prot_S-dermatodea_contig84302.16599.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig84302.16599.1
Unique Nameprot_S-dermatodea_contig84302.16599.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length52
Homology
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BLAST of mRNA_S-dermatodea_contig84302.16599.1 vs. uniprot
Match: A0A6H5KBR4_9PHAE (Protein CASP (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBR4_9PHAE)

HSP 1 Score: 65.5 bits (158), Expect = 4.100e-11
Identity = 36/42 (85.71%), Postives = 39/42 (92.86%), Query Frame = 0 
Query:   11 ERRKIRNRMSAQQHRERQRQRVDTLEDCLRQREGEIANLKEQ 52
            ERRKIRNRMSAQQHRERQRQRVDTLEDCLR R+ EIA L++Q
Sbjct:  232 ERRKIRNRMSAQQHRERQRQRVDTLEDCLRLRDNEIAKLEKQ 273
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BLAST of mRNA_S-dermatodea_contig84302.16599.1 vs. uniprot
Match: D7FWU5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWU5_ECTSI)

HSP 1 Score: 53.9 bits (128), Expect = 4.860e-7
Identity = 28/34 (82.35%), Postives = 31/34 (91.18%), Query Frame = 0 
Query:   19 MSAQQHRERQRQRVDTLEDCLRQREGEIANLKEQ 52
            MSAQQHRERQRQRVDTLEDCLR R+ EIA L++Q
Sbjct:    1 MSAQQHRERQRQRVDTLEDCLRLRDNEIARLEKQ 34
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig84302.16599.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KBR4_9PHAE4.100e-1185.71Protein CASP (Fragment) n=1 Tax=Ectocarpus sp. CCA... [more]
D7FWU5_ECTSI4.860e-782.35Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 32..52
NoneNo IPR availableCOILSCoilCoilcoord: 5..25
NoneNo IPR availableGENE3D1.20.5.170coord: 9..52
e-value: 6.3E-7
score: 31.3
NoneNo IPR availableSUPERFAMILY57959Leucine zipper domaincoord: 9..51
IPR004827Basic-leucine zipper domainPFAMPF07716bZIP_2coord: 9..52
e-value: 2.7E-5
score: 24.1
IPR004827Basic-leucine zipper domainPROSITEPS00036BZIP_BASICcoord: 12..27
IPR004827Basic-leucine zipper domainPROSITEPS50217BZIPcoord: 7..52
score: 9.151

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig84302contigS-dermatodea_contig84302:37..192 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig84302.16599.1mRNA_S-dermatodea_contig84302.16599.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig84302 37..192 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig84302.16599.1 ID=prot_S-dermatodea_contig84302.16599.1|Name=mRNA_S-dermatodea_contig84302.16599.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=52bp
MNQPIKSTKQERRKIRNRMSAQQHRERQRQRVDTLEDCLRQREGEIANLK
EQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004827bZIP