame = 0
Query:    1 MDNLLKYLSTAPVLLTIWMTFTAGFIIEVNRFYPDSLTFPVF 42
            M+N  KYLSTAP+LLT WMTFTAGFIIE NRFYPD+LTFP F
Sbjct:    1 MENFFKYLSTAPILLTAWMTFTAGFIIEANRFYPDALTFPSF 42          
BLAST of mRNA_S-dermatodea_contig84651.16635.1 vs. uniprot
Match: K9ZWK2_9STRA (Photosystem I reaction center subunit IX n=14 Tax=Eustigmatophyceae TaxID=5747 RepID=K9ZWK2_9STRA)

HSP 1 Score: 74.3 bits (181), Expect = 7.650e-17
Identity = 32/40 (80.00%), Postives = 37/40 (92.50%), Query Frame = 0
Query:    1 MDNLLKYLSTAPVLLTIWMTFTAGFIIEVNRFYPDSLTFP 40
            M + LKYLSTAPVLLT W+TFTAGF+IE+NRFYPD+LTFP
Sbjct:    5 MKDFLKYLSTAPVLLTAWLTFTAGFVIEINRFYPDALTFP 44          
BLAST of mRNA_S-dermatodea_contig84651.16635.1 vs. uniprot
Match: F3Y7I1_FISSO (Photosystem I reaction center subunit IX n=5 Tax=Bacillariophycidae TaxID=33850 RepID=F3Y7I1_FISSO)

HSP 1 Score: 70.9 bits (172), Expect = 1.670e-15
Identity = 32/39 (82.05%), Postives = 36/39 (92.31%), Query Frame = 0
Query:    1 MDNLLKYLSTAPVLLTIWMTFTAGFIIEVNRFYPDSLTF 39
            M++  KYLSTAPVLLTIWMTFTAGFIIE+NRF+PDSL F
Sbjct:    1 MESFKKYLSTAPVLLTIWMTFTAGFIIEINRFFPDSLGF 39          
BLAST of mRNA_S-dermatodea_contig84651.16635.1 vs. uniprot
Match: A0A089VPX9_CERBC (Photosystem I reaction center subunit IX n=4 Tax=Bacillariophyta TaxID=2836 RepID=A0A089VPX9_CERBC)

HSP 1 Score: 70.9 bits (172), Expect = 1.670e-15
Identity = 31/37 (83.78%), Postives = 35/37 (94.59%), Query Frame = 0
Query:    1 MDNLLKYLSTAPVLLTIWMTFTAGFIIEVNRFYPDSL 37
            M+N LKYLSTAPVLLT+WMTFTAGFIIE+NRF+PD L
Sbjct:    1 MNNFLKYLSTAPVLLTLWMTFTAGFIIEINRFFPDML 37          
BLAST of mRNA_S-dermatodea_contig84651.16635.1 vs. uniprot
Match: A0A7T8JKC2_9CRYP (Photosystem I reaction center subunit IX n=1 Tax=Cryptophyta sp. CCMP2293 TaxID=697907 RepID=A0A7T8JKC2_9CRYP)

HSP 1 Score: 69.3 bits (168), Expect = 6.950e-15
Identity = 29/40 (72.50%), Postives = 36/40 (90.00%), Query Frame = 0
Query:    2 DNLLKYLSTAPVLLTIWMTFTAGFIIEVNRFYPDSLTFPV 41
            +NLLKYLSTAPVL+T+WM+FTA F+IE NRF+PD L FP+
Sbjct:    3 NNLLKYLSTAPVLITVWMSFTAAFVIEANRFFPDMLYFPM 42          
BLAST of mRNA_S-dermatodea_contig84651.16635.1 vs. uniprot
Match: PSAJ_PHATC (Photosystem I reaction center subunit IX n=8 Tax=Bacillariophyta TaxID=2836 RepID=PSAJ_PHATC)

HSP 1 Score: 68.2 bits (165), Expect = 1.960e-14
Identity = 30/37 (81.08%), Postives = 34/37 (91.89%), Query Frame = 0
Query:    1 MDNLLKYLSTAPVLLTIWMTFTAGFIIEVNRFYPDSL 37
            M+N  KYLSTAPVLLTIW+TFTAGFIIE+NRF+PD L
Sbjct:    1 MENFQKYLSTAPVLLTIWLTFTAGFIIEINRFFPDLL 37          
BLAST of mRNA_S-dermatodea_contig84651.16635.1 vs. uniprot
Match: PSAJ_GUITH (Photosystem I reaction center subunit IX n=3 Tax=Guillardia theta TaxID=55529 RepID=PSAJ_GUITH)

HSP 1 Score: 67.8 bits (164), Expect = 2.840e-14
Identity = 29/40 (72.50%), Postives = 34/40 (85.00%), Query Frame = 0
Query:    2 DNLLKYLSTAPVLLTIWMTFTAGFIIEVNRFYPDSLTFPV 41
            +N LKYLSTAPVLLTIW++FTA  +IE NRFYPD L FP+
Sbjct:    3 NNFLKYLSTAPVLLTIWLSFTAALVIEANRFYPDMLYFPI 42          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig84651.16635.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S6U9U2_9STRA1.130e-22100.00Photosystem I reaction center subunit IX n=1 Tax=S... [more]
A0A6B9TNI1_SARFS5.230e-1985.71Photosystem I reaction center subunit IX n=2 Tax=F... [more]
D1J7A9_ECTSI3.040e-1883.33Photosystem I reaction center subunit IX n=51 Tax=... [more]
B7T1S9_VAULI6.130e-1880.95Photosystem I reaction center subunit IX n=1 Tax=V... [more]
K9ZWK2_9STRA7.650e-1780.00Photosystem I reaction center subunit IX n=14 Tax=... [more]
F3Y7I1_FISSO1.670e-1582.05Photosystem I reaction center subunit IX n=5 Tax=B... [more]
A0A089VPX9_CERBC1.670e-1583.78Photosystem I reaction center subunit IX n=4 Tax=B... [more]
A0A7T8JKC2_9CRYP6.950e-1572.50Photosystem I reaction center subunit IX n=1 Tax=C... [more]
PSAJ_PHATC1.960e-1481.08Photosystem I reaction center subunit IX n=8 Tax=B... [more]
PSAJ_GUITH2.840e-1472.50Photosystem I reaction center subunit IX n=3 Tax=G... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.20.5.510coord: 1..40
e-value: 1.6E-23
score: 84.1
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..6
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 28..42
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 7..27
NoneNo IPR availablePRODOMPD004198coord: 3..37
e-value: 9.0E-10
score: 146.0
NoneNo IPR availableTMHMMTMhelixcoord: 7..29
IPR002615Photosystem I PsaJ, reaction centre subunit IXPFAMPF01701PSI_PsaJcoord: 1..37
e-value: 1.2E-20
score: 73.8
IPR002615Photosystem I PsaJ, reaction centre subunit IXPANTHERPTHR36082FAMILY NOT NAMEDcoord: 1..42
IPR002615Photosystem I PsaJ, reaction centre subunit IXHAMAPMF_00522PSI_PsaJcoord: 1..41
score: 18.072
IPR036062Photosystem I PsaJ, reaction centre subunit IX superfamilySUPERFAMILY81544Subunit IX of photosystem I reaction centre, PsaJcoord: 1..40

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig84651contigS-dermatodea_contig84651:518..646 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig84651.16635.1mRNA_S-dermatodea_contig84651.16635.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig84651 518..646 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig84651.16635.1 ID=prot_S-dermatodea_contig84651.16635.1|Name=mRNA_S-dermatodea_contig84651.16635.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=43bp
MDNLLKYLSTAPVLLTIWMTFTAGFIIEVNRFYPDSLTFPVF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002615PSI_PsaJ
IPR036062PSI_PsaJ_sf