prot_S-dermatodea_contig84316.16600.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig84316.16600.1
Unique Nameprot_S-dermatodea_contig84316.16600.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length76
Homology
[Close]
BLAST of mRNA_S-dermatodea_contig84316.16600.1 vs. uniprot
Match: D8LC50_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC50_ECTSI)

HSP 1 Score: 64.7 bits (156), Expect = 2.240e-11
Identity = 43/77 (55.84%), Postives = 49/77 (63.64%), Query Frame = 0 
Query:    1 DELSALQTTLIIPRARRSAAIASQRRTASEIGKLVGKAFDDEDD--SDEDADLGGSFATPAAGLAEGESDEEAELDF 75
            DELSAL+  +I PRARR AAIASQRRTASEIGK VG A D++D   SDED +L                 EEAEL+F
Sbjct:   73 DELSALKGNIIYPRARRKAAIASQRRTASEIGKFVGGAADEDDXXXSDEDGELXXXXXXXXXXXXXXXXXEEAELEF 149
[Close]
BLAST of mRNA_S-dermatodea_contig84316.16600.1 vs. uniprot
Match: A0A6H5J8X7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J8X7_9PHAE)

HSP 1 Score: 66.2 bits (160), Expect = 2.480e-11
Identity = 44/77 (57.14%), Postives = 49/77 (63.64%), Query Frame = 0 
Query:    1 DELSALQTTLIIPRARRSAAIASQRRTASEIGKLVGKAFDDEDD--SDEDADLGGSFATPAAGLAEGESDEEAELDF 75
            DELSAL+  +I PRARR AAIASQRRTASEIGK VG A DD+    SDED +LGG                EAEL+F
Sbjct:  165 DELSALKGNVIYPRARRKAAIASQRRTASEIGKFVGGAADDDXXXXSDEDGELGGXXXXXXXXXXXXXXXXEAELEF 241
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig84316.16600.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LC50_ECTSI2.240e-1155.84Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5J8X7_9PHAE2.480e-1157.14Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig84316contigS-dermatodea_contig84316:362..589 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig84316.16600.1mRNA_S-dermatodea_contig84316.16600.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig84316 362..589 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig84316.16600.1 ID=prot_S-dermatodea_contig84316.16600.1|Name=mRNA_S-dermatodea_contig84316.16600.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=76bp
DELSALQTTLIIPRARRSAAIASQRRTASEIGKLVGKAFDDEDDSDEDAD
LGGSFATPAAGLAEGESDEEAELDF*
back to top