prot_S-dermatodea_contig8421.16588.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig8421.16588.1
Unique Nameprot_S-dermatodea_contig8421.16588.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length238
Homology
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BLAST of mRNA_S-dermatodea_contig8421.16588.1 vs. uniprot
Match: A0A6H5KU66_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KU66_9PHAE)

HSP 1 Score: 159 bits (402), Expect = 2.680e-41
Identity = 97/181 (53.59%), Postives = 116/181 (64.09%), Query Frame = 0 
Query:   60 LEAQRMRTSRIYCEACPGDGIVEFTANRDMRGGGDSWNGLVTAVAAEYVQELPLGNVIGIEAVVVSDLPGNTGDWQLG----VKASTGGSH---------EGGGYGW--------GNAARCALLMAAATFLEEVLGMRNQFPRMKAMRCYSASLRC---RPTAADKAKRKADNARNNTLQS 216
            +EA+R+RTSR+YCEACP DG+ EF A+ +MRGGG SW GLVTAV AEYV ELP G ++G+EAVVVSD+PGNTG           A++GG           +GG            G AARCAL MA+ATFLEEV+GM   FPRMKAMRC+SASLRC   R  A D        AR+N+  S
Sbjct:  463 MEAERLRTSRVYCEACPDDGVTEFLADGEMRGGGPSWKGLVTAVVAEYVHELPEGALVGMEAVVVSDVPGNTGRRHSAPTDEALATSGGDEKEKAVAAVDDGGDXXXXXXXXXXXGGAARCALAMASATFLEEVMGMGG-FPRMKAMRCFSASLRCGRPRDAAGDYLAPSIVCARSNSSSS 642
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig8421.16588.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KU66_9PHAE2.680e-4153.59Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 43..63

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig8421contigS-dermatodea_contig8421:4390..7809 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig8421.16588.1mRNA_S-dermatodea_contig8421.16588.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig8421 4390..7809 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig8421.16588.1 ID=prot_S-dermatodea_contig8421.16588.1|Name=mRNA_S-dermatodea_contig8421.16588.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=238bp
MPEGSEGRTPRDGAGGTGRVGGGAGRGLGDSQDMDPDEARALAETAQAEA
EILAAAAADLEAQRMRTSRIYCEACPGDGIVEFTANRDMRGGGDSWNGLV
TAVAAEYVQELPLGNVIGIEAVVVSDLPGNTGDWQLGVKASTGGSHEGGG
YGWGNAARCALLMAAATFLEEVLGMRNQFPRMKAMRCYSASLRCRPTAAD
KAKRKADNARNNTLQSGIGGVGAAERAACFIPQEPFRL
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