prot_S-dermatodea_contig8441.16613.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig8441.16613.1
Unique Nameprot_S-dermatodea_contig8441.16613.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length137
Homology
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BLAST of mRNA_S-dermatodea_contig8441.16613.1 vs. uniprot
Match: D8LKX6_ECTSI (Similar to ubiquitin specific protease 48 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKX6_ECTSI)

HSP 1 Score: 121 bits (303), Expect = 3.240e-29
Identity = 66/127 (51.97%), Postives = 83/127 (65.35%), Query Frame = 0 
Query:   11 KGVKRKYRFISADGWDMVRKRFPLAAEMEYPAGTPPCSTCQEQDEGETQLKLDRRNAKSAEMLNGPSLKGLWRRGGALPPKLTALHRGGVS--------------RDDGAVSSERFFLVEAWWLSAW 123
            K  +RKYR+IS  GW+MV+  FPLA E+EYPAGT PCS C+EQD+ E +LKLD R AKSAE++ GPSLKGLW+R  ALPP+L A  RGG S              R  G  +  RF LV  +W+ ++
Sbjct: 1558 KSGRRKYRWISPRGWEMVKNLFPLAEEVEYPAGTQPCSQCEEQDKDEMKLKLDLRQAKSAELVTGPSLKGLWKRSDALPPRLLAHSRGGSSSSSNSRQASLKARGRPGGGGTLPRFLLV--FWVRSY 1682
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BLAST of mRNA_S-dermatodea_contig8441.16613.1 vs. uniprot
Match: A0A6H5L6A7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6A7_9PHAE)

HSP 1 Score: 72.4 bits (176), Expect = 4.000e-12
Identity = 38/70 (54.29%), Postives = 47/70 (67.14%), Query Frame = 0 
Query:   15 RKYRFISADGWDMVRKRFPLAAEMEYPAGTPPCSTCQEQ---------DEGETQLKLDRRNAKSAEMLNG 75
            RKYR+IS  GW+MV+  FPLA E+EYPAGT PCS C+EQ         D+ E +LK   R AKSAE++ G
Sbjct: 1069 RKYRWISPRGWEMVKSLFPLAQEVEYPAGTQPCSQCEEQVVGATTKEQDKDEMKLKRGLRQAKSAELVTG 1138
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig8441.16613.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LKX6_ECTSI3.240e-2951.97Similar to ubiquitin specific protease 48 n=1 Tax=... [more]
A0A6H5L6A7_9PHAE4.000e-1254.29Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig8441contigS-dermatodea_contig8441:3354..8383 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig8441.16613.1mRNA_S-dermatodea_contig8441.16613.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig8441 3354..8383 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig8441.16613.1 ID=prot_S-dermatodea_contig8441.16613.1|Name=mRNA_S-dermatodea_contig8441.16613.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=137bp
MPCRKKTSSRKGVKRKYRFISADGWDMVRKRFPLAAEMEYPAGTPPCSTC
QEQDEGETQLKLDRRNAKSAEMLNGPSLKGLWRRGGALPPKLTALHRGGV
SRDDGAVSSERFFLVEAWWLSAWRSHHDSSGVLSEPP
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