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Homology
BLAST of mRNA_S-dermatodea_contig8439.16609.1 vs. uniprot
Match: D7FVF6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FVF6_ECTSI) HSP 1 Score: 496 bits (1278), Expect = 5.210e-170 Identity = 253/341 (74.19%), Postives = 288/341 (84.46%), Query Frame = 1
Query: 4 YGPGGGAEIPVWKRELSFRGQPYRYANHQNGVMGHFQQVRVVAASEISEPDWSRLAT---LNKIGGGDDV---SLPYVTVSLGQCSERTSAREALPDATGTLRAAWPKELLSVEALKGFIGPGQYTHLGVQVYNQDSVVQSVLSSAVSTVMGSKGSLLGAGSLEVSPLLSGGVHLIDTWVELEPRGRVHLHVDYEPKGIEPGPNDVVFLESFARWEDSLVLPPGAPMVVLSMCRPFLLVAFDTFTGREGRLRLHRNCVSVVERLTWLDVTLATLARPVDAMLRTDTGSWVVRKSRPLVHPLIVMAAPLQASLLVAFSALKVAIRGAIMGTQAVYHESVANN 1008
YG E+P WKR+LSFRGQPYRYA+HQNGVMGHFQ +RVVAASEISEPDWSR+ + +N I +LPYV VSLG+C+ R+SAREA PD+ GTLRA+WP+ +LSVE +KG I PG+ L VQVYNQDS+VQSVLSSAVSTVMGS+GSLLGAG L+VS LLSGG HLIDTWVELEP+GRVH+HV+YEPKGI+P NDVVFLESFARW DSLV+PPG PMVVL PFLLVAFDTFTGREGRLRLHRN VS+VERL+WLDV+LA LARPVDA+LRTDTGSW VRKSRPL+ PLIV+ APLQASLLVAFSALKVA++G +MGT AVY E+V NN
Sbjct: 34 YGAAEDEEVPAWKRQLSFRGQPYRYAHHQNGVMGHFQ-IRVVAASEISEPDWSRVTSNLNINAIXXXXXXXXSALPYVAVSLGKCTVRSSAREAQPDSLGTLRASWPRGMLSVEVMKGDIRPGELPRLAVQVYNQDSIVQSVLSSAVSTVMGSRGSLLGAGELDVSSLLSGGAHLIDTWVELEPKGRVHVHVEYEPKGIQPEKNDVVFLESFARWGDSLVIPPGVPMVVLDSKPPFLLVAFDTFTGREGRLRLHRNTVSLVERLSWLDVSLAMLARPVDALLRTDTGSWCVRKSRPLLQPLIVIVAPLQASLLVAFSALKVALKGVLMGTHAVYQEAVVNN 373
BLAST of mRNA_S-dermatodea_contig8439.16609.1 vs. uniprot
Match: A0A7S1UJC0_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UJC0_9STRA) HSP 1 Score: 156 bits (394), Expect = 1.080e-38 Identity = 117/371 (31.54%), Postives = 174/371 (46.90%), Query Frame = 1
Query: 31 PVWKRELSFRGQPYRYANHQNGVMGHFQQVRVVAASEISEPDWSRLATLNKIGGGDDVSLPYVTVSLGQCSERTSAREALPDATGTLRA----AWPKELLSVEALKGFIGPGQYTHLGVQVYNQDSVVQSVLSSAVSTVMGSKGSLLGAGSLEVSPLLSGGVHLIDTWVEL------------------EPRG-------------RVHLHVDYEPKGIEPGPNDVVFLESFARWEDSLVLPPGAPMVVLSMCRPFLLVAFDT-FTGREGRLRLHRNCVSVVERLTWLDVTLATLARPVDAMLRTDTGSWVVRKSRPLVHPLIVMAAPLQASLLVAFSALKVAIRGAIMGTQAVYHESVANN*EWGVRARR 1035
P W +S+RG YRY +HQ VMG RVV A + DWS L L +V+ PYV +S+G E +P TG +R W E + LK + G L VQ ++ ++VV VL + ++ + LG G +E+S LL G ++D WV L EPR VH+ V+YEP+G+ P D+V+LE FAR + ++PPG PM V+ M + LV F + ++ + +L++HRN + VVERLT +D + P D + T G +V R + P V + + AP+ + V +++A+R A G A V N+ R RR
Sbjct: 21 PRWVSNMSYRGNAYRYLDHQQNVMGTVH-ARVVEAKNLRRLDWSYLQPL---ASAQNVN-PYVKLSMGGDEEIR-----MPICTGVVRGNCNPTWVSEKFILPVLKSAVRSGIAVTLDVQAFHSENVVARVLPNMITG-----NNSLGLGQVELSALLLGEAQVLDVWVPLQTGAHSKVKGGKGEESKDEPRPGAPLQPVVDEFAPAVHIVVEYEPEGLHPQRGDIVYLEPFARSPVNQIIPPGEPMAVIEMSGSYALVGFQSGYSEFKCQLKIHRNAIFVVERLTLVDGIWKSALAPTDYLFGTRVGRFVRRTTGPYVSYVNTLLAPVYFASNVGIGTVRLAVRSAAAGVAATGSTVVGNDRRNVRRTRR 376
BLAST of mRNA_S-dermatodea_contig8439.16609.1 vs. uniprot
Match: W7TJW2_9STRA (C2 domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TJW2_9STRA) HSP 1 Score: 144 bits (364), Expect = 5.290e-35 Identity = 110/326 (33.74%), Postives = 164/326 (50.31%), Query Frame = 1
Query: 22 AEIPVWKRELSFRGQPYRYANHQNGVMGHFQQVRVVAASEISEPDWSRLATLNKIGGGDDVSLPYVTVSLGQCSERTSA--REALPDATGTLRAAWPKELLSVEALKGFIGPGQYTHLGVQVYNQDSVVQSVLSSAVSTVMGSKGSLLGAGSLEVSPLLSG--GVHLIDTWVELEPR-GRVHLHVDYEPKGIEPGPNDVVFLESFARWEDSLVLPPGAPMVVLSMCRPFLLVAFDTFTGREGR---------LRLHRNCVSVVERLTWLDVTLATLARPVDAMLRTDTGSWVVRKSRPLVHPLIVMAAPLQASLLVAFSALKVAIR 957
A+ P+W+ E++ R PYRY +HQ G +G +R++ ++ + G VS P V + + R+S R A P +W +E ++ KG + G + Q + +S S + GSKG LG+GSL++ PLL+G G H++D WV L P GR+H+ V+YEP G+ P +DVVF E+FAR SLVLP PMVV ++ +LLV F T T R+ R LR+HR V V+ER T LD ++ D + W ++ +P V+A P SL V F+A ++A+R
Sbjct: 12 ADAPIWRPEMAVRQNPYRYLDHQKGTIG-ILDIRLIDGRDLDSTG------RGESGRSASVS-PQVVIRVPAEEARSSVVPRNAHP--------SW-QERFTMNLKKGVLQEGAPVLVVFQALDA--------ASWRSPLGGSKGRDLGSGSLDILPLLNGSRGSHVMDEWVSLSPGPGRLHVVVEYEPVGMVPEMDDVVFFEAFARSPRSLVLPTNEPMVVRAVSGAYLLVGFRTPTARQARGPEAAPECRLRVHRQTVFVIERHTLLDAAWHSVIDAADMVQAVPPVRWAKKQLQPYAKYAQVLARPALTSLHVTFAAARLAMR 312
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 447.2 |
| Seed ortholog evalue | 6.1e-123 |
| Seed eggNOG ortholog | 2880.D7FVF6 |
| EggNOG free text desc. | Protein kinase C conserved region 2 (CalB) |
| EggNOG OGs | 2CMP7@1,2QR5X@2759 |
| Ec32 ortholog description | C2 domain |
| Ec32 ortholog | Ec-14_000930.1 |
| COG Functional cat. | S |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| Hectar predicted targeting category | other localisation |
| Exons | 7 |
| Model size | 1782 |
| Cds size | 912 |
| Stop | 1 |
| Start | 1 |
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig8439.16609.1 >prot_S-dermatodea_contig8439.16609.1 ID=prot_S-dermatodea_contig8439.16609.1|Name=mRNA_S-dermatodea_contig8439.16609.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=304bp
MGHFQQVRVVAASEISEPDWSRLATLNKIGGGDDVSLPYVTVSLGQCSER
TSAREALPDATGTLRAAWPKELLSVEALKGFIGPGQYTHLGVQVYNQDSV
VQSVLSSAVSTVMGSKGSLLGAGSLEVSPLLSGGVHLIDTWVELEPRGRV
HLHVDYEPKGIEPGPNDVVFLESFARWEDSLVLPPGAPMVVLSMCRPFLL
VAFDTFTGREGRLRLHRNCVSVVERLTWLDVTLATLARPVDAMLRTDTGS
WVVRKSRPLVHPLIVMAAPLQASLLVAFSALKVAIRGAIMGTQAVYHESV
ANN* back to topmRNA from alignment at S-dermatodea_contig8439:1648..9192- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_S-dermatodea_contig8439.16609.1 ID=mRNA_S-dermatodea_contig8439.16609.1|Name=mRNA_S-dermatodea_contig8439.16609.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=7545bp|location=Sequence derived from alignment at S-dermatodea_contig8439:1648..9192- (Saccorhiza dermatodea SderLu1190fm monoicous)
AGTTACGGGCCTGGCGGTGGCGCGGAAATACCGGTGTGGAAAAGAGAGCT
GTCCTTCCGCGGACAGCCCTACAGATACGCGAACCACCAAAACGGAGTAA
TGGGCCATTTTCAGGTAACCCTCTGCTTCGTGTTTCCTTCTTAGCTGTGG
AGGTTACCCGGCGAGAGTGTAGCCACGCTTCGGTGCGATTTGAAATTGAA
ACGCCCAGCACTTTACCAGCCAAAACATGGAGCAGCAGGGTCTTGGCTTG
GACCGTGATGGCCCCCTTTTCTCGAAGGCTATTTCTCCGTTCGTGTGCCG
CTAATAATAGTTTATGTCTCCCTGTGGTTGCAGTATGGGCGGAACGCTGC
CTGCAAAGTGTACATTGTCTTCTTCCACACGCACACAGCATGGAAAGACC
TTGCTGTTTTAGACAACTGACAGCCGCCATCCAGATTTGACTTTGATCGC
AGCGAACGAGTTCCCTAGGTTGGTTTCTGCACGTCCGCTCCCACCTATTG
GCCCTTCACGCACCCGAACCTCCGGTGCATACCATCCGCGATAGAGCTCT
GCACTCTTCCACCTTTTCGCACATCTTCCCTGAACCCGCGTTTGTTTTAC
ATAGCCCCAGTTGATCTACGCCGTATGATTGCGATTGTCGGGTTTCGCCG
GCTGTCTTACGATGGCGCTACTCGCCAGAAGCGTCACAACTACAAGTACT
GCACTTGTAGCCAAGAGTTTGCCGACTTTGCCCCGTCAATTTGTTTTTCT
CGTGTTTTCGTTAATTTTATGTTTGATAGGGTAATGTTCGTTCCGTTAGG
GTTCTTGGCTCGATGATCTCGTGACCACAGCCGGGTGTTGAGATTGGTTG
ATGTGGGACCATCGCCATCACCACCATCGTCAATATCATTGCCATCGTCA
CTATCATCGTCATACCCGATGTTTTTGTTCGCGGATTGTTGTTGACGTCG
CTTGTTCCGCGGAGCAGGTTCGCGTGGTCGCCGCCTCGGAGATATCGGAA
CCAGACTGGTCGCGTCTGGCAACCCTGAATAAGATTGGCGGCGGGGATGA
CGTATCGCTTCCTTACGTCACCGTGTCGCTGGGGCAGGTGCTCGCCACGC
GCGTGACAGTGTACTGCACCGTGCTGTAAGCTAGCATAAATTTTATAGCT
GCATTCGTCTGCGTGACTCGTTTATCTCGATACGTCACCGTGTCGCTGGC
GTAGGTGCTCGCCACGCGCGTGACAGTGTACTGCACCGTGCTGTAAGCTA
GCATAAATGTTATAGCTGCATTCGTCTGCGTGGCTCGTTTATCTCGACGA
CTGTTCGACTTCATCCCGTGCTTTTGTTGCTGTGCGATACGGCGTGTTCC
TTTCTCTCCATAAAAGCCTGCACGAAAGACGATATCGCGACAGGGCTCCC
TAGCGCGCGCGCTCAACCGACGGTCATACGCCGGCTTCGGCGGTATAAGC
ACACGAACGCACGCGGTCATGGGATAGTTGCCTCGCGCAAAAATTCCACC
TGTAGTAGAGGAAAGCCGTGCGTCGGAAGGAAAAAGGACAGTAAGCCGTG
CGAATCGACAAGGACTGCATATTTTTTCCGTCTGCTCGATGTGTGAGATG
TGCCGTGCGTGGAGCCGTCGCAATGCTTTGGGTTCCGGGGAGTGCAAGCT
GGTCTCTGCGGTTGCGTTAGAACACTCTACAGTGAAATTTTTGTTTTTTT
CTCGCGCGGTTTCTGCAAGAAATAGAGGAAGGTCTTATTCAACGACGAAC
GTTTGGGTCGCTGATGTTGCCGAGACTGGCATTAGCAGCCTGGGCAAGAG
TACAATAGGTGACTTGTGCCCCCTCCTACCCTCTCGAAATGGTGATAACC
TGAACGAAAGCGTCCCAGCTCTGAACGCGTGAACGCGAATCGATTTCACT
GCCAATCTGGCTTGGGCGATGCACCCACCGTGTGTACCCACAAACCCGTT
GCTCCCAATTGGACCCCCATGCCAAATTCAGTGCAGCGAACGCACTTCTG
CTCGAGAGGCGCTGCCGGATGCAACGGGCACCCTGCGTGCCGCGTGGCCA
AAGGAGCTGCTCTCTGTCGAGGCTTTGAAGGGGTTCATTGGACCGGGCCA
GTACACACACCTCGGCGTTCAGGTGTGGAACAGGTTGCTAAGGACCTTGT
GAAATGTGTGCTGTGATGTCGACGCTGGCGTGCGACCTCGCCACCCTCGA
TGACAGCCCCCGGCGCACTCGGACCTATCTCTTGGCCTCCGCTATTTGTA
ATCCTCAGCCTGGTGCTGCTTCAAGTAAATTTAACGCGTGTTGCTTCAGT
TTGCGTGCAACGGAGCCGGCCAACCTAGAGGGTGCGTTTTCCTGAAAGCC
TCTGTTACCCCCGTACCGGTAGCTCTGTCGCCTTCGTCGCCGCGAGTGAA
GCGCGACGATTCGCTATTCCCTCTCGGAGCGACCTTAACCTTTTGGAGAC
GGAGTCCCTTTTTGCGCAGAATATCGTTAGTACCGGCACTGTGTAGTGTA
ATACAGTATATCACGGTGACAGATGCACAAGTGCAACCAACCACCGTGGA
TGAAAGCTAAGCGTGTGGCTAGGCTTTTCTTATCGTTCCTACCGCGGCTA
TGGCGAGGCGAAGAAGAGCCCCCCTTCGGTCACCGTTGGATGTGAAATAC
TAATACGTCGCAGGCGCATGACCCCCAACAACATTAACTCGCTTCGGAAA
GGGTTATAACCCGTTCGGCACTGCATCCGTTTTGCCCGGAGTATTGTCAC
TTGCGGGTACATTCAGTGCACGCAACGTGCGTGTGTGTACGTGCTCGCTA
CTCGCGGCAGGGTTACCACTGTGTCCCACCGCCACTACAGCAGTAGTACT
GTGTTCAGCGAGGAGTAGGCAAGCCACCTTTTCGGGTACAGTCCTGTACC
TGTTCGGTGTGAACTACTTCGCAGGCACATGACCCCCAACACCCACTCGG
TTCCTAGAGAGTTAAGCCTTTTGGTACTAGCCCCCTGTTTGGAGCGCCGG
TTAGCACGTAATGAGGCGTGCTTGAAGCGGAGCCCTGGAGAACGGAACCC
ACGGCTTACGGCACAGGGTATATGAGAAAGAAAGGAGCCAAAGGGAACCA
GCCGGGGCTGTCGTAGCTGTCGACTGGCATCGAGAGAGTTTTTGGTCGTT
TCGGAGAGCCCTACTACAGCAGTAATAACAATATATGAACAATATAATAG
TACCAAAAGGGTTAAGAACGTCGCCCTTTTGCTTCCGCTCGCGTGGGCCA
CGGGTTTGGGATCGGCACGGCTTCCTCTCCAGGTCTACAACCAAGATAGC
GTCGTGCAATCGGTCCTGAGCTCCGCCGTCAGCACGGTGATGGGGTCGAA
GGGGAGCCTCCTCGGAGCAGGGAGCTTGGAGGTGTCCCCTCTCCTGTCAG
GAGGGGTGCACCTAATCGACACCTGGGTGGAGCTTGAGGTAAGGACTACC
TGTAGGGGTGGAGCGAGGGCGATGGCGTGTATCGATGCTTCTTGTTGTTG
CCGATAGTTCGATAAATGATCCACACACCTATATTGGTCGGTGACACACG
TAATTTTGTAGGGCGGTGGTGCTTTAGTTCCCTCACACATCTGGTGTGAG
GAAATGTATTTTGTCGCGCGCGCCCAACAGTTGGCTGGGTTACGTGGTCT
ACCACCCCTGTCCGCGATTCGTAAATTAACTACGGTAGTAGGTAACCACG
GCTATGCCCGTGAGGTAAAAAATCCTACTCGATTATTGTCAGCACTTCGC
GCTCAACACAAACATAACACAGACATCTTGTGGGAGTTTACTGTACAAAA
TCGTCCTCAAATCGTTTAGGATTTTAGTGTACAAAATCGGCCTCAAAATC
GCATAGGAAATAGTGTGGAAAAATATTTCAAAGCGGCATTAATTAATCAA
GATGTTGCAACCGCGCGTCCTTTCCCTTTCACCTCCTTCGCTTGCGCGCG
TCCTTTCCCTTTCACCTCCTTCGCTTGGGCGTAAGCCCCGTGTCTGGCGG
GTCGCGCACAGGTCGGGGGGGGGGGGGGGGGAAGGGTTAGGGGAGGGAAT
GGGAAAAGGAGAAAGGGTGGGAAAAGGAGGGTTGACGAACTAAGCGAGTT
TGGACAAGGGGTAGAAGTTAGATCTATTAGANNNNNNNNNNCCCCCTCCC
CCCCCCCGCGGTCGCGGTGGGGGGCCGCGCGGGGGGGGGGGGGGCGGGGG
GGGGGGGGGGGGGGGGGGGGGGGGGCAACGGTTAGCAGAGAGACTGGACA
CAGATGAAATCGTTGGAACAGCAGAGTTGACCACCTAATCGACTTTGGAC
AAGGGTTGACAGTTAGACCTATCAGAAGATGTCTCGACGCTTCGGTTGGT
CGCCGTGGCACGACACGAAGTGCATCGTTTGAGTCCAGCCGATGCGCCCG
AATTTGGCCAGATTTAGCCACACCGACGTTGCTCGTACGCACCCTATATA
CCCACTTGCACACACCCAATGTTATGGGTTCGGGTCGGGGTTAGGGTCGT
TAATATTGGGTTTGGAACGCGTTGTGAACGGAGAAGCAGAACAGCCGAAA
CGCCAACCATGTGTCCATAATAGACGAGGCGGAAAACGTCCCTCTTGGAG
CTGAACACGGGTATGACACGCGACTCACAACTCCATTTTTTCGCCTCTCC
TCCACATGTTTCTTCTTCCGCACTTCGCTCGGCCACCCGCACAAAACCCG
CAAAATCGCTGAAACGCGAAAGCCGAGGGGGCGGGTGCATCTCCACGTCG
ATTACGAGCCCAAGGGCATCGAGCCAGGGCCGAACGACGTTGTCTTTCTG
GAGAGTTTCGCCAGGTGACTGCGGTAACGGGTATGGGCATCATACATTTG
AACCATGGAATCACACTTGAGACAAACCTCCGTGGGCATAGCTTGGACCG
TCCCCCTTCTCTTCAATATCGTTGGACCCCATCGCTCGCTCTGTGGTTTG
AAACCGTTTCGTGCTTCAAGGTATTCGTCGCTCGGCAGCAAACCGGAGCG
GACCAGTTGGTGGCTCGAAGCGCCCCGGCTCCCGTGTTTTGCTAGGCTTG
TTCCTCTTCTTCCGTATTTTGAGGCTTCTTGTTCGGCCCGGCCAGGCTGT
TTGCAGATGGGTTCAGCCTTGTGGGTTGTCTTACGGTTGGACATCAGAGC
GATATAGAGGTGTATTGGTTGGCGAAGCACCCTTCCTGGTACGAGGCGGT
ATGTTGCGTTCATGCTTCCTGCCTCGTTGGTGCCGCCTTGGTGGGAGTCG
CCGGCCACTTTCTGAAATGCTCGTGTTAGAAACCCTTGCTGTCGCGGAAA
GACCCTCGGCAAAAGGCTCACAAGGGTTCGTGGGAAACCCATACACACAA
TATATTTATATTCTTCGTTGGTCGCCTAATTCCGTTAACGGAGCGGCTTC
GTGTGTCGGGTACAATATCATACTTGCAGTTCCCTCCAATGGACGTTTTT
GTTTGTCGGCGTTGAGTATTTTTCCGGGTGTGGACCACACGAACGCTCCG
GCCGCTGAGCCGTGACTCGGTGCGGTGGAGATAGTCTGCTGGTGGCATGG
CTTGATCGAGGCGCCATCTTCTTGAACCGCTAATGCCGTCAATGCTGAAA
GCACGACCCGAAGAACCGACGGATGGCGAATTTTCGTCGTGTTTTTGTTT
TCGCCGATCTGTGACTCCTTGACTGTTTTTGAACCGATAGATTAGAGGAC
AGACAGCTCGGTCGGCATAAGACGTTCGATGCCCGAGAAAATCGGCAATC
GATTATTGGTCAGGCACTCGACAAAACATTTACCGTGCACAGCATCTGCT
TTTGCGCGTCGCCGGCCGTGTCCAGGTGGGAAGACAGCTTAGTGCTTCCC
CCCGGTGCCCCTATGGTGGTCCTGTCCATGTGCCGCCCCTTCCTGCTTGT
GGCGTTCGACACGTTCACCGGGCGCGAGGGGCGACTGCGCCTGCATCGCA
ACTGCGTGTCGGTCGTGGAGAGACTCACCTGGCTCGACGTGACGCTGGCC
ACTCTTGCCAGGTGAGCGTCGGGGTCAACACAGGGTCGTTGTTGTATCGC
AAATGCTTCTCTTGTGGAAACCCAAGGCTTTATTCTCCCGGTGGCGTAGT
AATAGGGTGCCTTACAGTCGCGTGTTGACCTGGAAGTCGAGGTATTGACC
GTGCGTCCGGCAGGAGCAGCGTAGGAGAAAAACGCCGCTGTTTGCCTCCG
CGCGCGGGAACAAGGGCACGCTTTTGGCTCGGTTAAGGACATGAGCAAGT
GGAACCCACGCAGAACGATTGCGGCTGGGAATCGCGTAAACGTGTGGAGA
TCTGGCCCTTGTTGGCGCCGTCGCGGGGCAAGGTCTTTACGACCGGACGA
CTCTGTTGACCATTCTCCCGGCTCCTCTCGGTTGGACGACCACCATCACC
AAAATGTCTCACTTGAGTGTTCGGCAGCGCCATGTAGGTGGAGAAGTATC
ACGGGCTCGCTCATAATATGTTTATCAAACGGCCAATCTCACCTTGATGT
GCTGCCCATAAACCCCCCCGCCCCCCGGCCTCCCACCGCGTTGAACCATC
CCCCCCGCTCCTTTCTCGGGCGCAGGCCCGTTGACGCTATGCTGAGGACG
GACACGGGCAGCTGGGTCGTGAGGAAGTCTCGTCCTTTGGTGCATCCCTT
GATCGTCATGGCGGCGCCTCTGCAGGCCTCTCTGCTTGTGGCCTTCTCGG
CCCTTAAGGTAGCGATAAGAGGCGCGATCATGGGCACCCAGGCGGTGTAC
CACGAGTCTGTAGCGAATAATTAGGAGTGGGGTGTGCGCGCGCGCCGTGC
GTTTTGCGCGGGTGAAGATGCCGTACGTCTGGAGCAAGTGCGCTCTGTTT
TCTGTGCTTGTATGTTTTTGCTCCAGGTGGTTTTTGAGGAGATATTCTTC
GTGTGTGTGATATCGCGATGAGTTGTGTTTATTTTGAAGTTTTTGTTCCG
TGCCGTCGTCCTGCGTTGTATACTGTTGCATGGGCCTGGCGTTACGAGCC
GTGTGTTTTGTGCGTGTGTACCTAGCCCTTTTGCCGAGCACAGAGAATGA
GGAAAGGGGTCTCAGGTTGTTTGTTACAAGAGGTACTTGCAAATCCATCC
CGCAGACAAGTGTTGCCTGCAGATTGTATTCGTGCTCCAGGAGGTTTCGA
AGTCGCCGTAAAATGGCGCGTGCATCCAGGTGGCATCGTAGACGGCGTGG
AGTCACTCGCGCGCTTGGGTTTATAGTGTTCAAAACGCCTACTGCGATCT
ACGCCTCGTCGGAAAAGGGCCCTGTGGCAGGAGCTTTTGTTGCTCAGAGA
GGTTTACTCTATTGGGTCGTGTATGTGTAGTCTGTTGCCACAACCAACAA
GTGCTCGCCGTTCTATCCTGCGTATCGTCGAACAAGGAAAACGTATGCAT
CTTGAGAGCCACGCTTCAAACGCTGTGTATCGCCTCTTACCACGTATGAG
TGGCGACACGAACGGGACATTTTCTACCAAGGTGGCTGCTTTTGTGCGCA
CAACGCCTCATACACACAAGTTTGTTCGATTAGAGTCCCCACCCC back to topCoding sequence (CDS) from alignment at S-dermatodea_contig8439:1648..9192- >mRNA_S-dermatodea_contig8439.16609.1 ID=mRNA_S-dermatodea_contig8439.16609.1|Name=mRNA_S-dermatodea_contig8439.16609.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=1824bp|location=Sequence derived from alignment at S-dermatodea_contig8439:1648..9192- (Saccorhiza dermatodea SderLu1190fm monoicous)
ATGGGCCATTTTCAGATGGGCCATTTTCAGCAGGTTCGCGTGGTCGCCGC
CTCGGAGATATCGGAACCAGACTGGTCGCGTCTGGCAACCCTGAATAAGA
TTGGCGGCGGGGATGACGTATCGCTTCCTTACGTCACCGTGTCGCTGGGG
CAGCAGGTTCGCGTGGTCGCCGCCTCGGAGATATCGGAACCAGACTGGTC
GCGTCTGGCAACCCTGAATAAGATTGGCGGCGGGGATGACGTATCGCTTC
CTTACGTCACCGTGTCGCTGGGGCAGTGCAGCGAACGCACTTCTGCTCGA
GAGGCGCTGCCGGATGCAACGGGCACCCTGCGTGCCGCGTGGCCAAAGGA
GCTGCTCTCTGTCGAGGCTTTGAAGGGGTTCATTGGACCGGGCCAGTACA
CACACCTCGGCGTTCAGTGCAGCGAACGCACTTCTGCTCGAGAGGCGCTG
CCGGATGCAACGGGCACCCTGCGTGCCGCGTGGCCAAAGGAGCTGCTCTC
TGTCGAGGCTTTGAAGGGGTTCATTGGACCGGGCCAGTACACACACCTCG
GCGTTCAGGTCTACAACCAAGATAGCGTCGTGCAATCGGTCCTGAGCTCC
GCCGTCAGCACGGTGATGGGGTCGAAGGGGAGCCTCCTCGGAGCAGGGAG
CTTGGAGGTGTCCCCTCTCCTGTCAGGAGGGGTGCACCTAATCGACACCT
GGGTGGAGCTTGAGGTCTACAACCAAGATAGCGTCGTGCAATCGGTCCTG
AGCTCCGCCGTCAGCACGGTGATGGGGTCGAAGGGGAGCCTCCTCGGAGC
AGGGAGCTTGGAGGTGTCCCCTCTCCTGTCAGGAGGGGTGCACCTAATCG
ACACCTGGGTGGAGCTTGAGCCGAGGGGGCGGGTGCATCTCCACGTCGAT
TACGAGCCCAAGGGCATCGAGCCAGGGCCGAACGACGTTGTCTTTCTGGA
GAGTTTCGCCAGCCGAGGGGGCGGGTGCATCTCCACGTCGATTACGAGCC
CAAGGGCATCGAGCCAGGGCCGAACGACGTTGTCTTTCTGGAGAGTTTCG
CCAGGTGGGAAGACAGCTTAGTGCTTCCCCCCGGTGCCCCTATGGTGGTC
CTGTCCATGTGCCGCCCCTTCCTGCTTGTGGCGTTCGACACGTTCACCGG
GCGCGAGGGGCGACTGCGCCTGCATCGCAACTGCGTGTCGGTCGTGGAGA
GACTCACCTGGCTCGACGTGACGCTGGCCACTCTTGCCAGGTGGGAAGAC
AGCTTAGTGCTTCCCCCCGGTGCCCCTATGGTGGTCCTGTCCATGTGCCG
CCCCTTCCTGCTTGTGGCGTTCGACACGTTCACCGGGCGCGAGGGGCGAC
TGCGCCTGCATCGCAACTGCGTGTCGGTCGTGGAGAGACTCACCTGGCTC
GACGTGACGCTGGCCACTCTTGCCAGGCCCGTTGACGCTATGCTGAGGAC
GGACACGGGCAGCTGGGTCGTGAGGAAGTCTCGTCCTTTGGTGCATCCCT
TGATCGTCATGGCGGCGCCTCTGCAGGCCTCTCTGCTTGTGGCCTTCTCG
GCCCTTAAGGTAGCGATAAGAGGCGCGATCATGGGCACCCAGGCGGTGTA
CCACGAGTCTGTAGCGAATAATTAGGCCCGTTGACGCTATGCTGAGGACG
GACACGGGCAGCTGGGTCGTGAGGAAGTCTCGTCCTTTGGTGCATCCCTT
GATCGTCATGGCGGCGCCTCTGCAGGCCTCTCTGCTTGTGGCCTTCTCGG
CCCTTAAGGTAGCGATAAGAGGCGCGATCATGGGCACCCAGGCGGTGTAC
CACGAGTCTGTAGCGAATAATTAG back to top
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