mRNA_S-dermatodea_contig8463.16634.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig8463.16634.1 vs. uniprot
Match: D8LE76_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LE76_ECTSI) HSP 1 Score: 448 bits (1153), Expect = 4.450e-138 Identity = 419/601 (69.72%), Postives = 468/601 (77.87%), Query Frame = 1
Query: 1 AAVHGQRVVRGFLGRMSALREANLVYEKIFDPRTKAYYYYNTRTYETTWQPPAVVTRILGEFGDLDAVAPTYTDEEAAVMLQAAWRRRQGVRTLRALLATVITKVFDESTGAHYYFNSLTGETSWNKPALFGSEDVDDYLPGTLLGGEAQESVDSFGTGNFGYEQSKNEWGGQEAWTEQQQQLTE---------NQGGTEAGE--GYEGWVWDDSVGWYFDEELSIKQLAGKPIAAENPGESVSNDVGVKNTSGNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLAPRNYPRSKAQRLVDEAEDSVDGAQSLRLDLSMLNLDRVTSRVYGLDWLETLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLKVMPLQVGDLQLLKRTREWEVGLRXXXXXXXXXXXXXXXXXXXXXXXGCRKLRNLRLGHNKIQEARHTRVPESLGDNTALTNLDLCGNSIKTVXXXXXXXXXXXXXXXXXXXXETLSVLPVGKKQRGARLVYLETLRIERNCLTEGPATVETLTTLTELDVSCNPIVGWAPDVSRLRKMKH 1770
+AVH QRVVRGFLGR++A+R+ANLVYEKIFDPRT AYYYYNT ++ETTWQPPAVVTRILGEFGDLDA+APTYT+EEAAVMLQAAWRRR+G+R RALLA+V++KVFDESTGAHYYFN L+GETSW+KPALFG+EDV+DY P +L E Q S + FGTG++ Y+QS+ W GQEAWT++QQ+ + G T E GYEGWVWDD+ GWY+DE+L+ + L G G N XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLAPRN+PRSKAQRLVDEAEDS+DGA+ LDLS L++DRVTSRVY LDWL+ L XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX LK +PLQVGDLQLLKRTREWE+GLR XXXXXXXXXXXXXXXXX CR LR+LRL XXXXXXXXXXXXXXXXXXXX+T S+LPVG+KQ+G RLV LE LR++ N LTE P VET TLTELDVS NPI W+ DVS LRKMKH
Sbjct: 10 SAVHAQRVVRGFLGRLAAIRQANLVYEKIFDPRTHAYYYYNTYSFETTWQPPAVVTRILGEFGDLDAIAPTYTEEEAAVMLQAAWRRRRGIRMTRALLASVVSKVFDESTGAHYYFNGLSGETSWSKPALFGAEDVEDY-PSAMLLAEGQNSAEPFGTGSYDYDQSQG-WVGQEAWTKEQQEXXXXXXXXHAGGSNGDTNTAEEAGYEGWVWDDTSGWYYDEDLATQLLTGGVDVVSKKGSDGGNVSAXXXXX--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLAPRNFPRSKAQRLVDEAEDSIDGARPEILDLSKLDMDRVTSRVYRLDWLQRLDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLKEVPLQVGDLQLLKRTREWEIGLRLLREXXXXXXXXXXXXXXXXXVEECRNLRDLRLDXXXXXX-----XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKTHSILPVGRKQKGPRLVSLEVLRLDGNRLTERPDMVETFKTLTELDVSNNPIKNWSLDVSNLRKMKH 601
BLAST of mRNA_S-dermatodea_contig8463.16634.1 vs. uniprot
Match: A0A6H5KU30_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KU30_9PHAE) HSP 1 Score: 221 bits (563), Expect = 7.310e-61 Identity = 207/502 (41.24%), Postives = 247/502 (49.20%), Query Frame = 1
Query: 1 AAVHGQRVVRGFLGRMS---------------------------------------------------ALREANLVYEKIFDPRTKAYYYYNTRTYETTWQPPAVVTRILGEFGDLDAVAPTYTDEEAAVMLQAAWRRRQGVRTLRALLATVITKVFDESTGAHYYFNSLTGETSWNKPALFGSEDVDDYLPGTLLGGEAQESVDSFGTGNFGYEQSKNEWGGQEAWTEQQQQ-----------LTENQGGTEAGEGYEGWVWDDSVGWYFDEELSIKQLAGKPIAAENPGESVSNDVGVKNTSGNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLAPRNYPRSKAQRLVDEAEDSVDGAQSLRLDLSMLNLDRVTSRVYGLDWLETLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---------LKVMPLQVGDLQLLKRTREWEVG 1293
+AVH QRVVRGFLGR++ A+R+ANLVYEKIFDPRT AYYYYNT ++ETTW AAWRRR+G+R RALLA+V++ +KPALFG+EDV+DY P +L E Q + + FGTG + Y+QS+ W GQEAWT++Q++ +++ T GYEGWVWDD+ GWY+DE+L+ + L G G D G S XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX S+APRN+PRSKAQRLVDEAEDSVDGA+ LDLS L++DRVTSRVY LDWL+ L XXXXX LK +PLQVGDLQLLKRTREWEVG
Sbjct: 10 SAVHAQRVVRGFLGRLAGKGVSPCVTLTVMLVSSPCKVGLGDADFFLALRCATTCVYPSAVFPDESWAAIRQANLVYEKIFDPRTHAYYYYNTCSFETTWH--------------------------------AAWRRRRGLRMTRALLASVVSXXXXXXXXXXXXXXXXXXXXXXSKPALFGAEDVEDY-PSAMLLAEGQNTAEPFGTGIYDYDQSQG-WVGQEAWTKEQKEXXXXXXXQHAGVSDGDANTAEEAGYEGWVWDDTSGWYYDEDLATQLLTGGVDVVSKKGS----DDGNVTASVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSIAPRNFPRSKAQRLVDEAEDSVDGARPEILDLSKLDMDRVTSRVYRLDWLQRLDLSNNRLYRISSDLAGMENLVDVNFRHNRWVREVSQARIQAIPDELEALTKLKHLQLGHNRISGFRGNLYXXXXXXXXXXXXXXLKEVPLQVGDLQLLKRTREWEVG 473
BLAST of mRNA_S-dermatodea_contig8463.16634.1 vs. uniprot
Match: A0A8J2SLX2_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SLX2_9STRA) HSP 1 Score: 127 bits (318), Expect = 1.450e-26 Identity = 66/138 (47.83%), Postives = 93/138 (67.39%), Query Frame = 1
Query: 16 QRVVRGFLGRMSALREANLVYEKIFDPRTKAYYYYNTRTYETTWQPPAVVTRILGEFGDLDAVAPTYTDEEAAVMLQAAWRRRQGVRTLRALLATVITKVFDESTGAHYYFNSLTGETSWNKPALFGSEDVDDYLPGT 429
Q + R L R E V+EKIFDP + YYYYNT T E +W+ PA + + DL VAPT+TDE+AA+ +Q AWRR + +RT+R L+A+V++KV+DE + +YY+N+ TG+TSW KP L GS+D++ PGT
Sbjct: 18 QSLWRRSLVRERTYLELKAVWEKIFDPVQQIYYYYNTVTDEASWKRPAPLL-----WRDLGDVAPTFTDEQAAIYMQCAWRRLKFLRTVRRLVASVVSKVYDEHSQNYYYYNAQTGQTSWTKPLLLGSQDIE---PGT 147
BLAST of mRNA_S-dermatodea_contig8463.16634.1 vs. uniprot
Match: A0A7S3ZML4_9STRA (Hypothetical protein (Fragment) n=3 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZML4_9STRA) HSP 1 Score: 127 bits (318), Expect = 2.290e-26 Identity = 66/138 (47.83%), Postives = 93/138 (67.39%), Query Frame = 1
Query: 16 QRVVRGFLGRMSALREANLVYEKIFDPRTKAYYYYNTRTYETTWQPPAVVTRILGEFGDLDAVAPTYTDEEAAVMLQAAWRRRQGVRTLRALLATVITKVFDESTGAHYYFNSLTGETSWNKPALFGSEDVDDYLPGT 429
Q + R L R E V+EKIFDP + YYYYNT T E +W+ PA + + DL VAPT+TDE+AA+ +Q AWRR + +RT+R L+A+V++KV+DE + +YY+N+ TG+TSW KP L GS+D++ PGT
Sbjct: 36 QSLWRRSLVRERTYLELKAVWEKIFDPVQQIYYYYNTVTDEASWKRPAPLL-----WRDLGDVAPTFTDEQAAIYMQCAWRRLKFLRTVRRLVASVVSKVYDEHSQNYYYYNAQTGQTSWTKPLLLGSQDIE---PGT 165
BLAST of mRNA_S-dermatodea_contig8463.16634.1 vs. uniprot
Match: A0A6H5KSY7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSY7_9PHAE) HSP 1 Score: 114 bits (286), Expect = 1.340e-22 Identity = 76/112 (67.86%), Postives = 87/112 (77.68%), Query Frame = 1
Query: 1435 VPESLGDNTALTNLDLCGNSIKTVXXXXXXXXXXXXXXXXXXXXETLSVLPVGKKQRGARLVYLETLRIERNCLTEGPATVETLTTLTELDVSCNPIVGWAPDVSRLRKMKH 1770
VP +GDNTALTNL+L GNS+K + XXXXXXXXXXXXX+T S+LPVG+KQ+G RLV LE LR++ N LTEGP VETL TLTELDVS NPI W+ DVS LRKMKH
Sbjct: 6 VPAIVGDNTALTNLNLSGNSLKDLPDTINSLXXXXXXXXXXXXXKTHSILPVGRKQKGPRLVSLEVLRLDGNRLTEGPDMVETLKTLTELDVSNNPIKNWSLDVSNLRKMKH 117
BLAST of mRNA_S-dermatodea_contig8463.16634.1 vs. uniprot
Match: W2RD63_PHYPN (Uncharacterized protein n=9 Tax=Phytophthora TaxID=4783 RepID=W2RD63_PHYPN) HSP 1 Score: 96.3 bits (238), Expect = 5.770e-17 Identity = 56/153 (36.60%), Postives = 78/153 (50.98%), Query Frame = 1
Query: 1 AAVHGQRVVRGFLGRMSALREANLVYEKIFDPRTKAYYYYNTRTYETTWQPPAVVTRILGEFGDLDAVAPT----------YTDEEAAVMLQAAWRRRQGVRTLRALLATVITKVFDESTGAHYYFNSLTGETSWNKPALFGSEDVDDYLPGT 429
AA QR R +G + L+ VYE+I+DP YYYYNTRT ETTW P +L + D P T ++AA M+Q A+RR++G + L + V +++D G +YY N+ T ET+W KP L D D + P T
Sbjct: 404 AACMVQRAYRRKIGFRNLLKMCRAVYERIYDPEQGLYYYYNTRTKETTWDKP-----LLLRGAESDVFTPRTRQKKEREEMLTPDKAARMVQRAFRRKKGFQNLLQMCRAVYERIYDPDQGMYYYHNTRTKETTWEKPLLLRGADSDVFTPRT 551
BLAST of mRNA_S-dermatodea_contig8463.16634.1 vs. uniprot
Match: A0A835Z3H8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3H8_9STRA) HSP 1 Score: 92.0 bits (227), Expect = 2.390e-15 Identity = 58/149 (38.93%), Postives = 75/149 (50.34%), Query Frame = 1
Query: 1 AAVHGQRVVRGFLGRMSALREANLVYEKIFDPRTKAYYYYNTRTYETTWQPPAVVTRILGEFGDLDAVAPTYTDEEAAVMLQAAWRRRQGVRTLRALLATVITKVFDESTGAHYYFNSLTGETSWNKPALFGSEDVDDYLPGTLLGGEA 447
AA+ Q++VRG+LGR ALR N VYEKIFDP T +YYYNT T ++W EAAV++QAAWRRR R R+L+A ++ V DE+ KPAL GSE+++ Y L G A
Sbjct: 17 AALGVQKLVRGWLGRKQALRRLNEVYEKIFDPHTHGHYYYNTVTDASSW--------------------------EAAVLVQAAWRRRLAKRLARSLVAASVSMVLDEAXXXXXXXXXXXXXXXXXKPALLGSEELEPYQRLLLTAGGA 139
BLAST of mRNA_S-dermatodea_contig8463.16634.1 vs. uniprot
Match: K3WW52_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WW52_GLOUD) HSP 1 Score: 90.9 bits (224), Expect = 4.270e-15 Identity = 51/136 (37.50%), Postives = 74/136 (54.41%), Query Frame = 1
Query: 16 QRVVRGFLGRMSALREANLVYEKIFDPRTKAYYYYNTRTYETTWQPPAVVTRILGEFGDLDAVAP--TYTDEEAAVMLQAAWRRRQGVRTLRALLATVITKVFDESTGAHYYFNSLTGETSWNKPALF--GSEDVD 411
QR R F+ RM R +YEK +DP K YYY NTRT E+TW+ P V+++ L D+ + +AA +Q R R +R+L+ K+F+ T YY N++TG+ S+ KPALF +ED+D
Sbjct: 56 QRQARAFVSRMLLARLVATIYEKQYDPIAKRYYYVNTRTNESTWEKPKVLSKFLAPDKDVATKKKGGELSQSDAAKCMQCCARAFLARRAIRSLVREAYMKLFNAGTKCFYYLNTITGDVSYQKPALFRRDNEDID 191
BLAST of mRNA_S-dermatodea_contig8463.16634.1 vs. uniprot
Match: A0A2R5GUZ1_9STRA (Peptidylprolyl isomerase n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GUZ1_9STRA) HSP 1 Score: 85.9 bits (211), Expect = 8.010e-14 Identity = 52/147 (35.37%), Postives = 76/147 (51.70%), Query Frame = 1
Query: 28 RGFLGRMSALREANLVYEKIFDPRTKAYYYYNTRTYETTWQPPAVVT--------RILGEFGDLDAV--------APTYTDEEAAVMLQAAWRRRQGVRTLRALLATVITKVFDESTGAHYYFNSLTGETSWNKPALFGSEDVDDYL 420
R R+ A V+E+++D + A+YY NT T+W+PP ++ R F +A A T+ EAA +Q +R R L+ L+ATV K FDE G +Y+N+ TGE+SW+KPA G+ED+DD L
Sbjct: 23 RALRARVQVRTLAKTVFERVYDEGSAAWYYRNTTNGSTSWEPPLLLPGADNVLTPRARRRFAAQEAKRKRGALKRASDMTESEAARFIQNLFRTRAARNRLKMLIATVYQKAFDED-GNVFYYNTRTGESSWDKPAFLGAEDLDDIL 168
BLAST of mRNA_S-dermatodea_contig8463.16634.1 vs. uniprot
Match: A0A7S2RZZ6_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2RZZ6_9STRA) HSP 1 Score: 85.9 bits (211), Expect = 1.030e-13 Identity = 52/149 (34.90%), Postives = 81/149 (54.36%), Query Frame = 1
Query: 1 AAVHGQRVVRGFLGRMSALREANLVYEKIFDPRTKAYYYYNTRTYETTWQPPAVVTRI----LGEF------GDLD---------AVAPTYTDEEAAVMLQAAWRRRQGVRTLRALLATVITKVFDESTGAHYYFNSLTGETSWNKPAL 390
AA+ Q + R R ++ A VY K+ DP + YY++N +T E++W+ P ++ I L F D D A + +T EEAA ++Q WRRR+ + L + ++V TKVFD + +Y+FN+ TGE+SW+KP L
Sbjct: 411 AAIAVQGMWRRRNARKHLMKVATNVYTKVKDPSSDEYYFFNKKTGESSWEKPVLLRDISKSQLCSFKNEESSSDADKKAGGERVRAKSHEWTTEEAASVIQGLWRRREARKNLLKVASSVYTKVFDPGSNDYYFFNTKTGESSWDKPVL 559 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig8463.16634.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig8463.16634.1 >prot_S-dermatodea_contig8463.16634.1 ID=prot_S-dermatodea_contig8463.16634.1|Name=mRNA_S-dermatodea_contig8463.16634.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=704bp AAVHGQRVVRGFLGRMSALREANLVYEKIFDPRTKAYYYYNTRTYETTWQback to top mRNA from alignment at S-dermatodea_contig8463:333..8490- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig8463.16634.1 ID=mRNA_S-dermatodea_contig8463.16634.1|Name=mRNA_S-dermatodea_contig8463.16634.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=8158bp|location=Sequence derived from alignment at S-dermatodea_contig8463:333..8490- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig8463:333..8490- >mRNA_S-dermatodea_contig8463.16634.1 ID=mRNA_S-dermatodea_contig8463.16634.1|Name=mRNA_S-dermatodea_contig8463.16634.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=4224bp|location=Sequence derived from alignment at S-dermatodea_contig8463:333..8490- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |