prot_S-dermatodea_contig846.16630.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig846.16630.1
Unique Nameprot_S-dermatodea_contig846.16630.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length116
Homology
BLAST of mRNA_S-dermatodea_contig846.16630.1 vs. uniprot
Match: D8LPZ9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPZ9_ECTSI)

HSP 1 Score: 120 bits (302), Expect = 1.840e-29
Identity = 57/66 (86.36%), Postives = 61/66 (92.42%), Query Frame = 0
Query:   28 DTPITLRKSCDLCVRLKRACDGKNPCHLCMRRRETCTRSVKRKSGPAKGTKYTTRRQRLEAGIPDP 93
            D  + LRKSCDLCVRLKRACDGKNPCHLC+RRRETCTRSVKRKSGPAKGTKYTTRR R+EAGI +P
Sbjct:   57 DGRVLLRKSCDLCVRLKRACDGKNPCHLCLRRRETCTRSVKRKSGPAKGTKYTTRRSRMEAGIAEP 122          
BLAST of mRNA_S-dermatodea_contig846.16630.1 vs. uniprot
Match: A0A6H5L7F3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7F3_9PHAE)

HSP 1 Score: 117 bits (293), Expect = 1.680e-28
Identity = 65/100 (65.00%), Postives = 75/100 (75.00%), Query Frame = 0
Query:    1 MSQSFDGIVGASPRNAAAEGNTLQVLSDTP-ITLRKSCDLCVRLKRACDGKNPCHLCMRRRETCTRSVKRKSGPAKGTKYTTRRQRLEAGIPDPPSSRSK 99
            MS++     G     A+  GN  Q  +D   + LRKSCDLCVRLKRACDG++PC LC+RRRETCTRSVKRKSGPAKGTKYTTRR R+EAGI +P SS SK
Sbjct:    1 MSENGGSPAGEVVAAASDTGNEGQPTTDGGRVLLRKSCDLCVRLKRACDGQSPCQLCLRRRETCTRSVKRKSGPAKGTKYTTRRVRMEAGIAEPASSSSK 100          
BLAST of mRNA_S-dermatodea_contig846.16630.1 vs. uniprot
Match: D7FPF9_ECTSI (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPF9_ECTSI)

HSP 1 Score: 91.3 bits (225), Expect = 4.560e-19
Identity = 43/58 (74.14%), Postives = 47/58 (81.03%), Query Frame = 0
Query:   28 DTPITLRKSCDLCVRLKRACDGKNPCHLCMRRRETCTRSVKRKSGPAKGTKYTTRRQR 85
            D  I LRKSCD CVRLKRACDGKNPC LC RR + CTRS ++KSGPAKGTKY  RR+R
Sbjct:   13 DPTIELRKSCDYCVRLKRACDGKNPCSLCARRHKPCTRSARKKSGPAKGTKYAPRRKR 70          
BLAST of mRNA_S-dermatodea_contig846.16630.1 vs. uniprot
Match: A0A6H5L009_9PHAE (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L009_9PHAE)

HSP 1 Score: 90.9 bits (224), Expect = 6.220e-19
Identity = 42/58 (72.41%), Postives = 47/58 (81.03%), Query Frame = 0
Query:   28 DTPITLRKSCDLCVRLKRACDGKNPCHLCMRRRETCTRSVKRKSGPAKGTKYTTRRQR 85
            D  + LRKSCD CVRLKRACDGKNPC LC RR + CTRS ++KSGPAKGTKY  RR+R
Sbjct:    5 DPTVELRKSCDYCVRLKRACDGKNPCSLCARRHKPCTRSARKKSGPAKGTKYAPRRKR 62          
BLAST of mRNA_S-dermatodea_contig846.16630.1 vs. uniprot
Match: D8LKM5_ECTSI (Zinc finger transcriptional regulator n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKM5_ECTSI)

HSP 1 Score: 75.1 bits (183), Expect = 1.930e-13
Identity = 34/53 (64.15%), Postives = 40/53 (75.47%), Query Frame = 0
Query:   33 LRKSCDLCVRLKRACDGKNPCHLCMRRRETCTRSVKRKSGPAKGTKYTTRRQR 85
            LRKSCD CVR+KR C G  PC LC RR + C RS+K++SGPAKGTKY  R+ R
Sbjct:   23 LRKSCDYCVRMKRGCSGGTPCALCNRRNKNCIRSIKKRSGPAKGTKYCKRKPR 75          
BLAST of mRNA_S-dermatodea_contig846.16630.1 vs. uniprot
Match: A0A835Z8Y1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8Y1_9STRA)

HSP 1 Score: 67.0 bits (162), Expect = 1.460e-10
Identity = 30/49 (61.22%), Postives = 38/49 (77.55%), Query Frame = 0
Query:   33 LRKSCDLCVRLKRACDGKNPCHLCMRRRETCTRSVKRKSGPAKGTKYTT 81
            LR+SC+LCV+LKR C G +PC LC+R+   C R+ KR SGPAKGT+Y T
Sbjct:  412 LRRSCNLCVQLKRKCSGDSPCTLCVRKGIECVRAFKRPSGPAKGTRYVT 460          
BLAST of mRNA_S-dermatodea_contig846.16630.1 vs. uniprot
Match: A0A836CI83_9STRA (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CI83_9STRA)

HSP 1 Score: 61.6 bits (148), Expect = 1.130e-8
Identity = 31/68 (45.59%), Postives = 41/68 (60.29%), Query Frame = 0
Query:   17 AAEGNTLQVLSDTPITLRKSCDLCVRLKRACDGKNPCHLCMRRRETCTRSVKRKSGPAKGTKYTTRRQ 84
            A  G   Q+ +     LR+SC+LCV LKR C G  PC LC R+ + C R+ KR SGP KG +Y + +Q
Sbjct:   36 AQRGAEQQLPTGRAPQLRRSCNLCVSLKRKCSGDQPCTLCARKGKECIRTFKRPSGPQKGMRYASIKQ 103          
BLAST of mRNA_S-dermatodea_contig846.16630.1 vs. uniprot
Match: D8LM00_ECTSI (Zn(2)-C6 fungal-type domain-containing protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LM00_ECTSI)

HSP 1 Score: 61.2 bits (147), Expect = 1.540e-8
Identity = 28/51 (54.90%), Postives = 34/51 (66.67%), Query Frame = 0
Query:   28 DTPITLRKSCDLCVRLKRACDGKNPCHLCMRRRETCTRSVKRKSGPAKGTK 78
            DT + LR +CD C R+KR CDG  PC+ C RR   C  S K+KSGP KG+K
Sbjct:  202 DTMVVLRSACDACHRMKRKCDGLQPCNRCRRRSRPCGYSYKQKSGPPKGSK 252          
BLAST of mRNA_S-dermatodea_contig846.16630.1 vs. uniprot
Match: A0A6H5JM19_9PHAE (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JM19_9PHAE)

HSP 1 Score: 61.2 bits (147), Expect = 1.580e-8
Identity = 28/51 (54.90%), Postives = 34/51 (66.67%), Query Frame = 0
Query:   28 DTPITLRKSCDLCVRLKRACDGKNPCHLCMRRRETCTRSVKRKSGPAKGTK 78
            DT + LR +CD C R+KR CDG  PC+ C RR   C  S K+KSGP KG+K
Sbjct:  178 DTMVVLRSACDACHRMKRKCDGLQPCNRCRRRSRPCGYSYKQKSGPPKGSK 228          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig846.16630.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 9
Match NameE-valueIdentityDescription
D8LPZ9_ECTSI1.840e-2986.36Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L7F3_9PHAE1.680e-2865.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FPF9_ECTSI4.560e-1974.14Zn(2)-C6 fungal-type domain-containing protein n=1... [more]
A0A6H5L009_9PHAE6.220e-1972.41Zn(2)-C6 fungal-type domain-containing protein n=1... [more]
D8LKM5_ECTSI1.930e-1364.15Zinc finger transcriptional regulator n=1 Tax=Ecto... [more]
A0A835Z8Y1_9STRA1.460e-1061.22Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CI83_9STRA1.130e-845.59Zn(2)-C6 fungal-type domain-containing protein n=1... [more]
D8LM00_ECTSI1.540e-854.90Zn(2)-C6 fungal-type domain-containing protein (Fr... [more]
A0A6H5JM19_9PHAE1.580e-854.90Zn(2)-C6 fungal-type domain-containing protein n=1... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036864Zn(2)-C6 fungal-type DNA-binding domain superfamilyGENE3D4.10.240.10coord: 31..89
e-value: 3.6E-6
score: 28.8
IPR036864Zn(2)-C6 fungal-type DNA-binding domain superfamilySUPERFAMILY57701Zn2/Cys6 DNA-binding domaincoord: 30..70
IPR001138Zn(2)-C6 fungal-type DNA-binding domainPFAMPF00172Zn_cluscoord: 35..69
e-value: 1.2E-4
score: 22.1

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig846contigS-dermatodea_contig846:8820..17035 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig846.16630.1mRNA_S-dermatodea_contig846.16630.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig846 8820..17035 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig846.16630.1 ID=prot_S-dermatodea_contig846.16630.1|Name=mRNA_S-dermatodea_contig846.16630.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=116bp
MSQSFDGIVGASPRNAAAEGNTLQVLSDTPITLRKSCDLCVRLKRACDGK
NPCHLCMRRRETCTRSVKRKSGPAKGTKYTTRRQRLEAGIPDPPSSRSKA
SKARSKASGGGGVNAG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036864Zn2-C6_fun-type_DNA-bd_sf
IPR001138Zn2-C6_fun-type_DNA-bd