prot_S-dermatodea_contig84370.16606.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig84370.16606.1
Unique Nameprot_S-dermatodea_contig84370.16606.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length56
Homology
BLAST of mRNA_S-dermatodea_contig84370.16606.1 vs. uniprot
Match: A0A6H5KZB6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZB6_9PHAE)

HSP 1 Score: 112 bits (281), Expect = 1.100e-27
Identity = 53/56 (94.64%), Postives = 53/56 (94.64%), Query Frame = 0
Query:    1 MATRDWRIFMEDFDIRVKGGKAPLPLRFWEEGNLPSSVMEAIRELGYETPSPIQRQ 56
            MA RDWRIF EDFDIRVKGGKAPLPLRFWEEGNLPSSVMEAIRELGYE PSPIQRQ
Sbjct:  567 MAERDWRIFREDFDIRVKGGKAPLPLRFWEEGNLPSSVMEAIRELGYEKPSPIQRQ 622          
BLAST of mRNA_S-dermatodea_contig84370.16606.1 vs. uniprot
Match: D8LDQ4_ECTSI (DEAD box helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDQ4_ECTSI)

HSP 1 Score: 110 bits (276), Expect = 5.200e-27
Identity = 52/56 (92.86%), Postives = 53/56 (94.64%), Query Frame = 0
Query:    1 MATRDWRIFMEDFDIRVKGGKAPLPLRFWEEGNLPSSVMEAIRELGYETPSPIQRQ 56
            MA RDWRIF EDFDIRVKGGKAPLPLRFWEEG+LPSSVMEAIRELGYE PSPIQRQ
Sbjct:  550 MAERDWRIFREDFDIRVKGGKAPLPLRFWEEGHLPSSVMEAIRELGYEKPSPIQRQ 605          
BLAST of mRNA_S-dermatodea_contig84370.16606.1 vs. uniprot
Match: A0A835YKD8_9STRA (Putative DEAD box helicase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKD8_9STRA)

HSP 1 Score: 97.8 bits (242), Expect = 2.050e-22
Identity = 45/56 (80.36%), Postives = 49/56 (87.50%), Query Frame = 0
Query:    1 MATRDWRIFMEDFDIRVKGGKAPLPLRFWEEGNLPSSVMEAIRELGYETPSPIQRQ 56
            MA RDWRIF EDFDIRVKGGKAPLPLR WEEG L +++MEAI ELGY+ PSPIQRQ
Sbjct:  353 MAERDWRIFREDFDIRVKGGKAPLPLRNWEEGKLAATIMEAIEELGYKEPSPIQRQ 408          
BLAST of mRNA_S-dermatodea_contig84370.16606.1 vs. uniprot
Match: A0A7S3US55_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3US55_HETAK)

HSP 1 Score: 95.1 bits (235), Expect = 1.490e-21
Identity = 42/56 (75.00%), Postives = 49/56 (87.50%), Query Frame = 0
Query:    1 MATRDWRIFMEDFDIRVKGGKAPLPLRFWEEGNLPSSVMEAIRELGYETPSPIQRQ 56
            M  RDWRI  ED+DIRVKGG+APLPLR WEEGN+P+ VM+AI+ELG+E PSPIQRQ
Sbjct:   28 MQPRDWRILREDYDIRVKGGRAPLPLRKWEEGNIPAPVMDAIKELGFEKPSPIQRQ 83          
BLAST of mRNA_S-dermatodea_contig84370.16606.1 vs. uniprot
Match: A0A812VH24_SYMMI (RH21 protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812VH24_SYMMI)

HSP 1 Score: 87.4 bits (215), Expect = 7.910e-19
Identity = 39/56 (69.64%), Postives = 44/56 (78.57%), Query Frame = 0
Query:    1 MATRDWRIFMEDFDIRVKGGKAPLPLRFWEEGNLPSSVMEAIRELGYETPSPIQRQ 56
            M  RDWRIF EDFDIR++GG+A LPLR WEE   PS VM AI+ +GYE PSPIQRQ
Sbjct:    1 MTERDWRIFREDFDIRIQGGRATLPLRNWEEAQFPSPVMRAIQSMGYEKPSPIQRQ 56          
BLAST of mRNA_S-dermatodea_contig84370.16606.1 vs. uniprot
Match: A0A7S3H980_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H980_9STRA)

HSP 1 Score: 87.0 bits (214), Expect = 1.260e-18
Identity = 38/56 (67.86%), Postives = 44/56 (78.57%), Query Frame = 0
Query:    1 MATRDWRIFMEDFDIRVKGGKAPLPLRFWEEGNLPSSVMEAIRELGYETPSPIQRQ 56
            M  RDWRIF EDFDIR++GG+A LPLRFW E N P +V++AI   GYE PSPIQRQ
Sbjct:  239 MTERDWRIFREDFDIRIQGGRATLPLRFWNEANFPPAVVKAIEAAGYEKPSPIQRQ 294          
BLAST of mRNA_S-dermatodea_contig84370.16606.1 vs. uniprot
Match: A0A5S6QMI8_TRIMR (RNA helicase n=2 Tax=Trichuris TaxID=36086 RepID=A0A5S6QMI8_TRIMR)

HSP 1 Score: 84.7 bits (208), Expect = 8.150e-18
Identity = 35/56 (62.50%), Postives = 44/56 (78.57%), Query Frame = 0
Query:    1 MATRDWRIFMEDFDIRVKGGKAPLPLRFWEEGNLPSSVMEAIRELGYETPSPIQRQ 56
            MA RDWRIF ED++I +KGG  P PLR WE+GN P  V++ IR++GYE P+PIQRQ
Sbjct:  277 MAERDWRIFREDYNISIKGGNVPKPLRSWEDGNFPQEVLDVIRKVGYEEPTPIQRQ 332          
BLAST of mRNA_S-dermatodea_contig84370.16606.1 vs. uniprot
Match: A0A0N4THZ0_BRUPA (RNA helicase n=1 Tax=Brugia pahangi TaxID=6280 RepID=A0A0N4THZ0_BRUPA)

HSP 1 Score: 79.0 bits (193), Expect = 9.320e-18
Identity = 33/56 (58.93%), Postives = 42/56 (75.00%), Query Frame = 0
Query:    1 MATRDWRIFMEDFDIRVKGGKAPLPLRFWEEGNLPSSVMEAIRELGYETPSPIQRQ 56
            M  RDWRIF EDF+I +KGG+ P PLR WEE  LP+ V + I ++GY+ P+PIQRQ
Sbjct:    1 MTERDWRIFREDFNISIKGGRVPKPLRNWEEAGLPAEVFDVIMKIGYKEPTPIQRQ 56          
BLAST of mRNA_S-dermatodea_contig84370.16606.1 vs. uniprot
Match: F0Y5I0_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y5I0_AURAN)

HSP 1 Score: 84.0 bits (206), Expect = 1.510e-17
Identity = 37/56 (66.07%), Postives = 44/56 (78.57%), Query Frame = 0
Query:    1 MATRDWRIFMEDFDIRVKGGKAPLPLRFWEEGNLPSSVMEAIRELGYETPSPIQRQ 56
            M  RDWRI  EDFDIR++GGKAPLPLRFW E +L   ++ AIR+ GY+ PSPIQRQ
Sbjct:  150 MTDRDWRIMKEDFDIRIRGGKAPLPLRFWGEADLGEPLLMAIRDAGYKEPSPIQRQ 205          
BLAST of mRNA_S-dermatodea_contig84370.16606.1 vs. uniprot
Match: A0A183HXU1_9BILA (RNA helicase n=1 Tax=Onchocerca flexuosa TaxID=387005 RepID=A0A183HXU1_9BILA)

HSP 1 Score: 80.1 bits (196), Expect = 2.140e-17
Identity = 34/56 (60.71%), Postives = 42/56 (75.00%), Query Frame = 0
Query:    1 MATRDWRIFMEDFDIRVKGGKAPLPLRFWEEGNLPSSVMEAIRELGYETPSPIQRQ 56
            M  RDWRIF EDF+I +KGG+ P PLR WEE  LPS V + I ++GY+ P+PIQRQ
Sbjct:   79 MTERDWRIFREDFNISIKGGRVPKPLRNWEEAGLPSEVFDVIMKIGYKEPTPIQRQ 134          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig84370.16606.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KZB6_9PHAE1.100e-2794.64Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LDQ4_ECTSI5.200e-2792.86DEAD box helicase n=1 Tax=Ectocarpus siliculosus T... [more]
A0A835YKD8_9STRA2.050e-2280.36Putative DEAD box helicase n=1 Tax=Tribonema minus... [more]
A0A7S3US55_HETAK1.490e-2175.00Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A812VH24_SYMMI7.910e-1969.64RH21 protein n=1 Tax=Symbiodinium microadriaticum ... [more]
A0A7S3H980_9STRA1.260e-1867.86Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A5S6QMI8_TRIMR8.150e-1862.50RNA helicase n=2 Tax=Trichuris TaxID=36086 RepID=A... [more]
A0A0N4THZ0_BRUPA9.320e-1858.93RNA helicase n=1 Tax=Brugia pahangi TaxID=6280 Rep... [more]
F0Y5I0_AURAN1.510e-1766.07Uncharacterized protein (Fragment) n=1 Tax=Aureoco... [more]
A0A183HXU1_9BILA2.140e-1760.71RNA helicase n=1 Tax=Onchocerca flexuosa TaxID=387... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.300coord: 1..56
e-value: 1.5E-8
score: 35.9
IPR014014RNA helicase, DEAD-box type, Q motifPROSITEPS51195Q_MOTIFcoord: 27..55
score: 11.456

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig84370contigS-dermatodea_contig84370:393..560 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig84370.16606.1mRNA_S-dermatodea_contig84370.16606.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig84370 366..560 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig84370.16606.1 ID=prot_S-dermatodea_contig84370.16606.1|Name=mRNA_S-dermatodea_contig84370.16606.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=56bp
MATRDWRIFMEDFDIRVKGGKAPLPLRFWEEGNLPSSVMEAIRELGYETP
SPIQRQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR014014RNA_helicase_DEAD_Q_motif