prot_S-dermatodea_contig8433.16603.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig8433.16603.1
Unique Nameprot_S-dermatodea_contig8433.16603.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length178
Homology
BLAST of mRNA_S-dermatodea_contig8433.16603.1 vs. uniprot
Match: A0A6H5KQY7_9PHAE (EF-hand domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQY7_9PHAE)

HSP 1 Score: 178 bits (452), Expect = 1.030e-48
Identity = 102/156 (65.38%), Postives = 113/156 (72.44%), Query Frame = 0
Query:    1 MDEPTAVVGD--IVLSDWLDE--LPLASLNLPDLGEEGGEGVGIQGQVEVIKGQREHDDDAEVAGDSAPFRFQQLIQNMWAGLSRGDQLSYLGADGQARVKGALTVLAAYGALREHPLQAGVNSPQQAFSEMDFNRDGEVSFDEFARWYSMSSALD 152
            ++ PT  V D  +VLSDWLDE   PL    LP LG    E    QG VEV+  Q   DD+  V   SAPFRFQQLIQ MWA LSRG QL YLG +G+A+VK AL+VLAAY ALREHPLQ GV +PQQAFSEMDFNRDGEVSFDEF RWYSMS+ALD
Sbjct:  132 VEVPTGGVKDSVVVLSDWLDESQAPLGLAGLPGLGNR--EEHLNQGLVEVVGSQAGGDDEDGVGDGSAPFRFQQLIQQMWATLSRGHQLEYLGNEGKAKVKQALSVLAAYSALREHPLQTGVENPQQAFSEMDFNRDGEVSFDEFVRWYSMSTALD 285          
BLAST of mRNA_S-dermatodea_contig8433.16603.1 vs. uniprot
Match: D7G573_ECTSI (GTP diphosphokinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G573_ECTSI)

HSP 1 Score: 177 bits (449), Expect = 2.690e-48
Identity = 107/176 (60.80%), Postives = 123/176 (69.89%), Query Frame = 0
Query:    1 MDEPTAVVGD--IVLSDWLDELPLASLNLPDLGEEGGEGVGI-QGQVEVIKGQREHDDDAEVAGDSAPFRFQQLIQNMWAGLSRGDQLSYLGADGQARVKGALTVLAAYGALREHPLQAGVNSPQQAFSEMDFNRDGEVSFDEFARWYSMSSALDGQ-QRPXXXXXAGTTTANSGN 172
            ++ PT  V D  +VLSDWLDE   ASL LP L   G     + QG VEV+  Q   DD+  V   SAPFRFQQLIQ MWA LSRG+QL YLG +G+A+VK AL+VLAAY ALREHPLQ GV +PQQAFSEMDFN DGEVSFDEF RWYSMS+ALD + Q+       G  +A SGN
Sbjct:   59 VEGPTDDVEDSVVVLSDWLDESQ-ASLGLPGLPGLGNREEHLNQGLVEVVGSQANGDDEDGVGDGSAPFRFQQLIQQMWATLSRGNQLEYLGKEGKAKVKQALSVLAAYSALREHPLQTGVENPQQAFSEMDFNSDGEVSFDEFVRWYSMSTALDEKPQQLPEQANVGPASARSGN 233          
BLAST of mRNA_S-dermatodea_contig8433.16603.1 vs. uniprot
Match: A0A835YJV9_9STRA (EF-hand domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJV9_9STRA)

HSP 1 Score: 108 bits (269), Expect = 5.030e-24
Identity = 59/103 (57.28%), Postives = 73/103 (70.87%), Query Frame = 0
Query:   51 REHDDDAEVAG----DSAPFRFQQLIQNMWAGLSRGDQLSYLGADGQARVKGALTVLAAYGALREHPLQAGVNSPQQAFSEMDFNRDGEVSFDEFARWYSMSS 149
            RE   DA  AG     SAPFRFQ+LI  MW  L +G  L YLG++GQARVK A+ VLAA  ALREHP + GV SP++ F+EMDF+ +GEV+F+EF RWY  S+
Sbjct:   91 REGGVDARGAGAYDLSSAPFRFQRLISAMWRELRKGGALEYLGSEGQARVKRAMIVLAAMAALREHPRRDGVLSPKKIFAEMDFDSNGEVTFEEFVRWYEGSA 193          
BLAST of mRNA_S-dermatodea_contig8433.16603.1 vs. uniprot
Match: A0A7S4DFJ0_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DFJ0_HETAK)

HSP 1 Score: 75.5 bits (184), Expect = 1.390e-13
Identity = 52/148 (35.14%), Postives = 75/148 (50.68%), Query Frame = 0
Query:    3 EPTAVVGDIVLSDWLDELPLASLNLPDLGEEGGEGVGIQGQVEVIKGQREHDDDAEVAGDSAPFRFQQLIQNMWAGLSRGDQLSYLGADGQARVKGALTVLAAYGALREHPLQAGVNS--PQQAFSEMDFNRDGEVSFDEFARWYSMS 148
            EP  VV   VL+DWLDE    S  LP                    G   + D+ ++A    P +F++++++MW  L+   +L YL    QA +K AL V+ A+ +L EHP      S  P QA+ E D N DG+++F+EF RWY  S
Sbjct:   71 EPEQVV---VLTDWLDEDDADSQELPSSSS--------------ALGFARYQDENDLA--DVPQKFKRMVKDMWEELTSEGELDYLSEAEQALIKKALAVITAFSSLNEHPAYTYGTSRNPFQAYQEADANGDGDLTFEEFDRWYRAS 199          
BLAST of mRNA_S-dermatodea_contig8433.16603.1 vs. uniprot
Match: A0A4D9D784_9STRA (EF-hand domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D784_9STRA)

HSP 1 Score: 73.9 bits (180), Expect = 3.930e-12
Identity = 40/97 (41.24%), Postives = 57/97 (58.76%), Query Frame = 0
Query:   53 HDDDAEVAGDSAPFRFQQLIQNMWAGLSRGDQLSYLGADGQARVKGALTVLAAYGALREHPLQA-GVNSPQQAFSEMDFNRDGEVSFDEFARWYSMS 148
            HDD    A    P R Q+ +  +W  + RGD+++YL A+ + RVK  L VLA +  L +HP Q     S +  F + D NRDG++SF+EF RWY+ S
Sbjct:  157 HDDGQ--AAQQLPVRLQREVNLVWYEIQRGDRMAYLRAEERERVKQQLVVLAFFRTLFDHPSQVLNTQSAEACFQQADVNRDGQLSFEEFLRWYTAS 251          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig8433.16603.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A6H5KQY7_9PHAE1.030e-4865.38EF-hand domain-containing protein n=1 Tax=Ectocarp... [more]
D7G573_ECTSI2.690e-4860.80GTP diphosphokinase n=1 Tax=Ectocarpus siliculosus... [more]
A0A835YJV9_9STRA5.030e-2457.28EF-hand domain-containing protein n=1 Tax=Tribonem... [more]
A0A7S4DFJ0_HETAK1.390e-1335.14Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A4D9D784_9STRA3.930e-1241.24EF-hand domain-containing protein n=2 Tax=Monodops... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002048EF-hand domainSMARTSM00054efh_1coord: 120..148
e-value: 0.0057
score: 25.9
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 122..151
score: 10.72
NoneNo IPR availableGENE3D1.10.238.10coord: 90..156
e-value: 3.9E-6
score: 28.5
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 129..141
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 121..147

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig8433contigS-dermatodea_contig8433:5649..8176 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig8433.16603.1mRNA_S-dermatodea_contig8433.16603.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig8433 5649..8176 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig8433.16603.1 ID=prot_S-dermatodea_contig8433.16603.1|Name=mRNA_S-dermatodea_contig8433.16603.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=178bp
MDEPTAVVGDIVLSDWLDELPLASLNLPDLGEEGGEGVGIQGQVEVIKGQ
REHDDDAEVAGDSAPFRFQQLIQNMWAGLSRGDQLSYLGADGQARVKGAL
TVLAAYGALREHPLQAGVNSPQQAFSEMDFNRDGEVSFDEFARWYSMSSA
LDGQQRPPPPQSAGTTTANSGNVTPTSS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002048EF_hand_dom
IPR018247EF_Hand_1_Ca_BS
IPR011992EF-hand-dom_pair