prot_S-dermatodea_contig8422.16589.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig8422.16589.1
Unique Nameprot_S-dermatodea_contig8422.16589.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length164
Homology
BLAST of mRNA_S-dermatodea_contig8422.16589.1 vs. uniprot
Match: D7G9D8_ECTSI (MutL protein homolog 3 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9D8_ECTSI)

HSP 1 Score: 230 bits (586), Expect = 7.420e-67
Identity = 114/167 (68.26%), Postives = 137/167 (82.04%), Query Frame = 0
Query:    1 GAVAVTVSSGELGQARVIGQAGRKFILLRAGTGGILCVDQHAADERIKLEELERQVFGTERDRRNIDRLVLTPPESLPITASDGELLEQHRKVLSSWRFDFELTHGSRGG---APSATLLSVPIVCGVRMSVQDLMSFLNYLRESVEPGSSARWVRPPQVQHILNYK 164
            GAVAVTV+  EL +A +IGQAGRKFILLRA TG +LC+DQHAADER+KLEELERQVFG  R+RRN++RL+L PPE L IT SD ELLE+HR+VLSSW+F+  +    +GG    P  TL +VP+VCGVR+SVQD + FL++LRESVEPG SAR +RPPQVQHILNYK
Sbjct: 1389 GAVAVTVTPEELSEALLIGQAGRKFILLRAKTGAVLCLDQHAADERVKLEELERQVFGEGRERRNVERLLLDPPEKLSITRSDAELLEEHREVLSSWQFEVRVDQAQQGGDGLTPVVTLTAVPMVCGVRLSVQDFVGFLHFLRESVEPGQSARRLRPPQVQHILNYK 1555          
BLAST of mRNA_S-dermatodea_contig8422.16589.1 vs. uniprot
Match: A0A6H5JXH6_9PHAE (MutL_C domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXH6_9PHAE)

HSP 1 Score: 154 bits (389), Expect = 1.530e-44
Identity = 73/113 (64.60%), Postives = 90/113 (79.65%), Query Frame = 0
Query:   55 QVFGTERDRRNIDRLVLTPPESLPITASDGELLEQHRKVLSSWRFDFELTHGSRGG---APSATLLSVPIVCGVRMSVQDLMSFLNYLRESVEPGSSARWVRPPQVQHILNYK 164
            +VFG  R+RRN++RL+L PPE L IT SD ELLE+HR+VLSSWRF+  +  G +GG    P  TL +VP+VCGVR+SVQD + FL++LRESVEPG SAR +RPPQVQHILNYK
Sbjct:   15 KVFGETRERRNVERLLLDPPEKLSITRSDAELLEEHREVLSSWRFEVRVDQGQQGGDGLTPVVTLTAVPMVCGVRLSVQDFVGFLHFLRESVEPGQSARRLRPPQVQHILNYK 127          
BLAST of mRNA_S-dermatodea_contig8422.16589.1 vs. uniprot
Match: A0A7S3YN81_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YN81_HETAK)

HSP 1 Score: 91.3 bits (225), Expect = 2.560e-19
Identity = 55/174 (31.61%), Postives = 90/174 (51.72%), Query Frame = 0
Query:    3 VAVTVSSGELGQARVIGQAGRKFILLRA------------GTGG-----------------ILCVDQHAADERIKLEELERQVFGTERDRRNIDRLVLTPPESLPITASDGELLEQHRKVLSSWRFDFELTHGSR-----GGAPSATLLSVPIVCGVRMSVQDLMSFLNYLRES 142
            +   +S+ +L  A +IGQ  RKFIL R             GTGG                 +L VDQHAADER++LE LE Q++G  R  +++ ++ ++P + + ++ ++ ++ + +++ L+SW F F   H S      GG    TL ++P V GVR++  DL   L  L E+
Sbjct:   85 IPTNLSAKDLSNAAIIGQLDRKFILCRVSSADGGDERLPTGTGGQSGSGSGGRGKVSRGGLLLAVDQHAADERVRLEALEAQIYGASRTEKHVRKVKISPTKKIRVSCNEADVADSYKEELASWGFCFNRCHESSEATTMGGHEWLTLTALPEVLGVRLAPADLQDLLARLVEA 258          
BLAST of mRNA_S-dermatodea_contig8422.16589.1 vs. uniprot
Match: A0A833WJM2_PHYIN (MutL C terminal dimerization domain n=1 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833WJM2_PHYIN)

HSP 1 Score: 87.8 bits (216), Expect = 4.000e-17
Identity = 54/173 (31.21%), Postives = 86/173 (49.71%), Query Frame = 0
Query:    5 VTVSSGELGQARVIGQAGRKFILLRAGTGG---ILCVDQHAADERIKLEELERQVFGTERDRRNIDRLVLTPPESLPITASDGELLEQHRKVLSSWRFDFELTHGSRGGA------------PSATLLSVPIVCGVRMSVQDLMSFLNYLRESVEPGSSARWVRPPQVQHILN 162
            + +S   L + +VI Q  RKF+L++A T     +LC+DQHAADER++LE+LE ++FG +   R +D     PP  L +   + E+L Q+  ++ SW FDFELT                       L + P V     +  D   F+  L  + E    ++ +RPP +  +L+
Sbjct:  691 IKISKSTLAKLQVIRQVDRKFVLVQADTPQGKLVLCIDQHAADERVRLEQLEEEMFGHDGSLRRVDIQEHEPPIVLRVNFKEREVLSQYDDLIRSWGFDFELTVSEPESVFCVRTEHEPDDRNRVLLYATPKVEKRAANADDFREFIQVLANAGETYQHSQ-IRPPVITRLLH 862          
BLAST of mRNA_S-dermatodea_contig8422.16589.1 vs. uniprot
Match: W2G1M6_PHYPR (MutL_C domain-containing protein n=2 Tax=Phytophthora parasitica TaxID=4792 RepID=W2G1M6_PHYPR)

HSP 1 Score: 87.0 bits (214), Expect = 4.550e-17
Identity = 55/173 (31.79%), Postives = 90/173 (52.02%), Query Frame = 0
Query:    5 VTVSSGELGQARVIGQAGRKFILLRAGTGG---ILCVDQHAADERIKLEELERQVFGTERDRRNIDRLVLTPPESLPITASDGELLEQHRKVLSSWRFDFE---------LTHGSRGGAPSAT---LLSVPIVCGVRMSVQDLMSFLNYLRESVEPGSSARWVRPPQVQHILN 162
            + VS   L + +V+ Q  RKFIL++A T     +LC+DQHAADERI+LE+LE ++FG +   R ++     PP  L +   + E+L+Q+  ++ SW FDFE         ++   +      T   L + P V     +  D   F+  L  + E  S ++ +RPP +  +L+
Sbjct:  180 IKVSKSTLAKLQVVRQVDRKFILVQADTSRGKLVLCIDQHAADERIRLEQLEEEMFGRDGSLRRVEIQKHGPPLVLRVNFKEREVLKQYEGLIKSWGFDFESVTSEPELFISMHRKSELDDKTRVLLYATPKVEKRAANADDFREFIQLLASAGETYSHSQ-IRPPVITRLLH 351          
BLAST of mRNA_S-dermatodea_contig8422.16589.1 vs. uniprot
Match: W2R2C9_PHYPN (MutL_C domain-containing protein n=7 Tax=Phytophthora TaxID=4783 RepID=W2R2C9_PHYPN)

HSP 1 Score: 87.0 bits (214), Expect = 7.410e-17
Identity = 55/173 (31.79%), Postives = 90/173 (52.02%), Query Frame = 0
Query:    5 VTVSSGELGQARVIGQAGRKFILLRAGTGG---ILCVDQHAADERIKLEELERQVFGTERDRRNIDRLVLTPPESLPITASDGELLEQHRKVLSSWRFDFE---------LTHGSRGGAPSAT---LLSVPIVCGVRMSVQDLMSFLNYLRESVEPGSSARWVRPPQVQHILN 162
            + VS   L + +V+ Q  RKFIL++A T     +LC+DQHAADERI+LE+LE ++FG +   R ++     PP  L +   + E+L+Q+  ++ SW FDFE         ++   +      T   L + P V     +  D   F+  L  + E  S ++ +RPP +  +L+
Sbjct:  669 IKVSKSTLAKLQVVRQVDRKFILVQADTSRGKLVLCIDQHAADERIRLEQLEEEMFGRDGSLRRVEIQKHGPPLVLRVNFKEREVLKQYEGLIKSWGFDFESVTSEPELFISMHRKSELDDKTRVLLYATPKVEKRAANADDFREFIQLLASAGETYSHSQ-IRPPVITRLLH 840          
BLAST of mRNA_S-dermatodea_contig8422.16589.1 vs. uniprot
Match: A0A7S4ULW0_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Paramoeba aestuarina TaxID=180227 RepID=A0A7S4ULW0_9EUKA)

HSP 1 Score: 82.4 bits (202), Expect = 7.550e-16
Identity = 55/159 (34.59%), Postives = 81/159 (50.94%), Query Frame = 0
Query:    6 TVSSGELGQARVIGQAGRKFILLRAGTGGILCVDQHAADERIKLEELERQVFGTERDRRNIDRLVLTPPESLPITASDGELLEQHRKVLSSWRFDFELTHGSRGGAPSATLLSVPIVCGVRMSVQDLMSFLNYLRESVEPGSSARWVRPPQVQHILNYK 164
            T++   L    VI Q  +KF+L + G   +L VDQHAADER++ E+LE Q+FG    +RN+    L+   SL +   +  LLE+ R  L SW + F     +       +L SVP V  V +  QD   FL      +E    +R++RP ++  IL  K
Sbjct:   82 TLTKEMLKSVEVINQMDQKFLLCKIGDI-LLAVDQHAADERVRYEKLEDQIFGECGQKRNLQVEFLSHSISLDMNEHERYLLERFRACLESWGWSFSDLQSN------VSLFSVPKVMNVVLDHQD---FLKQFLSELEQSGGSRYLRPQKITKILQSK 230          
BLAST of mRNA_S-dermatodea_contig8422.16589.1 vs. uniprot
Match: A0A662XGW8_9STRA (MutL_C domain-containing protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XGW8_9STRA)

HSP 1 Score: 81.6 bits (200), Expect = 9.030e-16
Identity = 61/176 (34.66%), Postives = 84/176 (47.73%), Query Frame = 0
Query:    5 VTVSSGELGQARVIGQAGRKFILLRAGTGG---ILCVDQHAADERIKLEELERQVFGTERDRRNIDRLVLTPPESLPITASDGELLEQHRKVLSSWRFDFELT--HG-----SRGGAPSAT------LLSVPIVCGVRMSVQDLMSFLNYLRESVEPG--SSARWVRPPQVQHILN 162
            V +S   L   +VI Q  RKFIL +A T     +LC+DQHAADER++LE LE  VFG +  +RN+D     PP  L + A + E L  +  ++ SW FDFE    H      S    P         L S P    V   + +   F  +LR     G  S   ++RPP +  +L+
Sbjct:   19 VKISKSVLATLQVIRQVDRKFILAKASTPRGSLLLCIDQHAADERVRLESLEAAVFGPDGSQRNVDFHEHEPPLILLMNAKERETLWGNEDLVRSWGFDFECVSCHSESSFLSDPNTPEQNREGHVLLHSTP---KVEKRIANADDFREFLRHIACTGGYSGYSYIRPPVITRLLH 191          
BLAST of mRNA_S-dermatodea_contig8422.16589.1 vs. uniprot
Match: A0A662X288_9STRA (MutL_C domain-containing protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662X288_9STRA)

HSP 1 Score: 83.2 bits (204), Expect = 1.380e-15
Identity = 58/176 (32.95%), Postives = 82/176 (46.59%), Query Frame = 0
Query:    5 VTVSSGELGQARVIGQAGRKFILLRAGTGG---ILCVDQHAADERIKLEELERQVFGTERDRRNIDRLVLTPPESLPITASDGELLEQHRKVLSSWRFDFELTHGS-------------RGGAPSATLLSVPIVCGVRMSVQDLMSFLNYLRESVEPG--SSARWVRPPQVQHILN 162
            V +S   L   +VI Q  RKFIL++A T     +LC+DQHAADER++LE LE  VFG +  +RN+D     P   L + A + E L  +  ++ SW FDFE                  + G     L S P    V   + +   F  +LR     G  S    +RPP +  +L+
Sbjct:  253 VKISKSVLATLQVIRQVDRKFILVKASTPRGSLLLCIDQHAADERVRLESLEAAVFGPDGSQRNVDFHEHQPALILLMNAKERETLWGNEDLVRSWGFDFECVSSQSENSFLSDRKTPEKNGEGHVLLHSTP---KVEKRIANADDFREFLRHIAGTGGYSGCSHIRPPVITRLLH 425          
BLAST of mRNA_S-dermatodea_contig8422.16589.1 vs. uniprot
Match: A0A8K1CMV7_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CMV7_PYTOL)

HSP 1 Score: 83.2 bits (204), Expect = 1.630e-15
Identity = 55/162 (33.95%), Postives = 77/162 (47.53%), Query Frame = 0
Query:   12 LGQARVIGQAGRKFILLRAGT-----------GGILCVDQHAADERIKLEELERQVFGTERDRRNIDRLVLTPPESLPITASDGELLEQHRKVLSSWRFDFELTHGSRGGAPSATLLSVPIVCGVRMSVQDLMSFLNYLRESVEPGSSARWVRPPQVQHILN 162
            L +  VI Q  RKFIL +              G ILC+DQHAADERI+LE LE  VFG+  D RN+D +    P  L + A + + L Q+ + + SW F+F++      G     L   P +        DL  +L  L  S+   S    +RPP +   L+
Sbjct:  739 LSRLEVIKQVDRKFILAKVFNSDGHDDQSDEKGLILCIDQHAADERIRLEALEASVFGSLGDERNVDVMEHPEPLCLNVNAQEHDTLVQYEEEIRSWGFEFDIN-----GHEQIWLSHTPKIDSRIAQPDDLREYLQLL-SSLRGASVGNTLRPPVITRFLH 894          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig8422.16589.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G9D8_ECTSI7.420e-6768.26MutL protein homolog 3 n=1 Tax=Ectocarpus siliculo... [more]
A0A6H5JXH6_9PHAE1.530e-4464.60MutL_C domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A7S3YN81_HETAK2.560e-1931.61Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A833WJM2_PHYIN4.000e-1731.21MutL C terminal dimerization domain n=1 Tax=Phytop... [more]
W2G1M6_PHYPR4.550e-1731.79MutL_C domain-containing protein n=2 Tax=Phytophth... [more]
W2R2C9_PHYPN7.410e-1731.79MutL_C domain-containing protein n=7 Tax=Phytophth... [more]
A0A7S4ULW0_9EUKA7.550e-1634.59Hypothetical protein (Fragment) n=1 Tax=Paramoeba ... [more]
A0A662XGW8_9STRA9.030e-1634.66MutL_C domain-containing protein n=1 Tax=Nothophyt... [more]
A0A662X288_9STRA1.380e-1532.95MutL_C domain-containing protein n=1 Tax=Nothophyt... [more]
A0A8K1CMV7_PYTOL1.630e-1533.95Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 42..69
IPR014790MutL, C-terminal, dimerisationSMARTSM00853MutL_C_2coord: 17..155
e-value: 2.6E-9
score: 46.9
IPR014790MutL, C-terminal, dimerisationPFAMPF08676MutL_Ccoord: 16..143
e-value: 9.8E-13
score: 48.1
IPR042120MutL, C-terminal domain, dimerisation subdomainGENE3D2.30.42.20coord: 8..81
e-value: 6.5E-8
score: 34.3
IPR038973DNA mismatch repair protein MutL/Mlh/PmsPANTHERPTHR10073DNA MISMATCH REPAIR PROTEIN MLH, PMS, MUTLcoord: 10..164
IPR028830DNA mismatch repair protein Mlh3PANTHERPTHR10073:SF47DNA MISMATCH REPAIR PROTEIN MLH3coord: 10..164
IPR037198MutL, C-terminal domain superfamilySUPERFAMILY118116DNA mismatch repair protein MutLcoord: 14..145

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig8422contigS-dermatodea_contig8422:2867..5603 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig8422.16589.1mRNA_S-dermatodea_contig8422.16589.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig8422 2866..5603 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig8422.16589.1 ID=prot_S-dermatodea_contig8422.16589.1|Name=mRNA_S-dermatodea_contig8422.16589.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=164bp
GAVAVTVSSGELGQARVIGQAGRKFILLRAGTGGILCVDQHAADERIKLE
ELERQVFGTERDRRNIDRLVLTPPESLPITASDGELLEQHRKVLSSWRFD
FELTHGSRGGAPSATLLSVPIVCGVRMSVQDLMSFLNYLRESVEPGSSAR
WVRPPQVQHILNYK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR014790MutL_C
IPR042120MutL_C_dimsub
IPR038973MutL/Mlh/Pms
IPR028830Mlh3
IPR037198MutL_C_sf