prot_S-dermatodea_contig8423.16592.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig8423.16592.1
Unique Nameprot_S-dermatodea_contig8423.16592.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length236
Homology
BLAST of mRNA_S-dermatodea_contig8423.16592.1 vs. uniprot
Match: D7FTB4_ECTSI (Pyridine nucleotide-disulfide oxidoreductase domain-containing protein 1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTB4_ECTSI)

HSP 1 Score: 423 bits (1088), Expect = 1.020e-138
Identity = 210/236 (88.98%), Postives = 219/236 (92.80%), Query Frame = 0
Query:    1 MQHVVDTYQDEWATVVNDEERRKAFRQFVNSDHTERGIPFIAMRGQQRPMDWPKDEFIPDLHEEGSKPHQILSGESSWVQVGSVSDFPADGGAAVLYGKSQLAVYNVVRRNEWYATQNVCPHKRALVLSEGIVGSRDGILKVACPLHKNNFDLKSGECLDHMEDENMKLLTFPVKVEDGSVFLDLPPISELDQLLATEKVMLSADCFNGSENNFVSVGADELPVAAAAQD-AEVSA 235
            MQHVVDTYQDEWATVVNDEERRKAFRQFVNSDHTERGIPFIAMRGQ RPMDWPKDEFIPDLHEEGSKP Q+L+G SSWV+VGSVSDFP +GGAAVLYGKSQLAVYNV RRNEWYATQNVCPHKRALVLSEGIVGSR+GILKVACPLHKNNFDLKSGECLDHMED+NM+LLTFPVKVEDG VFLDLPP +ELDQLLATEKVMLSADCF GSENNFV V  + LP A   QD AEVSA
Sbjct:  802 MQHVVDTYQDEWATVVNDEERRKAFRQFVNSDHTERGIPFIAMRGQSRPMDWPKDEFIPDLHEEGSKPDQVLTGASSWVRVGSVSDFPTNGGAAVLYGKSQLAVYNVARRNEWYATQNVCPHKRALVLSEGIVGSREGILKVACPLHKNNFDLKSGECLDHMEDDNMRLLTFPVKVEDGGVFLDLPPTAELDQLLATEKVMLSADCFQGSENNFVPVQTNALPTAP--QDTAEVSA 1035          
BLAST of mRNA_S-dermatodea_contig8423.16592.1 vs. uniprot
Match: A0A835YW55_9STRA (Pyridine nucleotide-disulfide oxidoreductase domain-containing protein 1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YW55_9STRA)

HSP 1 Score: 254 bits (648), Expect = 9.020e-75
Identity = 127/210 (60.48%), Postives = 155/210 (73.81%), Query Frame = 0
Query:    1 MQHVVDTYQDEWATVVNDEERRKAFRQFVNSDHTERGIPFIAMRGQQRPMDWPKDEFIPDLHEEGSKPHQILSGE----SSWVQVGSVSDFPADGGAAVLYGKSQLAVYNVVRRNEWYATQNVCPHKRALVLSEGIVGSRDGILKVACPLHKNNFDLKSGECLDHMEDENMKLLTFPVKVEDGSVFLDLPPISELDQLLATEKVMLSADC 206
            MQ +VDTYQDEWA+VV D E+RK+FRQFVN+D  ERGI  I  R Q RP+DWP+D          SKP    +G     ++WV++G V DFP DGGA V YG+SQLAVY    RNEWYATQNVCPHKRALVLS+GI+GS++GI KVACPLHK NF L++G CLD   D+ M ++TFPVKVE+G+V+L LPP SELD +L T+ V+  ADC
Sbjct:  799 MQFIVDTYQDEWASVVKDPEQRKSFRQFVNTDEVERGIGMIPDREQFRPIDWPRD----------SKPLDFGAGAVPAGTTWVKMGVVDDFPVDGGATVKYGESQLAVYRFESRNEWYATQNVCPHKRALVLSQGIIGSKNGIPKVACPLHKKNFSLQTGACLD---DDEMSVMTFPVKVEEGAVYLQLPPTSELDSVLGTKSVIFGADC 995          
BLAST of mRNA_S-dermatodea_contig8423.16592.1 vs. uniprot
Match: A0A257WJA4_9BURK (Nitrite reductase (NAD(P)H) small subunit n=1 Tax=Burkholderiales bacterium 12-64-5 TaxID=1970494 RepID=A0A257WJA4_9BURK)

HSP 1 Score: 215 bits (548), Expect = 3.710e-67
Identity = 116/222 (52.25%), Postives = 147/222 (66.22%), Query Frame = 0
Query:    1 MQHVVDTYQDEWATVVNDEERRKAFRQFVNSDHTERGIPFIAMRGQQRPMDWPKDEFIPDLH---EEGSKPHQILSGES---SWVQVGSVSDFPADGGAAVLYGKSQLAVYNVVRRNEWYATQNVCPHKRALVLSEGIVGSRDGILKVACPLHKNNFDLKSGECLDHMEDENMKLLTFPVKVEDGSVFLDLPPISELDQLLATEKVMLSADCFNGSENNFVS 216
            MQ VVDTY+ EW  VV D E+R+ F+QFVN+D TE  I F++ RGQQRP+DWPKD  +P        G++  +I        +W +VG V+DFP DG A V YGK Q+AVYN   R EW+ATQN+CPHK+A VLS GIVG + G  KVACPLHK NF LKSG CL     E+ +L TFPV++E+ SV+L +PP++ELD  LAT       D  NG  +N V+
Sbjct:    1 MQFVVDTYRCEWRDVVEDPEKRRLFKQFVNTDETEPCIEFVSERGQQRPVDWPKD-VVPTAELTLPNGTRIAEIPETSPDARTWFKVGRVTDFPEDGAATVKYGKVQIAVYNFTSRGEWFATQNMCPHKQAFVLSRGIVGDQQGEPKVACPLHKKNFSLKSGACLSG---EDYQLETFPVRIENESVYLLVPPVAELDDRLATTH-FCHTDSANGCHHNPVT 217          
BLAST of mRNA_S-dermatodea_contig8423.16592.1 vs. uniprot
Match: A0A5C5X7K4_9PLAN (Nitrite reductase [NAD(P)H] n=1 Tax=Thalassoglobus neptunius TaxID=1938619 RepID=A0A5C5X7K4_9PLAN)

HSP 1 Score: 215 bits (548), Expect = 8.460e-65
Identity = 111/209 (53.11%), Postives = 137/209 (65.55%), Query Frame = 0
Query:    1 MQHVVDTYQDEWATVVNDEERRKAFRQFVNSDHTERGIPFIAMRGQQRPMDWPKD-----------EFIPDLHEEGSKPHQILSGESSWVQVGSVSDFPADGGAAVLYGKSQLAVYNVVRRNEWYATQNVCPHKRALVLSEGIVGSRDGILKVACPLHKNNFDLKSGECLDHMEDENMKLLTFPVKVEDGSVFLDLPPISELDQLLATE 198
            ++H++ TYQ EW TVV D E+RK FRQFVN+D  E  I  ++ RGQ RP DWP +           E    L E  +KP      E+ W QVG+V DFP DGGA + YGKSQ+AV+    R EWYA+QN+CPHK+A VLS GIVG   G  KVACPLHK  F L+SGE L   + E+  + TFPVKVEDG+V+L+LPP   LD+LLATE
Sbjct:  179 IEHLIATYQCEWTTVVKDPEKRKRFRQFVNTDEEESCIEIVSERGQTRPADWPGELVSLEQFQTLEEHQHHLEESATKP------ETRWTQVGTVDDFPVDGGATIKYGKSQIAVFRFESRGEWYASQNMCPHKKAFVLSRGIVGDEAGTPKVACPLHKKTFSLESGESL---QGEDYHITTFPVKVEDGNVYLNLPPTEVLDELLATE 378          
BLAST of mRNA_S-dermatodea_contig8423.16592.1 vs. uniprot
Match: A0A2H5ZGD8_9BACT (Nitrite reductase [NAD(P)H] n=1 Tax=bacterium HR30 TaxID=2035425 RepID=A0A2H5ZGD8_9BACT)

HSP 1 Score: 213 bits (542), Expect = 2.990e-63
Identity = 105/207 (50.72%), Postives = 140/207 (67.63%), Query Frame = 0
Query:    1 MQHVVDTYQDEWATVVNDEERRKAFRQFVNSDHTERGIPFIAMRGQQRPMDWPKDEFIP---DLHEEGSKP--HQILSGESSWVQVGSVSDFPADGGAAVLYGKSQLAVYNVVRRNEWYATQNVCPHKRALVLSEGIVGSRDGILKVACPLHKNNFDLKSGECLDHMEDENMKLLTFPVKVEDGSVFLDLPPISELDQLLATEKVML 202
            MQ +V++Y+ EW  VV + ERR+ FRQFVN+   + GI  I  RGQ+RP+DWP D  +P   ++H    +   H + +G   WV+VG V DFPADG   VLYG++Q+AVY    R+EWYATQN+CPHKRALVL+ G++G  DG+  +ACPLHK  F L +G CL     E + L TFPV+V DG+V+L LPP   LD+ LAT++V L
Sbjct:  254 MQRLVESYRCEWTEVVRNPERRRWFRQFVNTQKVQPGIGLIQERGQRRPVDWPADASLPPPEEMHLSNGETLAHALRNGSRRWVRVGRVEDFPADGAGVVLYGRTQIAVYRFASRDEWYATQNICPHKRALVLARGLLGDHDGVPTIACPLHKKLFALTTGRCLSG---EPLTLATFPVEVRDGAVWLHLPPEELLDEALATDRVAL 457          
BLAST of mRNA_S-dermatodea_contig8423.16592.1 vs. uniprot
Match: A0A6N9CBF1_9BACT (Nitrite reductase small subunit NirD n=1 Tax=Candidatus Poribacteria bacterium TaxID=2026781 RepID=A0A6N9CBF1_9BACT)

HSP 1 Score: 217 bits (552), Expect = 2.480e-61
Identity = 117/227 (51.54%), Postives = 148/227 (65.20%), Query Frame = 0
Query:    1 MQHVVDTYQDEWATVVNDEERRKAFRQFVNSDHTERGIPFIAMRGQQRPMDWPKDEF-IPDLHEEGSKPHQIL--SGESSWVQVGSVSDFPADGGAAVLYGKSQLAVYNVVRRNEWYATQNVCPHKRALVLSEGIVGSRDGILKVACPLHKNNFDLKSGECLDHMEDENMKLLTFPVKVEDGSVFLDLPPISELDQLLATEKVMLSADCFNGSENNFVSVGADELPV 224
            M+H+VDTY+ EW  VV + E RK FRQF+N+D TE GI F++ RGQQRP  W KD   I D+    S   + L  S +  WV+VGSVSDFP DGGAA+ YGK+Q+AV+N   R EWYATQN+CPHK+A VLS GI+G   G  K+ACPLHK  F L+SG CL     E+ ++LTFPVKV+D  V+L+LP   ELD  L+TE    +     G E      GA + P+
Sbjct:  791 MEHLVDTYKCEWREVVMNPEIRKKFRQFINTDATETGIEFVSERGQQRPKYWEKDLIPIEDVTLPSSAKLKALRESPDKQWVKVGSVSDFPYDGGAAIKYGKTQIAVFNFFSRGEWYATQNMCPHKKAFVLSRGIIGDAQGAPKIACPLHKKTFCLESGACLSG---EDYEVLTFPVKVKDNDVYLELPAQDELDATLSTENFCNTGTLPRGPEK-----GASKDPI 1009          
BLAST of mRNA_S-dermatodea_contig8423.16592.1 vs. uniprot
Match: A0A6U3NRT0_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3NRT0_9STRA)

HSP 1 Score: 205 bits (522), Expect = 1.000e-60
Identity = 106/212 (50.00%), Postives = 137/212 (64.62%), Query Frame = 0
Query:    1 MQHVVDTYQDEWATVVNDEERRKAFRQFVNSDHT---ERGIPFIAMRGQQRPMDWPKDEFIPDLHEEGSKPHQILSGESSWVQVGSVSDFPADGGAAVLYGKSQLAVYNVVRRNEWYATQNVCPHKRALVLSEGIVGSRDGILKVACPLHKNNFDLKSGECLDHMEDENMKLLTFPVKVEDGSVFLDLPPISELDQLLATEKVMLS-ADCFN 208
            MQH+VDTY DEWA VV D  RR  F+QFVNSD     E+ I FI  RGQ RP DWP D   P  + +          E SWV+VG+ SDF  + G+ +LYG SQLAV+N   R EWY TQN+CPHK+A VLS+GI+GS +G  KVACPLHK  F L+ G    H  D ++KL+TFPVK+E   V ++LP + E+D +L T  + ++ +DC +
Sbjct:  186 MQHLVDTYHDEWAEVVKDPVRRAKFKQFVNSDENIPREKMIEFIDQRGQLRPTDWPADGQ-PQTNWQAPSDDVFARSEKSWVKVGTTSDFDPNVGSPILYGDSQLAVFNNAHRGEWYCTQNMCPHKQAFVLSQGIIGSFEGAPKVACPLHKKQFSLEDG----HQFDGDLKLITFPVKIEGDDVMVELPAVEEVDAILGTNGLRVTKSDCID 392          
BLAST of mRNA_S-dermatodea_contig8423.16592.1 vs. uniprot
Match: A0A7C7S2M9_9BACT (Nitrite reductase small subunit NirD n=1 Tax=Nitrospira sp. TaxID=70125 RepID=A0A7C7S2M9_9BACT)

HSP 1 Score: 212 bits (539), Expect = 1.320e-59
Identity = 110/202 (54.46%), Postives = 134/202 (66.34%), Query Frame = 0
Query:    1 MQHVVDTYQDEWATVVNDEERRKAFRQFVNSDHTERGIPFIAMRGQQRPMDWPKD----EFIPDLHEEGSKPHQILSGESSWVQVGSVSDFPADGGAAVLYGKSQLAVYNVVRRNEWYATQNVCPHKRALVLSEGIVGSRDGILKVACPLHKNNFDLKSGECLDHMEDENMKLLTFPVKVEDGSVFLDLPPISELDQLLATE 198
            MQ++VDTY+ EW  VVND ERRKAFRQFVN+D TE  +  I+ RGQQRP DWP +    E    L +   +   +   +S+WV+VG VSDFP +GGA +  GK Q+AV+N   R +WYA Q +CPHK+A VLS GI+G   G  KVACPLHK NF L SGE L+    E   +  F VKVE   VFLDLPPI  LDQ+LATE
Sbjct:  789 MQYLVDTYKCEWTEVVNDPERRKAFRQFVNTDETESSLEIISERGQQRPADWPSESVSLEQFKLLQQRLPEADLVQENQSAWVKVGIVSDFPTNGGATIKVGKVQIAVFNFESRGKWYACQQMCPHKKAFVLSRGIIGDVQGTPKVACPLHKKNFSLASGESLNG---EAYAIRVFQVKVEGEEVFLDLPPIEVLDQILATE 987          
BLAST of mRNA_S-dermatodea_contig8423.16592.1 vs. uniprot
Match: A0A354GZY4_9BACT (Nitrite reductase (NAD(P)H) small subunit (Fragment) n=1 Tax=Planctomycetales bacterium TaxID=2053591 RepID=A0A354GZY4_9BACT)

HSP 1 Score: 210 bits (534), Expect = 2.480e-59
Identity = 109/202 (53.96%), Postives = 136/202 (67.33%), Query Frame = 0
Query:    1 MQHVVDTYQDEWATVVNDEERRKAFRQFVNSDHTERGIPFIAMRGQQRPMDWPKDEFIP--DLHEEGSKPH-QILSGESSWVQVGSVSDFPADGGAAVLYGKSQLAVYNVVRRNEWYATQNVCPHKRALVLSEGIVGSRDGILKVACPLHKNNFDLKSGECLDHMEDENMKLLTFPVKVEDGSVFLDLPPISELDQLLATEK 199
            MQ++VDTY+ EW  VVND ERRK F+QFVN+D TE  I F+  R QQRP DW    FIP  +L   G     + +  +  WV VG V +FP DGGA + YG++Q+AV+N   R EWYATQN+CPH+R  VLS G++G  +G  KVACP+HK NF L+SG+C   M  E+  L  FPVKVE   V+L LPP+ ELD LLATEK
Sbjct:  626 MQYLVDTYKCEWKEVVNDPERRKFFKQFVNTDETEPTIEFVKQREQQRPADW-TTHFIPVSELTVRGDMAAPEPVEPDLRWVPVGKVWNFPHDGGATIKYGRTQIAVFNFASRGEWYATQNMCPHRREFVLSRGMIGDVNGKPKVACPVHKKNFSLESGKC---MSGEDYSLQVFPVKVEGDDVYLQLPPVEELDALLATEK 823          
BLAST of mRNA_S-dermatodea_contig8423.16592.1 vs. uniprot
Match: A0A2E3Z7Y8_9PLAN (Nitrite reductase (NAD(P)H) small subunit n=2 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A2E3Z7Y8_9PLAN)

HSP 1 Score: 211 bits (537), Expect = 2.570e-59
Identity = 108/203 (53.20%), Postives = 138/203 (67.98%), Query Frame = 0
Query:    1 MQHVVDTYQDEWATVVNDEERRKAFRQFVNSDHTERGIPFIAMRGQQRPMDWPKDEFIPDLH------EEGSKPHQILSGESSWVQVGSVSDFPADGGAAVLYGKSQLAVYNVVRRNEWYATQNVCPHKRALVLSEGIVGSRDGILKVACPLHKNNFDLKSGECLDHMEDENMKLLTFPVKVEDGSVFLDLPPISELDQLLAT 197
            MQH+VDTY  EW  VV+D E+RK +RQF+N++ TE  I FI  RGQQRP +W K+E +  +        +  K HQ    +  WV+VG V DFP DGGAA+ YG  Q+AV+N   R EWYA QN+CPHK A VLS GI+G++D   KVACPLHK  F LKSGECL   ED ++K+  FPVK++   V+++LPP S+LD LLAT
Sbjct:  784 MQHLVDTYLCEWKAVVDDPEKRKLYRQFINTEETEPSIEFIDERGQQRPANWSKNEELVQIQMPNKTTPKNGKLHQHEKPKPEWVEVGKVKDFPQDGGAAIKYGDVQIAVFNFSSRGEWYACQNMCPHKNAFVLSRGILGNKDSAPKVACPLHKKPFSLKSGECLSG-EDYSVKV--FPVKLDGERVYVELPPKSQLDALLAT 983          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig8423.16592.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FTB4_ECTSI1.020e-13888.98Pyridine nucleotide-disulfide oxidoreductase domai... [more]
A0A835YW55_9STRA9.020e-7560.48Pyridine nucleotide-disulfide oxidoreductase domai... [more]
A0A257WJA4_9BURK3.710e-6752.25Nitrite reductase (NAD(P)H) small subunit n=1 Tax=... [more]
A0A5C5X7K4_9PLAN8.460e-6553.11Nitrite reductase [NAD(P)H] n=1 Tax=Thalassoglobus... [more]
A0A2H5ZGD8_9BACT2.990e-6350.72Nitrite reductase [NAD(P)H] n=1 Tax=bacterium HR30... [more]
A0A6N9CBF1_9BACT2.480e-6151.54Nitrite reductase small subunit NirD n=1 Tax=Candi... [more]
A0A6U3NRT0_9STRA1.000e-6050.00Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A7C7S2M9_9BACT1.320e-5954.46Nitrite reductase small subunit NirD n=1 Tax=Nitro... [more]
A0A354GZY4_9BACT2.480e-5953.96Nitrite reductase (NAD(P)H) small subunit (Fragmen... [more]
A0A2E3Z7Y8_9PLAN2.570e-5953.20Nitrite reductase (NAD(P)H) small subunit n=2 Tax=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012748Rieske-like [2Fe-2S] domain, NirD-typePFAMPF13806Rieske_2coord: 77..182
e-value: 2.2E-26
score: 91.8
IPR012748Rieske-like [2Fe-2S] domain, NirD-typeTIGRFAMTIGR02378TIGR02378coord: 77..183
e-value: 8.0E-33
score: 110.7
IPR036922Rieske [2Fe-2S] iron-sulphur domain superfamilyGENE3D2.102.10.10coord: 70..185
e-value: 3.9E-34
score: 119.1
IPR036922Rieske [2Fe-2S] iron-sulphur domain superfamilySUPERFAMILY50022ISP domaincoord: 76..195
NoneNo IPR availablePANTHERPTHR43809FAMILY NOT NAMEDcoord: 1..199
IPR017941Rieske [2Fe-2S] iron-sulphur domainPROSITEPS51296RIESKEcoord: 78..183
score: 18.243

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig8423contigS-dermatodea_contig8423:3247..8366 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig8423.16592.1mRNA_S-dermatodea_contig8423.16592.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig8423 2426..8435 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig8423.16592.1 ID=prot_S-dermatodea_contig8423.16592.1|Name=mRNA_S-dermatodea_contig8423.16592.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=236bp
MQHVVDTYQDEWATVVNDEERRKAFRQFVNSDHTERGIPFIAMRGQQRPM
DWPKDEFIPDLHEEGSKPHQILSGESSWVQVGSVSDFPADGGAAVLYGKS
QLAVYNVVRRNEWYATQNVCPHKRALVLSEGIVGSRDGILKVACPLHKNN
FDLKSGECLDHMEDENMKLLTFPVKVEDGSVFLDLPPISELDQLLATEKV
MLSADCFNGSENNFVSVGADELPVAAAAQDAEVSA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012748Rieske-like_NirD
IPR036922Rieske_2Fe-2S_sf
IPR017941Rieske_2Fe-2S