mRNA_S-dermatodea_contig8428.16596.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-dermatodea_contig8428.16596.1
Unique NamemRNA_S-dermatodea_contig8428.16596.1
TypemRNA
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Homology
[Close]
BLAST of mRNA_S-dermatodea_contig8428.16596.1 vs. uniprot
Match: A0A6H5JW11_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JW11_9PHAE)

HSP 1 Score: 559 bits (1441), Expect = 1.490e-187
Identity = 383/781 (49.04%), Postives = 442/781 (56.59%), Query Frame = 1 
Query:    4 DASACVPRMVPWRDWDEWYKVKALLFSPDPSLRCQGVQHVAVWRSRERVPHAVEATSQLVEVRLNDVGPAGCGVAC---PRRSEEELRLIYSTVVIRAINGLTGSEQKTAFAAPVSSLARTIGLPIWLVDIRHEAAHKQASGSLPGIVVLRLAADFLMDYLWRRYWGPQAEHLAFLWSAFDQLISRWGATTQRAPASPAGSASSDRAAADIVSGGSSCSGSRSRSPPDTA---------------DSVANSASGPHGVNAAAAS--AAATSAIAAHEIAFSVTPTALSWALVSLMADGGMGAGGGDGSRVVGA------REQGHLLPRSRDTYPTPESPGVDDHEVARKITCRWAPLLDIFHARWRGFGAALLVRLVEALLDNAVRAQEFAPSGDAGPAVRVSRGG----GGGSRA------------GLKRQAAFIALWVRHLLSRRWHLRGGDARIIQALRKLAVDSGLSPAFCKKQEGSWREEERAWADGP--APPAVLRVAFFPVRELLGRCSRSLLTL-AVRQTSA----------------------PADTSSRDDISPDETADCSGNSETSTAHWAKAGLDAVCHALDAALPGKETAGSHREDMVGGGRANLR--CGRRASSCSRAGVPPPPEGLAADASTP---SPGVGCGGKRSRRRYPPAEESGECEEVEGSGAVDAGVGLGE--API-AMMNLQALERLLGAEGPPD-PCPG---AVPLA-SVGLSKLKTDATSGVLDEVSEDCG-AWELVEGWTPCAIGTLPGWSGARL 2103
            DA   +PRM+PWRDWDEWY+VKALLFSP+P LR QGVQHVAVW+SRER+PHAVE TSQLVEVRLND G AG G       +RSEEELRLIYS VV+RA+NGLTG EQK A AAPVSSLAR IGLP W+VDIRHEAAHKQ    LPGIV LRLAADFL+DYLWRR+W PQAEHL F+W AFDQLI R+ AT+      P  S+                 G  S   P T                D  +     P G  ++AAS   AA   +AAHEI  S TPTALSWA+VSL+ADGG   G   G   VG       R QGHLLPRSRD YPTP         V       WA LLD+FH+RWRGFGAALLVRLVEALLDNA        S   G AV     G    GGG+              GL+RQAAFI +WV HLLSRRWHLR  DAR+ +ALR+ AV +GLSP F + +E  W E E  WAD P  +P +VL  A+FPV ELL RC R+L  L A RQ SA                      P   S+ D I+ DE     G +   +AHWA+AGLDAVCHAL AALPG+  A         G  A+ +  C   A+      V      ++A+   P    P   C    ++   PP E    C    G+   DA  G     AP+ AMM L  LERLLG +       PG   +VP + + G  +       G   EV+ D G AWELVE WTPCAIGTLPG S ARL
Sbjct:    8 DAGQYIPRMIPWRDWDEWYRVKALLFSPEPYLRSQGVQHVAVWQSRERIPHAVETTSQLVEVRLNDAGAAGRGGLTFHGGQRSEEELRLIYSAVVVRAVNGLTGHEQKAAHAAPVSSLAREIGLPTWIVDIRHEAAHKQ----LPGIVTLRLAADFLVDYLWRRHWSPQAEHLGFVWGAFDQLICRYKATSDSDALMPRSSSPGHA-------------GRPSSKKPRTXXXXXXXXXXXXXXXXDXXSKPPGTPRGTGSSAASKFGAAAMEVAAHEIVLSATPTALSWAVVSLLADGG---GRVRGEYFVGGVGGTKGRGQGHLLPRSRDKYPTP---------VRGLGGGWWATLLDMFHSRWRGFGAALLVRLVEALLDNA--------SSTPGAAVNADENGRSACGGGNXXXXXXXXXXXXXXGLERQAAFIEIWVNHLLSRRWHLRTSDARVREALREEAVRAGLSPTFFQAKEALWEENESTWADKPGESPVSVLHAAYFPVHELLDRCRRALSALPAARQPSAANPRTPGDGSLVGKSERSTCPAPPSPSTADGIADDE-----GKNIGYSAHWARAGLDAVCHALAAALPGENAASPSASAATFGLDAHRKGECDNAAAGAPSGPVVATQVAISANQEVPLCVPPTEEC----NQTAGPPGEVLNHCSSG-GAERGDAAKGPASETAPLLAMMGLDDLERLLGGDASSSLAAPGGYTSVPSSIAAGAVRESGFREVGRPSEVNGDTGRAWELVEAWTPCAIGTLPGSSAARL 741
[Close]
BLAST of mRNA_S-dermatodea_contig8428.16596.1 vs. uniprot
Match: D7FGU4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FGU4_ECTSI)

HSP 1 Score: 361 bits (927), Expect = 4.120e-116
Identity = 207/343 (60.35%), Postives = 235/343 (68.51%), Query Frame = 1 
Query:   28 MVPWRDWDEWYKVKALLFSPDPSLRCQGVQHVAVWRSRERVPHAVEATSQLVEVRLNDVGPA-GCGVACP--RRSEEELRLIYSTVVIRAINGLTGSEQKTAFAAPVSSLARTIGLPIWLVDIRHEAAHKQASGSLPGIVVLRLAADFLMDYLWRRYWGPQAEHLAFLWSAFDQLISRWGATTQRAPASPAGSASSDRAAADIVSGGSSC------------SGSRSRSPPDTADSVANSASGPHGVNAAAAS--AAATSAIAAHEIAFSVTPTALSWALVSLMADGGMGAGGGD---GSRVVGAREQGHLLPRSRDTYPTPESPGVDDHEVARKITCRWAPL 996
            M+PWRDWDEWY+VKALLFSPDP LR QGVQHVAVW+SRER+PHAVE TSQLVEVRLNDVG A G G+A    +RSEEELRLIYS VV+RA+NGLTG EQK A AAPVSSLAR IGLP W+VDIRHEAAHKQ    LPGIV LRLAADFL+DYLWRR+W PQAEHL F+W AFDQLI R+ AT+      P  S+      +                      G  S  PP T          P G  ++AAS   AA   +AAHEIA S TPTALSWA+V+L+ADGG   GGGD   G      R QGHLLPRSRD YPTP +PGVD  +V+R++T R + L
Sbjct:    1 MIPWRDWDEWYRVKALLFSPDPYLRTQGVQHVAVWQSRERIPHAVETTSQLVEVRLNDVGAAKGGGLAFHGGQRSEEELRLIYSAVVVRAVNGLTGHEQKAAHAAPVSSLAREIGLPTWIVDIRHEAAHKQ----LPGIVSLRLAADFLVDYLWRRHWSPQAEHLGFVWGAFDQLIGRYKATSDSEALMPRSSSPGHAGRSSXXXXXXXXXXXXXXXXXXXXDGDSSSKPPGT----------PRGTGSSAASKPGAAAMEVAAHEIALSATPTALSWAVVALLADGGGRVGGGDCVGGVSGTKGRGQGHLLPRSRDKYPTPGTPGVDSRQVSRRLTARCSTL 329
[Close]
BLAST of mRNA_S-dermatodea_contig8428.16596.1 vs. uniprot
Match: D8LD46_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD46_ECTSI)

HSP 1 Score: 179 bits (455), Expect = 9.550e-48
Identity = 114/235 (48.51%), Postives = 135/235 (57.45%), Query Frame = 1 
Query:  712 PHGVNAAAASAAATSA--IAAHEIAFSVTPTALSWALVSLMADGGMGAGGGDGSRVVGAREQGHLLPRSRDTYPTPESPGVDDHEVARKITCRWAPLLDIFHARWRGFGAALLVRLVEALLDNAVRAQEFAPSGDAGPAVRVSRGGGGGSRAG-----------------LKRQAAFIALWVRHLLSRRWHLRGGDARIIQALRKLAVDSGLSPAFCKKQEGSWREEERAWADGP 1359
            P G  ++AAS   T+A  +AAHEIA S TPTALSWA+V+L+ADGG    GGD    VG REQGHLLPRSRD YPTP +PGVD  +V+R+++ RWA LLD+FH+RWRGFGAALLVRLVEALLDN         S   G AV     G                        L+RQAAFI +W R        +RG       ALR+ AV   L P F + +E  W E E  W D P
Sbjct:   60 PRGRGSSAASNPGTAAMEVAAHEIALSATPTALSWAVVALLADGGGRVRGGDFVGGVGGREQGHLLPRSRDKYPTPGTPGVDSRQVSRRLSARWATLLDMFHSRWRGFGAALLVRLVEALLDN--------DSSTPGEAVNADDDGTSACXXXXXXXXXXXXXXXXXXXXLERQAAFIEIWAR--------VRG-------ALREEAVHDRLPPTFFQAKEALWEENESTWVDKP 271
[Close]
BLAST of mRNA_S-dermatodea_contig8428.16596.1 vs. uniprot
Match: A0A835YSI0_9STRA (Las1-like protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSI0_9STRA)

HSP 1 Score: 171 bits (433), Expect = 3.810e-46
Identity = 86/175 (49.14%), Postives = 116/175 (66.29%), Query Frame = 1 
Query:    1 MDASACVPRMVPWRDWDEWYKVKALLFSPDPSLRCQGVQHVAVWRSRERVPHAVEATSQLVEVRLND----VGPAGCGVACPRRSEEELRLIYSTVVIRAINGLTGSEQKTAFAAPVSSLARTIGLPIWLVDIRHEAAHKQASGSLPGIVVLRLAADFLMDYLWRRYWGPQAEHL 513
            M   A  PR++PW++WDEW  V+ LL+SPDP  R +GV  VA WR RERVPHAVE T+QLVEV L++      P   G     R+  +LRL+YS+V++R +NGL  + QK A A  +  +AR IG+P WLVD+RH+AAHK     +P +   RLA+ FL+DYL +RYW  Q ++L
Sbjct:    1 MIGQASGPRLLPWQNWDEWVHVRGLLWSPDPVDRNEGVLRVAAWRCRERVPHAVECTAQLVEVALHEWRCSTYPGQYG-----RNSLQLRLMYSSVIVRTVNGLVEAHQKCAHAISIQQIARQIGIPSWLVDLRHDAAHKD----MPSLASFRLASAFLLDYLSQRYWDVQQQNL 166
[Close]
BLAST of mRNA_S-dermatodea_contig8428.16596.1 vs. uniprot
Match: A0A7S2RN98_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RN98_9STRA)

HSP 1 Score: 152 bits (385), Expect = 1.200e-38
Identity = 80/184 (43.48%), Postives = 112/184 (60.87%), Query Frame = 1 
Query:   22 PRMVPWRDWDEWYKVKALLFSPDPSLRCQGVQHVAVWRSRERVPHAVEATSQLVEVRLNDVGPAGCGVACPRRSEEELRLIYSTVVIRAINGLTGSEQKTAFAAPVSSLARTIGLPIWLVDIRHEAAHKQASGSLPGIVVLRLAADFLMDYLWRRYWGPQAEHLAFLWSAFDQLISRWGATTQR 573
            PR++PW+ WDEW++V+  LFS DP L+   V  VA WR R RVPHAVE+T+QLVEV L+D G  G        SE  L+  YS  V+RA+NG+  +EQ+ A A+ VS +A  +GLP WLVD+RH+A H     ++P +  LR+AA  L+ + +  YW  Q   L  L S    ++ R+ +   R
Sbjct:   19 PRVLPWQHWDEWFEVRDSLFSGDPLLQRAAVARVAAWRVRGRVPHAVESTAQLVEVMLDDQGRDGL-------SELVLQSCYSLSVVRAVNGVADAEQRGATASSVSLMASRVGLPTWLVDLRHDATHN----AMPPLQTLRVAAQTLVHWFFEGYWTSQTRQLESLESLCVSVVQRYHSCQNR 191
[Close]
BLAST of mRNA_S-dermatodea_contig8428.16596.1 vs. uniprot
Match: W7TDD9_9STRA (Las1-like family expressed n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TDD9_9STRA)

HSP 1 Score: 147 bits (372), Expect = 3.030e-34
Identity = 77/164 (46.95%), Postives = 101/164 (61.59%), Query Frame = 1 
Query:   22 PRMVPWRDWDEWYKVKALLFSPDPSLRCQGVQHVAVWRSRERVPHAVEATSQLVEVRLNDVGPAGCGVACPRRSEEELRLIYSTVVIRAINGLTGSEQKTAFAAPVSSLARTIGLPIWLVDIRHEAAHKQASGSLPGIVVLRLAADFLMDYLWRRYWGPQAEHL 513
            PR++PW+DW EW +   LLFS D   R QGV  V  WR+R R+P AV+AT+ ++EV L DV P         RS  ELR +YS V++RAINGL    Q   +A PV ++A  +G+P WLVD+RHEA H     SLP +  LR+ A  L+D+L R YW  Q + L
Sbjct:   14 PRVLPWQDWAEWTETSNLLFSIDIERRVQGVGRVKAWRARGRLPVAVDATAAILEVGLLDVHPNSTNSV---RSPTELRYLYSMVLVRAINGLVEGCQTKFYAEPVHAVAARLGIPQWLVDLRHEATH----ASLPSLSALRMGAQHLLDWLHRGYWEKQGQDL 170
[Close]
BLAST of mRNA_S-dermatodea_contig8428.16596.1 vs. uniprot
Match: A0A0N7L5Q0_PLAHL (Nuclear protein involved in cell morphogenesis and cell surface growth n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0N7L5Q0_PLAHL)

HSP 1 Score: 144 bits (362), Expect = 7.290e-33
Identity = 73/165 (44.24%), Postives = 101/165 (61.21%), Query Frame = 1 
Query:   13 ACVPRMVPWRDWDEWYKVKALLFSPDPSLRCQGVQHVAVWRSRERVPHAVEATSQLVEVRLND--VGPAGCGVACPRRSEEELRLIYSTVVIRAINGLTGSEQKTAFAAPVSSLARTIGLPIWLVDIRHEAAHKQASGSLPGIVVLRLAADFLMDYLWRRYWGPQ 501
            +C    VPW DW EW  V   LFS DP L+ + V  VA WRSR ++P A+ ATSQLVE++L++         V    RS  EL L+Y+ +++R +NGL  + QK  +A  VS+LA+ IG+P+W+VD+RHE+ H Q    LP + VLR AA  L+ +L   YW  Q
Sbjct:    2 SCRRNAVPWVDWVEWQDVHESLFSTDPFLQQRAVSRVAAWRSRTQLPVAINATSQLVELQLHESMAQHHHHAVGVSSRSHSELSLLYANIIVRCVNGLVDASQKGEYAHAVSTLAQRIGIPLWIVDLRHESTHNQ----LPSLPVLRFAARHLLAWLRANYWNAQ 162
[Close]
BLAST of mRNA_S-dermatodea_contig8428.16596.1 vs. uniprot
Match: W2QXV9_PHYPN (Uncharacterized protein n=7 Tax=Phytophthora TaxID=4783 RepID=W2QXV9_PHYPN)

HSP 1 Score: 143 bits (360), Expect = 1.510e-32
Identity = 72/161 (44.72%), Postives = 103/161 (63.98%), Query Frame = 1 
Query:   31 VPWRDWDEWYKVKALLFSPDPSLRCQGVQHVAVWRSRERVPHAVEATSQLVEVRLND--VGPAGCGVACPRRSEEELRLIYSTVVIRAINGLTGSEQKTAFAAPVSSLARTIGLPIWLVDIRHEAAHKQASGSLPGIVVLRLAADFLMDYLWRRYWGPQAE 507
            +PW DW EW +V   LFS DP  + + V  VA WRSR ++P A+ AT+QLVE++L++         V    RS  EL L+Y++V++R +NGL    QK A+A  VS+LA+ IG+P+W+VD+RHE++H Q    LP + VLR AA  L+ +L   YWG Q +
Sbjct:    8 LPWLDWAEWQEVHVGLFSSDPFAQQRVVSRVASWRSRVQLPVAINATAQLVELQLHESMAQHHHHAVGVSSRSHMELSLLYASVIVRCVNGLVDGSQKGAYATAVSTLAQRIGIPLWIVDLRHESSHNQ----LPSLPVLRFAAQHLLAWLRSNYWGAQED 164
[Close]
BLAST of mRNA_S-dermatodea_contig8428.16596.1 vs. uniprot
Match: A0A329SSQ6_9STRA (Uncharacterized protein n=1 Tax=Phytophthora cactorum TaxID=29920 RepID=A0A329SSQ6_9STRA)

HSP 1 Score: 142 bits (359), Expect = 2.010e-32
Identity = 73/161 (45.34%), Postives = 102/161 (63.35%), Query Frame = 1 
Query:   31 VPWRDWDEWYKVKALLFSPDPSLRCQGVQHVAVWRSRERVPHAVEATSQLVEVRLNDVGPAGC--GVACPRRSEEELRLIYSTVVIRAINGLTGSEQKTAFAAPVSSLARTIGLPIWLVDIRHEAAHKQASGSLPGIVVLRLAADFLMDYLWRRYWGPQAE 507
            VPW DW EW +V   LFS DP  + + V  VA WRSR ++P A+ AT+QLVE++L+          V    RS  EL L+Y++V++R +NGL    QK A+A  VS+LA+ IG+P+W+VD+RHE++H Q    LP + VLR AA  L+ +L   YWG Q +
Sbjct:    8 VPWLDWAEWQEVHVGLFSSDPFAQQRVVSRVASWRSRMQLPVAINATAQLVELQLHQSMAQNHHHAVGVSSRSHMELSLLYASVIVRCVNGLVDGSQKGAYAMAVSTLAQRIGIPLWIVDLRHESSHNQ----LPSLPVLRFAARHLLAWLRSNYWGAQED 164
[Close]
BLAST of mRNA_S-dermatodea_contig8428.16596.1 vs. uniprot
Match: D0MVU1_PHYIT (Uncharacterized protein n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0MVU1_PHYIT)

HSP 1 Score: 142 bits (357), Expect = 2.170e-32
Identity = 78/179 (43.58%), Postives = 107/179 (59.78%), Query Frame = 1 
Query:   31 VPWRDWDEWYKVKALLFSPDPSLRCQGVQHVAVWRSRERVPHAVEATSQLVEVRLND--VGPAGCGVACPRRSEEELRLIYSTVVIRAINGLTGSEQKTAFAAPVSSLARTIGLPIWLVDIRHEAAHKQASGSLPGIVVLRLAADFLMDYLWRRYWGPQAE------HLAFLWSAFDQL 543
            VPW DW EW +V   LFS D  ++ + V  VA WRSR ++P AV AT+QLVE+ L++         V    RS  EL L+Y++V++R +NGL    QK A+A  VS+LA  IG+P+W+VD+RHE++H Q    LP + VLR AA  L+ +L   YWG Q +      H    W  F+QL
Sbjct:    8 VPWLDWSEWQEVHVGLFSTDLFVQQRAVSRVASWRSRVQLPVAVNATAQLVELLLHESMAQHHHHAVGVSSRSHMELSLLYASVIVRCVNGLVDGSQKGAYATAVSTLAHRIGIPLWVVDLRHESSHNQ----LPSLPVLRFAAQHLLAWLRANYWGAQEDLIRGQVHQVAQW-LFEQL 181
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig8428.16596.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JW11_9PHAE1.490e-18749.04Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FGU4_ECTSI4.120e-11660.35Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LD46_ECTSI9.550e-4848.51Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835YSI0_9STRA3.810e-4649.14Las1-like protein (Fragment) n=1 Tax=Tribonema min... [more]
A0A7S2RN98_9STRA1.200e-3843.48Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
W7TDD9_9STRA3.030e-3446.95Las1-like family expressed n=2 Tax=Monodopsidaceae... [more]
A0A0N7L5Q0_PLAHL7.290e-3344.24Nuclear protein involved in cell morphogenesis and... [more]
W2QXV9_PHYPN1.510e-3244.72Uncharacterized protein n=7 Tax=Phytophthora TaxID... [more]
A0A329SSQ6_9STRA2.010e-3245.34Uncharacterized protein n=1 Tax=Phytophthora cacto... [more]
D0MVU1_PHYIT2.170e-3243.58Uncharacterized protein n=2 Tax=Phytophthora infes... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig8428contigS-dermatodea_contig8428:571..8490 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score370.2
Seed ortholog evalue2.2e-99
Seed eggNOG ortholog2880.D7FGU4
Preferred nameLAS1L
KEGG koko:K05956,ko:K16912
GOsGO:0000460,GO:0000469,GO:0000470,GO:0000478,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0006139,GO:0006325,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016043,GO:0016070,GO:0016072,GO:0022613,GO:0030684,GO:0030687,GO:0031974,GO:0031981,GO:0032991,GO:0034470,GO:0034641,GO:0034660,GO:0034708,GO:0035097,GO:0042254,GO:0042273,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0044085,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044451,GO:0044464,GO:0044665,GO:0046483,GO:0051276,GO:0070013,GO:0071339,GO:0071704,GO:0071840,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:1901360,GO:1902494,GO:1990234,GO:1990904
EggNOG free text desc.endonucleolytic cleavage involved in rRNA processing
EggNOG OGsKOG2425@1,KOG2425@2759
Ec32 ortholog descriptionhypothetical protein
Ec32 orthologEc-11_000410.3
EC2.5.1.60
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko01006,ko03009,ko04131
Hectar predicted targeting categoryother localisation
Exons11
Model size2118
Cds size2118
Stop1
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622925342.3909678-CDS-S-dermatodea_contig8428:570..6391622925342.3909678-CDS-S-dermatodea_contig8428:570..639Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8428 571..639 +
1694079868.627847-CDS-S-dermatodea_contig8428:570..6391694079868.627847-CDS-S-dermatodea_contig8428:570..639Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8428 571..639 +
1622925342.4021187-CDS-S-dermatodea_contig8428:1002..11101622925342.4021187-CDS-S-dermatodea_contig8428:1002..1110Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8428 1003..1110 +
1694079868.643566-CDS-S-dermatodea_contig8428:1002..11101694079868.643566-CDS-S-dermatodea_contig8428:1002..1110Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8428 1003..1110 +
1622925342.4135687-CDS-S-dermatodea_contig8428:2204..23451622925342.4135687-CDS-S-dermatodea_contig8428:2204..2345Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8428 2205..2345 +
1694079868.6593475-CDS-S-dermatodea_contig8428:2204..23451694079868.6593475-CDS-S-dermatodea_contig8428:2204..2345Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8428 2205..2345 +
1622925342.425867-CDS-S-dermatodea_contig8428:3506..36111622925342.425867-CDS-S-dermatodea_contig8428:3506..3611Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8428 3507..3611 +
1694079868.6701486-CDS-S-dermatodea_contig8428:3506..36111694079868.6701486-CDS-S-dermatodea_contig8428:3506..3611Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8428 3507..3611 +
1622925342.4373443-CDS-S-dermatodea_contig8428:4113..42511622925342.4373443-CDS-S-dermatodea_contig8428:4113..4251Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8428 4114..4251 +
1694079868.6806495-CDS-S-dermatodea_contig8428:4113..42511694079868.6806495-CDS-S-dermatodea_contig8428:4113..4251Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8428 4114..4251 +
1622925342.4500618-CDS-S-dermatodea_contig8428:4852..52241622925342.4500618-CDS-S-dermatodea_contig8428:4852..5224Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8428 4853..5224 +
1694079868.6906648-CDS-S-dermatodea_contig8428:4852..52241694079868.6906648-CDS-S-dermatodea_contig8428:4852..5224Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8428 4853..5224 +
1622925342.4661329-CDS-S-dermatodea_contig8428:5567..56171622925342.4661329-CDS-S-dermatodea_contig8428:5567..5617Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8428 5568..5617 +
1694079868.7042663-CDS-S-dermatodea_contig8428:5567..56171694079868.7042663-CDS-S-dermatodea_contig8428:5567..5617Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8428 5568..5617 +
1622925342.4789062-CDS-S-dermatodea_contig8428:6546..68051622925342.4789062-CDS-S-dermatodea_contig8428:6546..6805Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8428 6547..6805 +
1694079868.7190518-CDS-S-dermatodea_contig8428:6546..68051694079868.7190518-CDS-S-dermatodea_contig8428:6546..6805Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8428 6547..6805 +
1622925342.4889534-CDS-S-dermatodea_contig8428:7293..74111622925342.4889534-CDS-S-dermatodea_contig8428:7293..7411Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8428 7294..7411 +
1694079868.732153-CDS-S-dermatodea_contig8428:7293..74111694079868.732153-CDS-S-dermatodea_contig8428:7293..7411Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8428 7294..7411 +
1622925342.5004308-CDS-S-dermatodea_contig8428:7660..82991622925342.5004308-CDS-S-dermatodea_contig8428:7660..8299Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8428 7661..8299 +
1694079868.7437854-CDS-S-dermatodea_contig8428:7660..82991694079868.7437854-CDS-S-dermatodea_contig8428:7660..8299Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8428 7661..8299 +
1622925342.5114272-CDS-S-dermatodea_contig8428:8371..84901622925342.5114272-CDS-S-dermatodea_contig8428:8371..8490Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8428 8372..8490 +
1694079868.7564678-CDS-S-dermatodea_contig8428:8371..84901694079868.7564678-CDS-S-dermatodea_contig8428:8371..8490Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8428 8372..8490 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig8428.16596.1prot_S-dermatodea_contig8428.16596.1Saccorhiza dermatodea SderLu1190fm monoicouspolypeptideS-dermatodea_contig8428 571..8490 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-dermatodea_contig8428.16596.1

>prot_S-dermatodea_contig8428.16596.1 ID=prot_S-dermatodea_contig8428.16596.1|Name=mRNA_S-dermatodea_contig8428.16596.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=706bp
MDASACVPRMVPWRDWDEWYKVKALLFSPDPSLRCQGVQHVAVWRSRERV
PHAVEATSQLVEVRLNDVGPAGCGVACPRRSEEELRLIYSTVVIRAINGL
TGSEQKTAFAAPVSSLARTIGLPIWLVDIRHEAAHKQASGSLPGIVVLRL
AADFLMDYLWRRYWGPQAEHLAFLWSAFDQLISRWGATTQRAPASPAGSA
SSDRAAADIVSGGSSCSGSRSRSPPDTADSVANSASGPHGVNAAAASAAA
TSAIAAHEIAFSVTPTALSWALVSLMADGGMGAGGGDGSRVVGAREQGHL
LPRSRDTYPTPESPGVDDHEVARKITCRWAPLLDIFHARWRGFGAALLVR
LVEALLDNAVRAQEFAPSGDAGPAVRVSRGGGGGSRAGLKRQAAFIALWV
RHLLSRRWHLRGGDARIIQALRKLAVDSGLSPAFCKKQEGSWREEERAWA
DGPAPPAVLRVAFFPVRELLGRCSRSLLTLAVRQTSAPADTSSRDDISPD
ETADCSGNSETSTAHWAKAGLDAVCHALDAALPGKETAGSHREDMVGGGR
ANLRCGRRASSCSRAGVPPPPEGLAADASTPSPGVGCGGKRSRRRYPPAE
ESGECEEVEGSGAVDAGVGLGEAPIAMMNLQALERLLGAEGPPDPCPGAV
PLASVGLSKLKTDATSGVLDEVSEDCGAWELVEGWTPCAIGTLPGWSGAR
LGTEL*
back to top

mRNA from alignment at S-dermatodea_contig8428:571..8490+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-dermatodea_contig8428.16596.1 ID=mRNA_S-dermatodea_contig8428.16596.1|Name=mRNA_S-dermatodea_contig8428.16596.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=7920bp|location=Sequence derived from alignment at S-dermatodea_contig8428:571..8490+ (Saccorhiza dermatodea SderLu1190fm monoicous)
ATGGATGCAAGCGCGTGTGTGCCTCGCATGGTGCCCTGGCGAGACTGGGA
TGAATGGTATAAGGTGAAGGTGAGCGGAACTGCTGTTGAGAGCAGCGGCG
CAACCGTCCCTTGTCTGGTCTGGTGTTGGATGAATGTCTGCTGTGGATGC
CTCTCGTTGTGCGAGGCCTGCTGTTTGCTGACGCGTCTGCTGGTCGTGGA
GTGCCGGTTGCACGGAGAAAATTTCCTCCGCCGTGAAGCGCGCGGTGTGT
ACGTCTCTTGAAGGCTACAATGCTCTAATGTTTATGTGCGGTGAACCATT
CTTCATTCAGCCTGAGGGAGGCCACCAAACCTGACAGTCCCGTGCGATAT
GTCCCAATGGCGTAACGGGTGACGGCCTCTGATTGCTGTCCGTTACATCG
GCCCGACTTCCCGCCCTCAACGCTGTTGGCAGGCGCTTCTCTTCTCGCCC
GACCCGAGCCTTCGCTGTCAGGGCGTACAACACGTGGCCGTGTGGCGCAG
CCGAGAGCGCGTCCCACACGCAGTCGAGGCAACCTCGCAGGTATGTACTC
AAGGCATGACAGCAGTATATATCATTAATACTACTGGTATATCGCGTAAA
GAAGTGTGTACCTCGTGTAGGAGCTAAATGCTTGGGTCGTCGTCTTGGTG
TGAACCAAAGTGCCATCATATGATAGTACTGCTGTGGTGCGCTTACATAT
CTTGTACAAGTACCTTCATTATCCGGCATGTTTCTTGAAAGCCCTAATAA
GAGGGGATATCTAGAGGTAGATAGTGATAGACCAACACGATTTATATAAG
TACAAGTGTTAACACTCTTTACCCAACGTCCGAAACCCTAAACCCACATC
CCAATCAGACTCCTGCGGACATTCCGCATCCTTCTCGAAAGCTCATGATC
TGACTGTACTACTGCTGCTTTACTGTATCCAGCAAATTGAACGGATGCCG
GCCAATCTCGCAGGCTCTCGAAAGGAGTACATAAGTTCCAGAATACGCAT
CTTTATCTGTCTCAGGGTCGCTATGAGAGCGCTCTAGACACAGCCCTCCA
GCTGTAACGTGGTACAAGTATCATACTGCGTATTTTTCCTTCCCTCTGCC
GCACCTCCTGCGACCCCCTTCACAAAATGGGTAACCGTTGACCGCGCGCA
ACACCCCGCTGCGCTTGCTACGCTGATCATTGCCAACTCTGCCGAATGCT
TGGCAATAGTCGGTTAGTCGACTGTCGCGAGCGACTATGCCTACTTGTAT
GACTTCAGTGAGCTTGCTGCGCCCACCAACTCGCCGTTGCAGTGTATAGG
TCGAGGGTGCTCAAGAGCGTTCGATGCAAGTCCAAGATTTTCATGTTGCG
GATGGCAGTCAACATGCATCTCTTGACTGCTACCTACTGCACTATCCCTC
CCAAACGCCGCCCCAAAGCGATCGAACTCTTCGGGGATGCGAGTCTGTCG
TTTCTCTCTTATTCGAACTGGGATGCGTACTCTCTTATTCAAAAGTAGTT
CGCAACTGTAATCAACATAGAGTTCTACTGTATGTGTTCGCCGTGCGCGC
GCGTGTTACGCCGGCCAAGCTTACATACAACTTATGTTTTCGCACGTTTG
CATGTACATGGTGGCGCTGTTTCTGTCTACTCAGCTAGTGGAGGTTCGGC
TTAACGACGTCGGGCCGGCGGGGTGCGGGGTTGCGTGCCCTCGGCGAAGC
GAAGAGGAGCTGCGGCTGATCTACAGCACCGTCGTCATCAGGGCGATCAA
TGGGCTCACCGGAAGCGAGCAAAAGGTGCGAAAGCGCCCTCTCAATCGGC
AAAGAACGTAGTATGTGATACGGGGTGCAAACACAACAGTTCCTCCTTCC
GCTTTTCCGCGGAAAGTGGGGGGGGGGGGGGGGCATGAGCAAGCTACTAC
TGTAGACCAGAGATATCGGCGAGGGAGCTTCCGGAGCGCTGAACTTAACG
CGCGATGTAAATCGCAGGCGAAAATCGAAGGGGCATGCTGGGGTGGGGGG
GGGTGGGGTGGTTCCATTTGACGACAGACGATACCTGGATTGCTGTTACG
GAGGAACAGAAGCAGTAGTTAATAGAACCAATATAAAATTAACAAAGTTT
TCCTCAATAGTATACGTACCACCTTGTGAAAAAGCGAGTCTGGCCTTACA
GCATCTACGCTCTTCCGGCCACCATTAAGGTGTCTTCTTCTACCAATTAA
AGTTTAAGGGTAGGATAATATCAAGAAGAGGTCGAGTCATTGTTTTAGCA
CAAGGCTCGAGTGTCCTATTTCTTACCGGGTAGAAATGTTATCATTTTAT
AGGTCTGTGAACTATGTTCCATCCCGTAATAGACTGATCCACACGAAGTG
AGCACACAACGGCGGCTGCGGGCGCGTGCTGCTTCGAGAGTTCTTGGGCT
TGAGTGCTCATGGGTCTGACGCGCCGCCATACATCCTTGCACACGTCGGA
CAACTCAACTCAGGTTAACTCGAGTTAACTCATTTTCACACAACTCACCT
GTTGAGTTATGCAACATAACTCAGTGGTGCATTTTTCACTCGGCTGAGTT
ATACAACATAACTCAGTGGTGGATTTTTCACTCGGGTGAGTTATTCAAGA
CAACTCAGTTGTACATTTTCGACGTGGGTGAGTTATACAAGATAACTCAG
TGGTGCATTTTCGACGTGGGTGAGTTGTACAAGACAACTCAGTGGTGCAT
TTTTCACTCGGCTGAGTTATACAGGACAACTGCGTTAACTCATGAGTTGT
CCGACGTGTGCATCCTTGTGAATAGAGACCACGCACTATGTTCTGGCTTG
CCCAGCAAACTCAATACCTGCTGTCAGCCGTCTCCTGATAACAGGCACCA
AACATCACGATGCGTTGGTGAAACCTTTCTGCCCCGCCCGCCGCCTGTCG
TGTCTTAATCGCGCTTGTGTACACCCCTCAATACAGACGGCGTTCGCGGC
TCCCGTCTCCTCCCTCGCGAGAACGATCGGACTGCCTATCTGGTTGGTCG
ACATTCGCCACGAGGCTGCGCACAAGCAGGCAAGCGGGTCTGTTCGCGAG
CGGCGGGCTGGGGACGTAGGCGCTCGCCATCATAGAAGGCTTCGGTATTA
TGCCGTCGTCGCGTATCACAACAAGCAAGTATTTTATGGTGGGATTGGTT
CGCTGCGAGAGAGTGCTGCCACAGGAAGTTGGATGGGGTGGTTAATAGTC
GTTTATTTCCTCTTTGTGTTGGATTTTTTACAGTCGCAATGCGGGTGCGA
CGGACTAAGCGGCGGTGTCGACCAGAGAAGAGCGCAGCCTTAGCGCGCGC
CATGCGAGTATTGTGCATCAGTATTTTACCGGCAACCCGTCCGCCGAAGA
CCCATCTTCCGCTACGCTATCATTGCGCAGTGGATAAACGTCGCCGCGAT
CGATTGCTACCCCTTCCTTTTCCCCCGGCGGTAATTGCTCAATATTCTCA
AACCTCAAGTGCCGTGCTGCGAAAGAACAACGTGAGTTGTGATCCCCCTT
TCAGCTTGTTTTTTTCGTTGCATTGCTCGGTGTCCCGTATCAGTTGCCGG
GAATCGTCGTCCTTCGGCTAGCCGCGGATTTCCTCATGGACTACCTTTGG
AGGCGGTATTGGGGCCCACAAGCAGAGCACCTTGCGTTCTTATGGAGCGC
CTTTGACCAGCTCATCTCGAGGTGGGGTGCTGTGGGGGGGGGGACGGGGC
GGTTACCCTTTCTCGCGTATTTGTGTCGCTGTCATAACACAACCGCAGCT
TGTCGCTGTCAAGTATCGCGGCTGTGTCACATGTGACTGATCGTGCTAAT
GAATTACTGCCTGCTTGTGCACTACGGAGTCTACACGCATCCCTCTGTGC
GCGCGATAAGCCCTCGCGATGGTTGTCAGAGTGAAGAGCCGTGGAGTTCA
ATCATGCCGGCATTGGACATACAATTATCTAATTTCTAAGCACCATGCAG
CAATGTTACTTTCCGTATTGTGTACAGCCGGTGGTCAATAGAAACCGCGT
AAAGCAATACCCCCGCCCCCCCGCTTCTCCCGGCTACTCCCGTTTCACGC
TCTTCGGAGTACATCGGTTGCATGTCCACCATGTCGTGGGGGCCACGTTT
CCAACTGGTAGCACTACTCCCCTTTTCCCTCTATTGCCGCCAGGTTCAAG
GCCACCAGCGAAACAGACGCCTCGCTCTGGTGCAACTCCCCGGGCGCTCG
CCGCTCCGCCGCCCTCGCACCCGACGCATCCGCGTCTGGGTCCTCACTTC
TCCCCCATGCGGCTAAGAAACGGCGAGGCGAGACCACCCAACGTGCGCCG
GCATCGCCAGCGGGCAGTGCTTCTTCCGACCGTGCTGCCGCCGACATTGT
TTCCGGAGGATCATCGTGTTCGGGAAGCCGATCCCGCTCGCCGCCTGACA
CCGCGGATTCTGTGGCAAACTCGGCGTCGGGACCCCATGGGGTCAATGCC
GCTGCCGCCTCTGCCGCCGCCACCTCAGCGATAGCGGCGCACGAGATCGC
ATTTTCCGTGACACCCACCGCGTTGTCCTGGGCCCTGGTGTCCCTGATGG
CGGATGGGGGCATGGGGGCGGGAGGCGGCGACGGGAGCAGGGTGGTGGGG
GCGAGGGAGCAGGGGCATCTGCTACCTCGCTCGAGGGATACCTACCCGAC
ACCGGTGAGAGGATTGGCGTGTCCCGCGCGGCTTTGTCGCGTTGTCGATG
GTTGTGGTAACGGTGCCAGCCGCCTCCCTGTCCTTGCCGAAGTACGTCGG
TAGTTGTCGTTGAAAATTTGCAGCATGAGGCAGCCTTACGGCTTAGTGTA
ATGATGGGGCGTGAGGGTAGTGAGCGCGCTGACCTCGTCACGTTTTGCGT
TTGTTTCTGCTCGAAAGGCTCGAGGTTGCCTATAAAAACAAGGTGTCGAC
CCCGGGGGATTTTGCACATGCAGCGGGTGGCTACACCCTCGATTACGACA
GCCTTGATGACACCTCGATGCCCACCCTTCTAAATCAATTCGCGCAGGAA
TCCCCAGGAGTCGACGATCACGAAGTCGCTCGCAAGATCACTTGCAGGTA
GGTCGAGGTGGTGATTGCCCATCTATCGTATAATGCAGTTTGGCTGTCCT
GTTAAAAGCACCATTGCTACAGTATGCATTGACACAGCAATTCATTTTGC
ACCGTAGATGTGGCACGCTGCCATGCGTTGGTCACCGCGTTGCCATAGTG
CACGCACCAGTGACCTTGTTGACGACCAACAGAGTGCTCAACACGCCTCG
GCTCATCGTTGGCATCGATCTCGCAAGCACGGCTTTTTGCCTGGCGATCG
ATGTGGCCTCTGAAACACTTCCGCCTAAAATAGTGTCCACATCGCGTATC
GTACGCAGTCGTCGGCTGCCGAAGGAGATTCCCACACCTCCAACTATATC
CCTTATGGCACTGAGGTCCGTTTTTGCGCAGAATGTCCTCAGTAGGGGTA
TATTACATAGTATACCAGTAACATATACTATGTAGTATTTGGTATATCGC
GGTCACCCACCGTGCATGCGAGCTAAGCGTGGCAGGGTAACCACAACTTT
TCCACCGCCGCTGAGGTATCCCACCTCAGGGGTTACACGTTTCATCGCAC
GAGAGCCACCTTAGACGCGCGGATCCAAACCCCACGACGTGACGATATAT
TTGCCCGGCCGGGTGGCCCATCAATGTTCGCCGCAAAATGGTACCAATGC
CAGAGAAAACCACGGCCTGTTTTGCTTGAGCCAGCGATGTATCTTTTGCC
CAAGCGGTTCCAAACGTGGGTTAGGTCGTGCAATCAAGCGCCCCCAAATG
CACCCCCCCAACATGGGACAACTCCGGTACGTGCGGAGAGGATTGACCAC
CGTTCGGAAACTGAACCAGTTCGATGTCAAATTCGGTGCGGGCAGATGGC
CTAACCCCGAAAACAGGCTAGGTTCAGTCCGAAAAGGGTTATATCCCCTT
TGCCTGGTATGTTGTTACCGTCACAGGTGGGCCCCTCTGCTGGACATATT
CCACGCCAGGTGGAGAGGTTTCGGAGCCGCGCTACTCGTTCGGCTGGTAG
AGGCTCTCCTAGACAATGCGGTGCGCGCGCAAGAGTTCGCCCCTAGCGGC
GACGCTGGGCCGGCGGTGCGTGTATCCCGCGGCGGCGGCGGTGGCAGCCG
CGCGGGGCTTAAACGGCAGGCAGCTTTCATCGCCCTGTGGGTGCGGCATC
TTTTGAGTCGACGGTGGCATCTACGCGGTGGCGATGTGAGAGCAGGGCGT
CGCTGTGTGTATTATTTCGGCTGGAGAGGGTCACTAGGGGCCATATTTGA
TTATTCATAGGTGTGGATCAGCAATAGGGCTCCTCGCGCTAGAGTACATA
GGGATTGCTTGGATTCGCTCTAAGCCTTTTGTTTTTGGTTGCCGAGGGGT
AGAGGATCGTGTCGTCCAGACCGCGAGGTGGAAATCCAGGCAGCAATAGT
GTTGTTACAACGTGGACGGTAGTTAATGCTCTTTTTGAATCCGAGGAATC
GGCAAGCTGCGGAAGTGCTGAATCCCATGCGCGATAATGATCTAAGGCAA
GAACTGGGGAGAGATGGGATAGTCGATCCCTCGTGACCTCCAAAGACGGG
ATGCGGACAAGGCTGGTCAGTCGCACGTGAGCCGCACACACACGCACACG
CTTTGCCGCGTATACGCCGCCGCATCAACCGTTGTATCTCCGTGGCGACG
TTCGTTTCGTGCGTGCCCTGCAGGCAAGGATAATACAAGCTCTGCGAAAG
TTGGCCGTCGATTCCGGCTTGTCGCCCGCGTTTTGCAAGAAGCAGGAGGG
GTCGTGGAGAGAAGAGGAAAGGGCGTGGGCAGACGGGCCAGGTGAGGCGC
CCCAATTCACCAAATATTGTTATTGTCCCGATTCTTAGAGCATGAAGATG
GTGGTGCTCTCCCCAAGCACAGAGCACCTGTAACATCACAAAACGTTCAT
TGCATGCAACTCTTTGATGGAGTGGACAACAACTCGTGGTTGATCTCAGT
GCTGCTACATCCTTCCGGACGCTGCTCTCTGTCTCTCTTTCTCTGTCTCT
CTCTCTCTCTCGATCGACCGCCGCGCCCTTTCCTCTGCAGCGCCCCCGGC
AGTACTCCGCGTTGCGTTCTTCCCCGTGCGCGAGCTGCTGGGGCGATGCA
GCCGGTCGCTCTTAACACTCGCAGTTCGCCAGACTAGCGCCCCGGCGGAT
ACAAGCAGCCGGGACGACATCAGTCCTGATGAGACCGCCGATTGCAGCGG
TAACAGCGAGACCAGCACGGCCCATTGGGCGAAGGCAGGGCTCGACGCGG
TTTGCCACGCCCTAGACGCTGCACTTCCGGGGAAAGAGACCGCGGGTTCT
CACCGCGAAGACATGGTCGGCGGTGGCCGTGCAAATCTCAGATGTGGACG
ACGGGCGAGCTCCTGTTCGAGGGCTGGGGTTCCCCCTCCACCGGAAGGCC
TCGCAGCTGACGCCTCTACACCATCTCCTGGCGTAGGTTGCGGTGGTAAG
CGAAGCCGGAGGAGGTATCCCCCTGCCGAAGAGAGTGGCGAATGCGAGGA
GGTGGAGGGTTCTGGTGCGGTGGACGCTGGTGTGGGCCTAGGGGAAGCAC
CGATAGCGATGATGAACCTGCAGGCCCTCGAGCGATTACTGGGCGCGGAG
GGTCCCCCGGATCCATGCCCGGGAGCTGTTCCACTCGCGTCGGTGGGACT
GTCGAAGCTGAAAACTGACGCAACTAGTGGTGGCGATGATTATGATGATG
CAGGTGGACGGGAGGAAGTCTGCCGCGAGGTTGCGAGGGGCGTGGAAGGA
GGCGTTCTTGACGAGGTATCCGAGGACTGTGGCGCGTGGGAGTTGGTGGA
GGGATGGACGCCGTGTGCCATAGGCACGTTGCCAGGATGGTCCGGTGCGC
GCCTTGGGACGGAGCTTTAG
back to top

Coding sequence (CDS) from alignment at S-dermatodea_contig8428:571..8490+

>mRNA_S-dermatodea_contig8428.16596.1 ID=mRNA_S-dermatodea_contig8428.16596.1|Name=mRNA_S-dermatodea_contig8428.16596.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=4236bp|location=Sequence derived from alignment at S-dermatodea_contig8428:571..8490+ (Saccorhiza dermatodea SderLu1190fm monoicous)
ATGGATGCAAGCGCGTGTGTGCCTCGCATGGTGCCCTGGCGAGACTGGGA
TGAATGGTATAAGGTGAAGATGGATGCAAGCGCGTGTGTGCCTCGCATGG
TGCCCTGGCGAGACTGGGATGAATGGTATAAGGTGAAGGCGCTTCTCTTC
TCGCCCGACCCGAGCCTTCGCTGTCAGGGCGTACAACACGTGGCCGTGTG
GCGCAGCCGAGAGCGCGTCCCACACGCAGTCGAGGCAACCTCGCAGGCGC
TTCTCTTCTCGCCCGACCCGAGCCTTCGCTGTCAGGGCGTACAACACGTG
GCCGTGTGGCGCAGCCGAGAGCGCGTCCCACACGCAGTCGAGGCAACCTC
GCAGCTAGTGGAGGTTCGGCTTAACGACGTCGGGCCGGCGGGGTGCGGGG
TTGCGTGCCCTCGGCGAAGCGAAGAGGAGCTGCGGCTGATCTACAGCACC
GTCGTCATCAGGGCGATCAATGGGCTCACCGGAAGCGAGCAAAAGCTAGT
GGAGGTTCGGCTTAACGACGTCGGGCCGGCGGGGTGCGGGGTTGCGTGCC
CTCGGCGAAGCGAAGAGGAGCTGCGGCTGATCTACAGCACCGTCGTCATC
AGGGCGATCAATGGGCTCACCGGAAGCGAGCAAAAGACGGCGTTCGCGGC
TCCCGTCTCCTCCCTCGCGAGAACGATCGGACTGCCTATCTGGTTGGTCG
ACATTCGCCACGAGGCTGCGCACAAGCAGGCAAGCGGGTCTACGGCGTTC
GCGGCTCCCGTCTCCTCCCTCGCGAGAACGATCGGACTGCCTATCTGGTT
GGTCGACATTCGCCACGAGGCTGCGCACAAGCAGGCAAGCGGGTCTTTGC
CGGGAATCGTCGTCCTTCGGCTAGCCGCGGATTTCCTCATGGACTACCTT
TGGAGGCGGTATTGGGGCCCACAAGCAGAGCACCTTGCGTTCTTATGGAG
CGCCTTTGACCAGCTCATCTCGAGGTGGGGTGCTTTGCCGGGAATCGTCG
TCCTTCGGCTAGCCGCGGATTTCCTCATGGACTACCTTTGGAGGCGGTAT
TGGGGCCCACAAGCAGAGCACCTTGCGTTCTTATGGAGCGCCTTTGACCA
GCTCATCTCGAGGTGGGGTGCTACCACCCAACGTGCGCCGGCATCGCCAG
CGGGCAGTGCTTCTTCCGACCGTGCTGCCGCCGACATTGTTTCCGGAGGA
TCATCGTGTTCGGGAAGCCGATCCCGCTCGCCGCCTGACACCGCGGATTC
TGTGGCAAACTCGGCGTCGGGACCCCATGGGGTCAATGCCGCTGCCGCCT
CTGCCGCCGCCACCTCAGCGATAGCGGCGCACGAGATCGCATTTTCCGTG
ACACCCACCGCGTTGTCCTGGGCCCTGGTGTCCCTGATGGCGGATGGGGG
CATGGGGGCGGGAGGCGGCGACGGGAGCAGGGTGGTGGGGGCGAGGGAGC
AGGGGCATCTGCTACCTCGCTCGAGGGATACCTACCCGACACCGACCACC
CAACGTGCGCCGGCATCGCCAGCGGGCAGTGCTTCTTCCGACCGTGCTGC
CGCCGACATTGTTTCCGGAGGATCATCGTGTTCGGGAAGCCGATCCCGCT
CGCCGCCTGACACCGCGGATTCTGTGGCAAACTCGGCGTCGGGACCCCAT
GGGGTCAATGCCGCTGCCGCCTCTGCCGCCGCCACCTCAGCGATAGCGGC
GCACGAGATCGCATTTTCCGTGACACCCACCGCGTTGTCCTGGGCCCTGG
TGTCCCTGATGGCGGATGGGGGCATGGGGGCGGGAGGCGGCGACGGGAGC
AGGGTGGTGGGGGCGAGGGAGCAGGGGCATCTGCTACCTCGCTCGAGGGA
TACCTACCCGACACCGGAATCCCCAGGAGTCGACGATCACGAAGTCGCTC
GCAAGATCACTTGCAGGAATCCCCAGGAGTCGACGATCACGAAGTCGCTC
GCAAGATCACTTGCAGGTGGGCCCCTCTGCTGGACATATTCCACGCCAGG
TGGAGAGGTTTCGGAGCCGCGCTACTCGTTCGGCTGGTAGAGGCTCTCCT
AGACAATGCGGTGCGCGCGCAAGAGTTCGCCCCTAGCGGCGACGCTGGGC
CGGCGGTGCGTGTATCCCGCGGCGGCGGCGGTGGCAGCCGCGCGGGGCTT
AAACGGCAGGCAGCTTTCATCGCCCTGTGGGTGCGGCATCTTTTGAGTCG
ACGGTGGCATCTACGCGGTGGCGATGTGGGCCCCTCTGCTGGACATATTC
CACGCCAGGTGGAGAGGTTTCGGAGCCGCGCTACTCGTTCGGCTGGTAGA
GGCTCTCCTAGACAATGCGGTGCGCGCGCAAGAGTTCGCCCCTAGCGGCG
ACGCTGGGCCGGCGGTGCGTGTATCCCGCGGCGGCGGCGGTGGCAGCCGC
GCGGGGCTTAAACGGCAGGCAGCTTTCATCGCCCTGTGGGTGCGGCATCT
TTTGAGTCGACGGTGGCATCTACGCGGTGGCGATGCAAGGATAATACAAG
CTCTGCGAAAGTTGGCCGTCGATTCCGGCTTGTCGCCCGCGTTTTGCAAG
AAGCAGGAGGGGTCGTGGAGAGAAGAGGAAAGGGCGTGGGCAGACGGGCC
AGGCAAGGATAATACAAGCTCTGCGAAAGTTGGCCGTCGATTCCGGCTTG
TCGCCCGCGTTTTGCAAGAAGCAGGAGGGGTCGTGGAGAGAAGAGGAAAG
GGCGTGGGCAGACGGGCCAGCGCCCCCGGCAGTACTCCGCGTTGCGTTCT
TCCCCGTGCGCGAGCTGCTGGGGCGATGCAGCCGGTCGCTCTTAACACTC
GCAGTTCGCCAGACTAGCGCCCCGGCGGATACAAGCAGCCGGGACGACAT
CAGTCCTGATGAGACCGCCGATTGCAGCGGTAACAGCGAGACCAGCACGG
CCCATTGGGCGAAGGCAGGGCTCGACGCGGTTTGCCACGCCCTAGACGCT
GCACTTCCGGGGAAAGAGACCGCGGGTTCTCACCGCGAAGACATGGTCGG
CGGTGGCCGTGCAAATCTCAGATGTGGACGACGGGCGAGCTCCTGTTCGA
GGGCTGGGGTTCCCCCTCCACCGGAAGGCCTCGCAGCTGACGCCTCTACA
CCATCTCCTGGCGTAGGTTGCGGTGGTAAGCGAAGCCGGAGGAGGTATCC
CCCTGCCGAAGAGAGTGGCGAATGCGAGGAGGTGGAGGGTTCTGGTGCGG
TGGACGCTGGTGTGGGCCTAGGGGAAGCACCGATAGCGATGATGAACCTG
CAGGCCCTCGAGCGATTACTGGGCGCGGAGGGTCCCCCGGATCCATGCCC
GGGAGCTGTTCCACTCGCGTCGGTGGGACTGTCGAAGCTGAAAACTGACG
CAACTAGTGCGCCCCCGGCAGTACTCCGCGTTGCGTTCTTCCCCGTGCGC
GAGCTGCTGGGGCGATGCAGCCGGTCGCTCTTAACACTCGCAGTTCGCCA
GACTAGCGCCCCGGCGGATACAAGCAGCCGGGACGACATCAGTCCTGATG
AGACCGCCGATTGCAGCGGTAACAGCGAGACCAGCACGGCCCATTGGGCG
AAGGCAGGGCTCGACGCGGTTTGCCACGCCCTAGACGCTGCACTTCCGGG
GAAAGAGACCGCGGGTTCTCACCGCGAAGACATGGTCGGCGGTGGCCGTG
CAAATCTCAGATGTGGACGACGGGCGAGCTCCTGTTCGAGGGCTGGGGTT
CCCCCTCCACCGGAAGGCCTCGCAGCTGACGCCTCTACACCATCTCCTGG
CGTAGGTTGCGGTGGTAAGCGAAGCCGGAGGAGGTATCCCCCTGCCGAAG
AGAGTGGCGAATGCGAGGAGGTGGAGGGTTCTGGTGCGGTGGACGCTGGT
GTGGGCCTAGGGGAAGCACCGATAGCGATGATGAACCTGCAGGCCCTCGA
GCGATTACTGGGCGCGGAGGGTCCCCCGGATCCATGCCCGGGAGCTGTTC
CACTCGCGTCGGTGGGACTGTCGAAGCTGAAAACTGACGCAACTAGTGGC
GTTCTTGACGAGGTATCCGAGGACTGTGGCGCGTGGGAGTTGGTGGAGGG
ATGGACGCCGTGTGCCATAGGCACGTTGCCAGGATGGTCCGGTGCGCGCC
TTGGGACGGAGCTTTAGGCGTTCTTGACGAGGTATCCGAGGACTGTGGCG
CGTGGGAGTTGGTGGAGGGATGGACGCCGTGTGCCATAGGCACGTTGCCA
GGATGGTCCGGTGCGCGCCTTGGGACGGAGCTTTAG
back to top