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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 5 |
| Model size | 583 |
| Cds size | 582 |
| Stop | 0 |
| Start | 0 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig844.16611.1 >prot_S-dermatodea_contig844.16611.1 ID=prot_S-dermatodea_contig844.16611.1|Name=mRNA_S-dermatodea_contig844.16611.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=194bp
QVASAASKAKEEAAKTEKAKEFLQQRIEALRTELTAASTGWTNMNDDLRG
ICQERDTLHKKITNVQAQVTSAASKAKEEAAKTEKAKEDFQHRIEALRAE
LTAASTGWKNVKDDLRGICQERDTLRKEAQTRKRVGTMAPGPVIPASLLP
SIMAGLATIASPEALVAAAAAAAQSSGDAPASEVPTPAENEGAG back to topmRNA from alignment at S-dermatodea_contig844:619..6493- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_S-dermatodea_contig844.16611.1 ID=mRNA_S-dermatodea_contig844.16611.1|Name=mRNA_S-dermatodea_contig844.16611.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=5875bp|location=Sequence derived from alignment at S-dermatodea_contig844:619..6493- (Saccorhiza dermatodea SderLu1190fm monoicous)
CAGGTAGCTTCCGCGGCTAGCAAGGCCAAGGAAGAGGCGGCCAAGACCGA
GAAGGCCAAGGAATTCCTCCAGCAACGTATAGAGGTAATACAGCGCCGTC
GAATATATTTTGATGTATTTTCCGTGATATATTTATTTTGCCTTGAATGA
CCGAACTGCAAAGCCAGGCACCATCGCTTTGAGGCGGTGGATGCCACGTT
CTGGCATAACGCCTTCCCTCCGCTCTTCTGCCCGGACCCTACACCTTCCG
TCACTTGGCTTGATATATTTTATGTACATATTGTAGCAGCCCTGGCCGTA
GCAGCCTTGGCCATAGTGAAATATGGTGATGATGGATGCGTCGCCAAGAG
CGCCGCAGGTCGAATCCCATTGCCTCCGGTTTTTGCCGTTTTTGTTATTT
TCTCTTTCTCGCTTATCACGTACTTTTTTTATATGCAGGAGTAGGCATAT
AGTATTGTTCCACTCCTCCAGGATTACGTGCGTAACTGACCACGCATCTG
ACCACGAGGCGGGTCGGATTTAGCCAATCAACTACAAGTACGAAGATGAT
CACCACCCTCCCACAAGGTCGCTCGTGGCGCAGCTCTAGGTGCCGCTCGT
GCAATGTCCGGGCAGTACTTGAGTCCGCTGTCCGTAATCTCCAGTTTAAC
CTCGGCGCGTTCCTACTAACATATTTCTCGACAAAATATCACGCAGGCAT
TGCGCACAGAGCTCACCGCGGCGTCGACGGGTTGGACGAACATGAATGAC
GACCTTAGAGGGATATGCCAGGAACGGGATACCCTTCATAAAAAGGTGCA
GCAGGGTGTTTTGGATTGATGTCGTCAGTGTTGCATGTGCTCTCAGCAGA
GGGTTGTGACAAGAGCATTTGAGGGGGCAGCTCCTTCATTGAAAACATGA
GCGGTATTGTCTGAGCTTCTGCTGCGGTTGAATAATTGACGGGCTACCCT
GAAGCACAAGCTTTGGACTGCATCGCGCGGAAAAAGCGAAACGAAAAAGG
CCGCTCCCATTCGGATGACAATCGGGACCTGGGGCATGTCAAAGAGCCCC
TATGCTCCTCGAGGTTGAGCTAGTTTGTGGCCCACTTGAAAGTGGTAATA
TTTTACCGGACGTCTTTTTGTTTTTCTCGGCAGATTTCTTGCAGTGAACA
AAACGTTAAATATAGTTTTTTCTCTTGAACGTTTCTCCGAGAATAGTTAT
GTTTCCCATTTTATAAGAAGAAAACGTATGGGAACAATAGGGGCGCCTAA
ACAATTGTACCTATCCGATTGGAGTTCGATCATACTAAGATCAGAATCCG
ATCGGACCCCGATCGGACCATCAAAGGCTAATCGGACTCTGATCGTACCG
GCCCGATCGGATCGGTCCGATCAGCGTCCGATCAGACTCTGAGTCTGATT
GGAGTCCGATGTTGGACTCCGATCGTCCGAGATCGGACTAATCTAAGTCA
ACATTAAACCTACATAGATAGGTGTTATAGTTTTTGTTGCTTTTGCTTTG
TCGTATCATACGTACATAGCTTTTGCGATACCTGACGTTACAAGAGGAGA
AAATTGGTATACAGTGTGAAGAGTTTGCCGAGAAAGTTATGATAACCCAG
CTAGCTTAAAACATATTATTTGTGTTTTGAAAGCGTTGGCACGGGTCCTC
GCGCGTCGACCCAACCCGCCCTAACGCTTACCCTAACCCTAACCCAGGCA
CGTTTGAGCCAAATTTCCTCAAATTTCCGGATCGGAGTCCGCTCGGAGTG
GTACAATAGTACTTGGCCTTGGAAAAATACCGAAACCTTTCTCGAGCAAA
AAGCTGGGGAAACAGTCACGTTGTCATAAAAAATGTTGCTCGCCTACGAT
AAACTATACAGATATTTTAACTGCTTGGATTGATAGATTTTCACACTAAC
AACCGACCGGCCTGCCATTTTTGCAGTTTCACAAGTGGATGCTGAGCCCG
CTCGTGGTCATATGAAGGCACAAGCGCAAGTGAAAACCGGCACCCCTACA
CCCAACCAAATCCTTAGGCCCAGACATGACAGAGATAGATGCAACCCGCA
CGCCGCCCGGAGCGCCTGATCCCCTGATTTTACAGGAAAAGTATCATAAT
AATGTGCTATGATATAAGCACGAGCTACAGGATTTATGTCTGACTTGCTG
CCTGTCACCAATATACTATATCATACAATAGGTAGGTAATGCCAAGCTAC
AGAAATTACTGCCTGAAGTGCTGCTAGCACCGCCATAGGACACGAACAAA
CACCAGCATCCATGATCAGATGTCAAAGCGTATCCCACCACGACGCGACA
AGGCCAATAACTACTGAAAAATACAAAAGAGCACCCTCCCGACGATCAGC
CCGGGCCGCACCCGTTGCAGCACCACAACAAGAGTATGTGTCGCTTACCC
ACGCAGAGCGCTCTCGGCAAAGGCACAAGCGTAAACACATGCAAGCCCGA
ATTTACCTGCAGTATGCCCGCCTCTCTACAAAACCCATGACACAAAAATT
GCTTCCCAGGAAAAACGAAGAAAAAGAAACTCCGCCCCGTGCTCGGCGAC
GTCGGCCTTCGTCTTGCTCGTTGTCGCGCCAGCCAAATCCTATCGCTTGA
GCATTGGTGCACCAGCCACCCCCTCGGCCCTCCTCCCCACACTCCGGGTG
TTCCCTTGGTAGCCCTGTCAATCTGTACTCCGGTTGATCTTGCCCATGCC
ATGAAAACAAAGTGCCTTTGAACAGACAATAAAATCCGTGCGTCACGTGC
AACACACGTCTACACCACGCCACGCGGCTCCGTGGGGCAAAGGCGATGAA
TGATGTGAAATGAAACAGGTGATTCGCGCGCCGGTTGCCTTGCACGCCTC
AATATCTTGATCGATGCAGCAGCAGTAGTTGTAATCGCTAACTGCTGTAA
CACGCTGCGATCTGCTGTGGCGACGGCGTGATGATCCCTCCCACGATTGT
TCCTCGCGGATACGAGAATCCTCTATCTGCACCAACGCGCACCTGCAGCT
GTCGACCTCGGAAAAGTCACGAAGGCTCGACGCGGTGGAAAAATGTCCAG
ATGCCCGGGATTGGCGACCCGCGCTCTCTATCGAGTCCAAGTATCGGAAC
TAACCGCTCGCTTTCGTGTTCTCCACTCGATTGATTTTTTCTGCCTCACT
ACTTTGGAGCTCAACGTCCTCGTATACATAGTGGGGTGCGCTGTCTAGCT
TGGGATAGGTGGCGTGTGTGTCTCAGGCAGACCCCTGCCAAACAGCCCCT
ATGTTGTGTTTTCTCTCCGGGGATAACTTGGCCGAGAGAAGCTTCACAGG
CGTTTCCCTCCTAAGATGTCCTTCTATTTTTCGATGGCTTTTCTTTCTCA
ACACAATTTGGTATCGCAGTGTGTGCTAAAAAACAATGCAGATCGCATCC
CGCGGATCATCTCTGACGCTCCGTTTTGCTTAGGCGTAGAGTGCGATTTT
GTACCCGAACAACAGACTCCCGATTCGGCCGTGGTTTCCAAACCGTTGTT
GTGTAATAGCGCGTGCTGGTTCAACGTGAGGCATACTTTACCTGCAGAAA
TTTCCAATGTAGCAAGCTGTCTCGATATTGACTGATTGCGGCTAGTTATG
GTGCCCTCCTGAGGCATGCCCATCCCGACAGCACTGTGGCAAACGTCTGC
GTGGAAGTGCGTGTGGTCCTATTGCGTGGAAAAGCGTGTGACCCTATTTT
CGATACAAGCGTAGTTCTTCGTCAGCCTTACCGCCCCTTCAATAATGTTT
GGGTCCACACATACATGTGGTACTTGCTTTGCTTCGGGATTTTCTTCTTG
TTGATCCTGATTGGGGCCCTCAAGGGATTTGTGATACTTGATTGTGTTTT
TCATTTCGCCGTCTACCTTATCACGGCACTATCCACGAGATTCAGACAAT
TGTAGCGATTGCTTTGCCAGTATTCTCGTTCGCGGGTGATCCCGTTTGTT
TGTCATCGAGTGTGTTGGTTTTAGGCCCCGTGATTCCTCGATCTTGATAT
ATATCACGGCTGCGTTTTCGATCAGTCAATTCAATAACATCAACGGCAAG
AACTGCTGTAAAGCTGACTACGGTGCGAGCTTCTTTCGTCCAGCGCCTTC
CCGTGCTTTTCAATTGAAATGGCTCAGTTAATCTTCCGTTTGGTCTCAAT
GTCGTTTTTCTCCCTTGGGCGCTTCGTTCTACTTGGTAAAAGATTACGAA
TGTCCAGGCGCAGGTAACTTCCGCGGCTAGCAAGGCCAAGGAAGAGGCGG
CCAAGACGGAGAAGGCCAAGGAAGACTTCCAGCATCGTATAGAGGTAATA
TTGCGCCGTCGGACATGCTTTAATGTATTATTTAGTTATATCTTTATTTT
GCCTTAAATGACCGAATTGCAAAACCAGGCACCATAGCTTTGAGGCAGTA
GGTGCCACGTTCTGGCGCAATGCGTTGCCTCTTTCTTCTGACCGAACCCT
TGACCTTCCGACATTTGTCTTGATTGTATAAATGTACGTATATTATGCCG
TTCCAGCCGTAGCAGCCTTGGCCCTAGTGAAACATGGTGATGGTGGATGC
GTCGCCAAGAGCGCCGCAGGTGGAATGCCATCGCCTCCGGTTTTTCTCGT
TTAAGTTATTTTCTCTCTCTTTTTTCACGTACTCTTGATATGCAGGAGAA
AATCTATAGTAGCGTTCCACTCCTCCGTGATTACGTGCGTAACTGACCAC
GCATCTGACCACGAGTCGGGTCGGACTTAGCCAATCAACTACAAGTACGA
AAATGGCCCCCACCCTCCCACAAGGTCGCTCGTGCCGCAGCTCTAAATGC
CGCTCGTGTATGTCTGGGCAGTGCTTGTAGTCCGCTGTCCGTAATCTCCA
GTTTAACCTCGACGTGTTCGTACTAAAATCCTCTCGACAAATTATCTCGA
CAAATTATCACGCAGGCATTGCGTGCAGAGCTCACCGCGGCGTCGACGGG
TTGGAAGAACGTCAAGGACGACCTCAGAGGGATATGCCAGGAACGGGATA
CCCTTCGCAAAGAGGTGCAGCAAGCTGTTTTGGATGGGTGCCATCGGTGT
TGCATGGGCTCTCAGCAGAGGATTGTGCCAAGAGTATTTGAGGAGGAAGC
TCCTTCATTGAAAACATGGGCGGTAGTGTCTGAGCGTCTGCTGCGATTAA
ACAATTGATGGTTTACCCTGAAGCACAATCTTTGAACCATATCGCGCGGA
AAAAGAGAAACGAGAAAGGCCGCTCTTATTCGGATGACAATCGGGACCTG
GAGCATGTCAAAGAGCCCCTGTGCTCCGCGAGGTTCGACCTAGTTTGTGG
CCCACTTGAAAGTGGTTCTATTTCAACACACGTGATTGTGTTTTCTCGGC
ACATTTCTTGCAGAGAAGAAAAAGTAATACATGTATTTTGTTGTTCAATT
TCCTCTGCGACCATTTCTTTTCCCCATTTTAGAGGAGGACAACGTGTGGG
AAAAACACCGGAACCTTTCTCGAGCAAAAATCTGGAAAAATAGTCACATT
GCCATCATAATAAGATATGTTGCTCGCCTTCTATAAACTATACAGTATCA
ACCGACGATAAAACGTGAGGAAATCGAAATTGGTTCACGGGCAGCCCCCG
TACACGTAACACCACGCGGCTCCGTAGGAGCTGACTTAATATAATCACGT
TTCTGCCGCCCGTCGATTACGCCTAAGGCCCAGACGAGGAAAAGGGTAGG
CACGATGGCTCCAGGACCAGTGATTCCAGCGAGCTTGCTGCCATCAATTA
TGGCTGGCCTGGCAACGATTGCATCACCGGAGGCACTTGTAGCGGCGGCA
GCAGCAGCGGCGCAATCCTCAGGAGATGCACCAGCATCCGAAGTACCAAC
GCCAGCAGAAAACGAGGGGGCGGGG back to topCoding sequence (CDS) from alignment at S-dermatodea_contig844:619..6493- >mRNA_S-dermatodea_contig844.16611.1 ID=mRNA_S-dermatodea_contig844.16611.1|Name=mRNA_S-dermatodea_contig844.16611.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=1164bp|location=Sequence derived from alignment at S-dermatodea_contig844:619..6493- (Saccorhiza dermatodea SderLu1190fm monoicous)
CAGGTAGCTTCCGCGGCTAGCAAGGCCAAGGAAGAGGCGGCCAAGACCGA
GAAGGCCAAGGAATTCCTCCAGCAACGTATAGAGCAGGTAGCTTCCGCGG
CTAGCAAGGCCAAGGAAGAGGCGGCCAAGACCGAGAAGGCCAAGGAATTC
CTCCAGCAACGTATAGAGGCATTGCGCACAGAGCTCACCGCGGCGTCGAC
GGGTTGGACGAACATGAATGACGACCTTAGAGGGATATGCCAGGAACGGG
ATACCCTTCATAAAAAGGCATTGCGCACAGAGCTCACCGCGGCGTCGACG
GGTTGGACGAACATGAATGACGACCTTAGAGGGATATGCCAGGAACGGGA
TACCCTTCATAAAAAGATTACGAATGTCCAGGCGCAGGTAACTTCCGCGG
CTAGCAAGGCCAAGGAAGAGGCGGCCAAGACGGAGAAGGCCAAGGAAGAC
TTCCAGCATCGTATAGAGATTACGAATGTCCAGGCGCAGGTAACTTCCGC
GGCTAGCAAGGCCAAGGAAGAGGCGGCCAAGACGGAGAAGGCCAAGGAAG
ACTTCCAGCATCGTATAGAGGCATTGCGTGCAGAGCTCACCGCGGCGTCG
ACGGGTTGGAAGAACGTCAAGGACGACCTCAGAGGGATATGCCAGGAACG
GGATACCCTTCGCAAAGAGGCATTGCGTGCAGAGCTCACCGCGGCGTCGA
CGGGTTGGAAGAACGTCAAGGACGACCTCAGAGGGATATGCCAGGAACGG
GATACCCTTCGCAAAGAGGCCCAGACGAGGAAAAGGGTAGGCACGATGGC
TCCAGGACCAGTGATTCCAGCGAGCTTGCTGCCATCAATTATGGCTGGCC
TGGCAACGATTGCATCACCGGAGGCACTTGTAGCGGCGGCAGCAGCAGCG
GCGCAATCCTCAGGAGATGCACCAGCATCCGAAGTACCAACGCCAGCAGA
AAACGAGGGGGCGGGGGCCCAGACGAGGAAAAGGGTAGGCACGATGGCTC
CAGGACCAGTGATTCCAGCGAGCTTGCTGCCATCAATTATGGCTGGCCTG
GCAACGATTGCATCACCGGAGGCACTTGTAGCGGCGGCAGCAGCAGCGGC
GCAATCCTCAGGAGATGCACCAGCATCCGAAGTACCAACGCCAGCAGAAA
ACGAGGGGGCGGGG back to top
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