prot_S-dermatodea_contig8439.16609.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig8439.16609.1
Unique Nameprot_S-dermatodea_contig8439.16609.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length304
Homology
BLAST of mRNA_S-dermatodea_contig8439.16609.1 vs. uniprot
Match: D7FVF6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FVF6_ECTSI)

HSP 1 Score: 444 bits (1142), Expect = 5.570e-154
Identity = 230/309 (74.43%), Postives = 262/309 (84.79%), Query Frame = 0
Query:    1 MGHFQQVRVVAASEISEPDWSRLAT---LNKIGGGDDV---SLPYVTVSLGQCSERTSAREALPDATGTLRAAWPKELLSVEALKGFIGPGQYTHLGVQVYNQDSVVQSVLSSAVSTVMGSKGSLLGAGSLEVSPLLSGGVHLIDTWVELEPRGRVHLHVDYEPKGIEPGPNDVVFLESFARWEDSLVLPPGAPMVVLSMCRPFLLVAFDTFTGREGRLRLHRNCVSVVERLTWLDVTLATLARPVDAMLRTDTGSWVVRKSRPLVHPLIVMAAPLQASLLVAFSALKVAIRGAIMGTQAVYHESVANN 303
            MGHFQ +RVVAASEISEPDWSR+ +   +N I         +LPYV VSLG+C+ R+SAREA PD+ GTLRA+WP+ +LSVE +KG I PG+   L VQVYNQDS+VQSVLSSAVSTVMGS+GSLLGAG L+VS LLSGG HLIDTWVELEP+GRVH+HV+YEPKGI+P  NDVVFLESFARW DSLV+PPG PMVVL    PFLLVAFDTFTGREGRLRLHRN VS+VERL+WLDV+LA LARPVDA+LRTDTGSW VRKSRPL+ PLIV+ APLQASLLVAFSALKVA++G +MGT AVY E+V NN
Sbjct:   66 MGHFQ-IRVVAASEISEPDWSRVTSNLNINAIXXXXXXXXSALPYVAVSLGKCTVRSSAREAQPDSLGTLRASWPRGMLSVEVMKGDIRPGELPRLAVQVYNQDSIVQSVLSSAVSTVMGSRGSLLGAGELDVSSLLSGGAHLIDTWVELEPKGRVHVHVEYEPKGIQPEKNDVVFLESFARWGDSLVIPPGVPMVVLDSKPPFLLVAFDTFTGREGRLRLHRNTVSLVERLSWLDVSLAMLARPVDALLRTDTGSWCVRKSRPLLQPLIVIVAPLQASLLVAFSALKVALKGVLMGTHAVYQEAVVNN 373          
BLAST of mRNA_S-dermatodea_contig8439.16609.1 vs. uniprot
Match: A0A7S1UJC0_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UJC0_9STRA)

HSP 1 Score: 130 bits (328), Expect = 1.150e-31
Identity = 101/332 (30.42%), Postives = 155/332 (46.69%), Query Frame = 0
Query:    8 RVVAASEISEPDWSRLATLNKIGGGDDVSLPYVTVSLGQCSERTSAREALPDATGTLRA----AWPKELLSVEALKGFIGPGQYTHLGVQVYNQDSVVQSVLSSAVSTVMGSKGSLLGAGSLEVSPLLSGGVHLIDTWVEL------------------EPRG-------------RVHLHVDYEPKGIEPGPNDVVFLESFARWEDSLVLPPGAPMVVLSMCRPFLLVAFDT-FTGREGRLRLHRNCVSVVERLTWLDVTLATLARPVDAMLRTDTGSWVVRKSRPLVHPLIVMAAPLQASLLVAFSALKVAIRGAIMGTQAVYHESVANN 303
            RVV A  +   DWS L  L       +V+ PYV +S+G   E       +P  TG +R      W  E   +  LK  +  G    L VQ ++ ++VV  VL + ++       + LG G +E+S LL G   ++D WV L                  EPR               VH+ V+YEP+G+ P   D+V+LE FAR   + ++PPG PM V+ M   + LV F + ++  + +L++HRN + VVERLT +D    +   P D +  T  G +V R + P V  +  + AP+  +  V    +++A+R A  G  A     V N+
Sbjct:   50 RVVEAKNLRRLDWSYLQPL---ASAQNVN-PYVKLSMGGDEEIR-----MPICTGVVRGNCNPTWVSEKFILPVLKSAVRSGIAVTLDVQAFHSENVVARVLPNMITG-----NNSLGLGQVELSALLLGEAQVLDVWVPLQTGAHSKVKGGKGEESKDEPRPGAPLQPVVDEFAPAVHIVVEYEPEGLHPQRGDIVYLEPFARSPVNQIIPPGEPMAVIEMSGSYALVGFQSGYSEFKCQLKIHRNAIFVVERLTLVDGIWKSALAPTDYLFGTRVGRFVRRTTGPYVSYVNTLLAPVYFASNVGIGTVRLAVRSAAAGVAATGSTVVGND 367          
BLAST of mRNA_S-dermatodea_contig8439.16609.1 vs. uniprot
Match: W7TJW2_9STRA (C2 domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TJW2_9STRA)

HSP 1 Score: 124 bits (310), Expect = 1.790e-29
Identity = 78/185 (42.16%), Postives = 107/185 (57.84%), Query Frame = 0
Query:  114 GSKGSLLGAGSLEVSPLLSG--GVHLIDTWVELEPR-GRVHLHVDYEPKGIEPGPNDVVFLESFARWEDSLVLPPGAPMVVLSMCRPFLLVAFDTFTGREGR---------LRLHRNCVSVVERLTWLDVTLATLARPVDAMLRTDTGSWVVRKSRPLVHPLIVMAAPLQASLLVAFSALKVAIR 286
            GSKG  LG+GSL++ PLL+G  G H++D WV L P  GR+H+ V+YEP G+ P  +DVVF E+FAR   SLVLP   PMVV ++   +LLV F T T R+ R         LR+HR  V V+ER T LD    ++    D +       W  ++ +P      V+A P   SL V F+A ++A+R
Sbjct:  128 GSKGRDLGSGSLDILPLLNGSRGSHVMDEWVSLSPGPGRLHVVVEYEPVGMVPEMDDVVFFEAFARSPRSLVLPTNEPMVVRAVSGAYLLVGFRTPTARQARGPEAAPECRLRVHRQTVFVIERHTLLDAAWHSVIDAADMVQAVPPVRWAKKQLQPYAKYAQVLARPALTSLHVTFAAARLAMR 312          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig8439.16609.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FVF6_ECTSI5.570e-15474.43Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S1UJC0_9STRA1.150e-3130.42Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
W7TJW2_9STRA1.790e-2942.16C2 domain-containing protein n=3 Tax=Monodopsidace... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR035892C2 domain superfamilyGENE3D2.60.40.150coord: 4..159
e-value: 1.7E-6
score: 30.0
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..258
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 282..303
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 259..281
NoneNo IPR availableSUPERFAMILY49562C2 domain (Calcium/lipid-binding domain, CaLB)coord: 7..158

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig8439contigS-dermatodea_contig8439:2419..9093 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig8439.16609.1mRNA_S-dermatodea_contig8439.16609.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig8439 1648..9192 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig8439.16609.1 ID=prot_S-dermatodea_contig8439.16609.1|Name=mRNA_S-dermatodea_contig8439.16609.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=304bp
MGHFQQVRVVAASEISEPDWSRLATLNKIGGGDDVSLPYVTVSLGQCSER
TSAREALPDATGTLRAAWPKELLSVEALKGFIGPGQYTHLGVQVYNQDSV
VQSVLSSAVSTVMGSKGSLLGAGSLEVSPLLSGGVHLIDTWVELEPRGRV
HLHVDYEPKGIEPGPNDVVFLESFARWEDSLVLPPGAPMVVLSMCRPFLL
VAFDTFTGREGRLRLHRNCVSVVERLTWLDVTLATLARPVDAMLRTDTGS
WVVRKSRPLVHPLIVMAAPLQASLLVAFSALKVAIRGAIMGTQAVYHESV
ANN*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR035892C2_domain_sf