mRNA_S-dermatodea_contig8416.16585.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-dermatodea_contig8416.16585.1
Unique NamemRNA_S-dermatodea_contig8416.16585.1
TypemRNA
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Homology
[Close]
BLAST of mRNA_S-dermatodea_contig8416.16585.1 vs. uniprot
Match: D8LFF1_ECTSI (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LFF1_ECTSI)

HSP 1 Score: 302 bits (774), Expect = 3.080e-103
Identity = 146/164 (89.02%), Postives = 155/164 (94.51%), Query Frame = 1 
Query:   52 MNAQMNSTFRGAAAQFLSKQHPVTHKQEVCRLYRASLKLLDSWAIDRTVFNDEATAMRKMFDEGSKCEPDSARAKALMRDAYKKVGDYVHVDRYIRPYMPSGSSFMRNPPPPLEACYPLGIPDSVLAEFKGIPMEVEVDMSRPEEGRMSKAGQVLVDLATKRVY 543
            MNAQMNSTFRGAAAQF+SKQHP+THKQEVCRLYRASLKLLDSWAIDRT+F +EAT +R  FDEGSKC PDSARAKALMR AYK + ++VHVDRYIRPYMPSGSSFMRNPPPPLEACYPLGIPD VLAEFKG+PMEVEVDMSRPEEGRMSKAGQVLVDLATKRVY
Sbjct:    1 MNAQMNSTFRGAAAQFISKQHPITHKQEVCRLYRASLKLLDSWAIDRTIFLEEATKVRASFDEGSKCGPDSARAKALMRGAYKMIDEHVHVDRYIRPYMPSGSSFMRNPPPPLEACYPLGIPDEVLAEFKGVPMEVEVDMSRPEEGRMSKAGQVLVDLATKRVY 164
[Close]
BLAST of mRNA_S-dermatodea_contig8416.16585.1 vs. uniprot
Match: A0A835YJC3_9STRA (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJC3_9STRA)

HSP 1 Score: 166 bits (421), Expect = 1.310e-49
Identity = 86/160 (53.75%), Postives = 108/160 (67.50%), Query Frame = 1 
Query:   64 MNSTFRGAAAQFLSKQHPVTHKQEVCRLYRASLKLLDSWAIDRTVFNDEATAMRKMFDEGSKCEPDSARAKALMRDAYKKVGDYVHVDRYIRPYMPSGSSFMRNPPPPLEACYPLGIPDSVLAEFKGIPMEVEVDMSRPEEGRMSKAGQVLVDLATKRVY 543
            MN++FR  A +F      +THKQEVCRLYRASL+LLDSWA+DRTVF DEA  +R  FD  +  +  S RA+ L+ +A   +  YVH DRYI  YMP GS FMRNP  PLE CYP GIP+ V  E  GI  E+ +DM+  + G  +KAG + VDLATK++Y
Sbjct:    1 MNASFRAVAERFRMAPESLTHKQEVCRLYRASLRLLDSWAVDRTVFLDEAEKIRDQFDANAALDARSGRARYLIANARASLRTYVHPDRYIPAYMPGGSLFMRNPALPLEVCYPNGIPEDVAKEMGGI--ELNIDMTYAKPGVKAKAGTLYVDLATKQMY 158
[Close]
BLAST of mRNA_S-dermatodea_contig8416.16585.1 vs. uniprot
Match: D0NC32_PHYIT (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9 n=20 Tax=Peronosporaceae TaxID=4777 RepID=D0NC32_PHYIT)

HSP 1 Score: 133 bits (335), Expect = 1.540e-36
Identity = 69/138 (50.00%), Postives = 94/138 (68.12%), Query Frame = 1 
Query:   52 MNAQMNSTFRGAAAQFLSKQHPVTHKQEVCRLYRASLKLLDSWAIDRTVFNDEATAMRKMFDEGSKCEPDSARAKALMRDAYKKVGDYVHVDRYIRPYMPSGSSFMRNPPPPLEACYPLG-IPDSV-LAEFKGIPMEV 459
            +NA MN TFR    +F+     ++HKQ+V R+Y+ SLK LDSW IDR ++N+EAT +R  FD  SK +P+S  AK L+R+A +KV  Y H DRYI  YMP GS FMRN P PL+ C+P G IP+ V L+  +GI +++
Sbjct:    6 VNANMNKTFREVVGRFVGAPPQLSHKQKVQRVYKKSLKTLDSWVIDRRLWNEEATKIRAEFDANSKLDPESGLAKRLVREAQEKVDHYTHPDRYIFNYMPGGSLFMRNAPIPLDVCFPDGNIPEDVELSPLEGINIDM 143
[Close]
BLAST of mRNA_S-dermatodea_contig8416.16585.1 vs. uniprot
Match: A0A3F2RHY1_9STRA (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9 n=3 Tax=Phytophthora TaxID=4783 RepID=A0A3F2RHY1_9STRA)

HSP 1 Score: 132 bits (331), Expect = 6.190e-36
Identity = 70/143 (48.95%), Postives = 93/143 (65.03%), Query Frame = 1 
Query:   52 MNAQMNSTFRGAAAQFLSKQHPVTHKQEVCRLYRASLKLLDSWAIDRTVFNDEATAMRKMFDEGSKCEPDSARAKALMRDAYKKVGDYVHVDRYIRPYMPSGSSFMRNPPPPLEACYPLG-IPDSVLAEFKGIPME-VEVDMS 474
            +N  MN TFR    +F+ K   +THKQ V RLY+ SLK LDSW IDR ++N+EAT +R  F+  SK +P+S  AK L+R+A +KV  Y H DRYI  YMP G+ +MRN P PL+ C+P G IPD V       P+E + +DM+
Sbjct:    6 VNPNMNKTFREVVGRFVGKPQQLTHKQTVQRLYKKSLKTLDSWIIDRRLWNEEATKIRAEFNTNSKLDPESGLAKRLVREAQEKVDHYTHPDRYIFNYMPGGTLYMRNAPIPLDVCFPDGVIPDDVEVS----PLEAINIDMT 144
[Close]
BLAST of mRNA_S-dermatodea_contig8416.16585.1 vs. uniprot
Match: A0A8K1CT02_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CT02_PYTOL)

HSP 1 Score: 130 bits (328), Expect = 1.560e-35
Identity = 62/123 (50.41%), Postives = 84/123 (68.29%), Query Frame = 1 
Query:   52 MNAQMNSTFRGAAAQFLSKQHPVTHKQEVCRLYRASLKLLDSWAIDRTVFNDEATAMRKMFDEGSKCEPDSARAKALMRDAYKKVGDYVHVDRYIRPYMPSGSSFMRNPPPPLEACYPLGIPD 420
            +NA MN TFR   A+F +    ++HKQ V RLY+ SLK LDSW IDR ++N+EAT +R  F++    EP+S  AK L+R+A +K+  Y H DRY+  YMP G+ FMRN P PL+ C+P GIP+
Sbjct:    3 VNANMNQTFREVVARFANPTEKLSHKQTVTRLYKQSLKTLDSWIIDRRLWNEEATKIRAEFEQNKHLEPNSGLAKRLVREAEEKLEKYTHPDRYVYNYMPGGTRFMRNAPIPLDVCFPDGIPE 125
[Close]
BLAST of mRNA_S-dermatodea_contig8416.16585.1 vs. uniprot
Match: A0A484DVB9_BRELC (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9 n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DVB9_BRELC)

HSP 1 Score: 130 bits (326), Expect = 9.800e-35
Identity = 68/138 (49.28%), Postives = 91/138 (65.94%), Query Frame = 1 
Query:   52 MNAQMNSTFRGAAAQFLSKQHPVTHKQEVCRLYRASLKLLDSWAIDRTVFNDEATAMRKMFDEGSKCEPDSARAKALMRDAYKKVGDYVHVDRYIRPYMPSGSSFMRNPPPPLEACYPLG-IPDSV-LAEFKGIPMEV 459
            +N  MN TFR    +F+     ++HKQ V RLY+ SLK LDSW IDR ++N+EAT +R  FD  +  + DS +AK L+R+A +KV  Y H DRYI  YMP GS FMRN P PL+ C+P G IPD V L+  +GI +++
Sbjct:   42 VNVNMNKTFRDVVGRFVGVPPQLSHKQSVQRLYKKSLKTLDSWIIDRRLWNEEATKIRAEFDANANLDADSGQAKRLIREAQEKVEHYTHPDRYIFNYMPGGSLFMRNAPIPLDVCFPDGVIPDDVELSPLEGINIDM 179
[Close]
BLAST of mRNA_S-dermatodea_contig8416.16585.1 vs. uniprot
Match: K3WSQ1_GLOUD (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9 n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WSQ1_GLOUD)

HSP 1 Score: 128 bits (321), Expect = 1.830e-34
Identity = 68/143 (47.55%), Postives = 91/143 (63.64%), Query Frame = 1 
Query:   52 MNAQMNSTFRGAAAQFLSKQHPVTHKQEVCRLYRASLKLLDSWAIDRTVFNDEATAMRKMFDEGSKCEPDSARAKALMRDAYKKVGDYVHVDRYIRPYMPSGSSFMRNPPPPLEACYPLG-IPDSVLAEFKGIPME-VEVDMS 474
            +N  MN TFR   A+F +    ++HKQ V RLY+ SLK LDSW IDR ++N+EAT +R  FD+    +P S  AK L+R+A +KV  Y H D+Y+  YMP G+ FMRN P PL+ C+P G IPD V       PME + +DM+
Sbjct:    3 VNPNMNKTFREVVARFGAPAEELSHKQAVQRLYKQSLKTLDSWIIDRRLWNEEATKIRAQFDQNRNLDPSSGLAKRLVREAQEKVEHYTHPDKYVFNYMPGGTRFMRNAPIPLDVCFPDGVIPDDVEVS----PMEAINIDMT 141
[Close]
BLAST of mRNA_S-dermatodea_contig8416.16585.1 vs. uniprot
Match: A0A7S2KZH1_9STRA (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9 n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KZH1_9STRA)

HSP 1 Score: 125 bits (315), Expect = 1.270e-33
Identity = 64/157 (40.76%), Postives = 97/157 (61.78%), Query Frame = 1 
Query:   64 MNSTFRGAAAQFLSKQHPVTHKQEVCRLYRASLKLLDSWAIDRTVFNDEATAMRKMFDEGSKCEPDSARAKALMRDAYKKVGDYVHVDRYIRPYMPSGSSFMRNPPPPLEACYPLGIPDSVLAEFKGIPMEVEVDMSRPEEGRMSKAGQVLVDLATK 534
            MN+ F  A +Q+  +   +TH Q+V +LYR SLK+L SWA+DRTVF +EA+ +R  FD    C PD  +A   +R+  +++ +Y H D Y  P+MP GS FMRNPP P++ C+P G    + A+   + +  ++ + + E G+ S  GQVLVD  +K
Sbjct:    1 MNTAFIAAGSQYKQQLPQLTHNQQVAKLYRHSLKVLGSWAVDRTVFIEEASKLRARFDANRNCAPD--KANRFLREGKEELQEYTHPDPYRIPFMPGGSMFMRNPPLPMDVCFPDG---DIPADAPKVTLNPDMSICKEETGK-SAVGQVLVDFTSK 151
[Close]
BLAST of mRNA_S-dermatodea_contig8416.16585.1 vs. uniprot
Match: M4BUQ9_HYAAE (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9 n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BUQ9_HYAAE)

HSP 1 Score: 125 bits (315), Expect = 1.850e-33
Identity = 65/134 (48.51%), Postives = 89/134 (66.42%), Query Frame = 1 
Query:   64 MNSTFRGAAAQFLSKQHPVTHKQEVCRLYRASLKLLDSWAIDRTVFNDEATAMRKMFDEGSKCEPDSARAKALMRDAYKKVGDYVHVDRYIRPYMPSGSSFMRNPPPPLEACYPLG-IPDSV-LAEFKGIPMEV 459
            MN+T R    +F+     ++HKQ V RLY+ SLK LDSW IDR ++N+EAT +R  FD   + +P+S  AK L+R+A +KV  Y H DRYI  YMP GS +MRN P PL+ C+P G IPD V L+  +GI +++
Sbjct:    1 MNATLREVVGRFVGAAPNLSHKQTVQRLYKKSLKTLDSWVIDRRLWNEEATKIRAQFDSNEQLDPNSGLAKRLVREAQEKVDHYTHPDRYIFNYMPGGSLYMRNAPIPLDVCFPDGEIPDDVELSPLEGINIDM 134
[Close]
BLAST of mRNA_S-dermatodea_contig8416.16585.1 vs. uniprot
Match: A0A7S2DAM5_9STRA (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9 n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DAM5_9STRA)

HSP 1 Score: 124 bits (312), Expect = 4.290e-33
Identity = 70/160 (43.75%), Postives = 91/160 (56.88%), Query Frame = 1 
Query:   67 NSTFRGAAAQFLSKQHPVTHKQEVCRLYRASLKLLDSWAIDRTVFNDEATAMRKMFDEGSKCEPDSARAKALMRDAYKKVGDYVHVDRYIRPYMPSGSSFMRNPPPPLEACYPLGIPDSVLAEFKGIPMEVEVDMSRPEEGRM-SKAGQVLVDLATKRVY 543
            N+ F  AA Q+  K   +TH Q VCRLYRASLK L SWA+DR VF  EA  ++  F        DS     L+++  +K+  Y H D+YI  Y+P GS +MRNPP PL  CYP GIP+ V  E   I   + +DMS    G   +  GQV+VD ++K  Y
Sbjct:    3 NAAFVLAAKQYRQKAPDLTHAQVVCRLYRASLKTLGSWAVDRQVFLTEALKIQAEFRANENLSADSPTTTRLVKEGQEKLFSYTHPDKYIPAYLPGGSLYMRNPPLPLSVCYPDGIPEGV--EEGLINKLLNIDMSPVRSGESGATVGQVIVDASSKSTY 160
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig8416.16585.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LFF1_ECTSI3.080e-10389.02NADH dehydrogenase [ubiquinone] 1 beta subcomplex ... [more]
A0A835YJC3_9STRA1.310e-4953.75NADH dehydrogenase [ubiquinone] 1 beta subcomplex ... [more]
D0NC32_PHYIT1.540e-3650.00NADH dehydrogenase [ubiquinone] 1 beta subcomplex ... [more]
A0A3F2RHY1_9STRA6.190e-3648.95NADH dehydrogenase [ubiquinone] 1 beta subcomplex ... [more]
A0A8K1CT02_PYTOL1.560e-3550.41Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A484DVB9_BRELC9.800e-3549.28NADH dehydrogenase [ubiquinone] 1 beta subcomplex ... [more]
K3WSQ1_GLOUD1.830e-3447.55NADH dehydrogenase [ubiquinone] 1 beta subcomplex ... [more]
A0A7S2KZH1_9STRA1.270e-3340.76NADH dehydrogenase [ubiquinone] 1 beta subcomplex ... [more]
M4BUQ9_HYAAE1.850e-3348.51NADH dehydrogenase [ubiquinone] 1 beta subcomplex ... [more]
A0A7S2DAM5_9STRA4.290e-3343.75NADH dehydrogenase [ubiquinone] 1 beta subcomplex ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig8416contigS-dermatodea_contig8416:1736..7635 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score303.1
Seed ortholog evalue8.5e-80
Seed eggNOG ortholog2880.D8LFF1
Preferred nameNDUFB9
KEGG koko:K03965,ko:K14777
KEGG TC3.D.1.6
KEGG Pathwayko00190,ko01100,ko04714,ko04723,ko04932,ko05010,ko05012,ko05016,map00190,map01100,map04714,map04723,map04932,map05010,map05012,map05016
KEGG ModuleM00147
GOsGO:0003008,GO:0003674,GO:0003824,GO:0003954,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0005746,GO:0005747,GO:0005773,GO:0005774,GO:0005975,GO:0006091,GO:0006119,GO:0006120,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006996,GO:0007005,GO:0007600,GO:0007605,GO:0008137,GO:0008150,GO:0008152,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009853,GO:0009987,GO:0010257,GO:0015980,GO:0016020,GO:0016043,GO:0016310,GO:0016491,GO:0016651,GO:0016655,GO:0017144,GO:0019637,GO:0019693,GO:0019866,GO:0022607,GO:0022900,GO:0022904,GO:0030964,GO:0031090,GO:0031966,GO:0031967,GO:0031975,GO:0032501,GO:0032981,GO:0032991,GO:0033108,GO:0034622,GO:0034641,GO:0042773,GO:0042775,GO:0043094,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044281,GO:0044422,GO:0044424,GO:0044425,GO:0044429,GO:0044437,GO:0044444,GO:0044446,GO:0044455,GO:0044464,GO:0045271,GO:0045333,GO:0046034,GO:0046483,GO:0050136,GO:0050877,GO:0050954,GO:0055086,GO:0055114,GO:0065003,GO:0070469,GO:0071704,GO:0071840,GO:0072521,GO:0098588,GO:0098796,GO:0098798,GO:0098800,GO:0098803,GO:0098805,GO:1901135,GO:1901360,GO:1901564,GO:1902494,GO:1990204
EggNOG free text desc.mitochondrial electron transport, NADH to ubiquinone
EggNOG OGsKOG3466@1,KOG3466@2759
EC3.6.4.13
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko03009
Hectar predicted targeting categoryother localisation
Exons6
Model size547
Cds size546
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig8416.16585.1prot_S-dermatodea_contig8416.16585.1Saccorhiza dermatodea SderLu1190fm monoicouspolypeptideS-dermatodea_contig8416 1736..7635 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622925341.573531-CDS-S-dermatodea_contig8416:1735..18461622925341.573531-CDS-S-dermatodea_contig8416:1735..1846Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8416 1736..1846 -
1694079868.0608032-CDS-S-dermatodea_contig8416:1735..18461694079868.0608032-CDS-S-dermatodea_contig8416:1735..1846Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8416 1736..1846 -
1622925341.5861096-CDS-S-dermatodea_contig8416:2371..24771622925341.5861096-CDS-S-dermatodea_contig8416:2371..2477Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8416 2372..2477 -
1694079868.0747926-CDS-S-dermatodea_contig8416:2371..24771694079868.0747926-CDS-S-dermatodea_contig8416:2371..2477Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8416 2372..2477 -
1622925341.595735-CDS-S-dermatodea_contig8416:3106..32041622925341.595735-CDS-S-dermatodea_contig8416:3106..3204Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8416 3107..3204 -
1694079868.086167-CDS-S-dermatodea_contig8416:3106..32041694079868.086167-CDS-S-dermatodea_contig8416:3106..3204Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8416 3107..3204 -
1622925341.6066687-CDS-S-dermatodea_contig8416:4636..47351622925341.6066687-CDS-S-dermatodea_contig8416:4636..4735Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8416 4637..4735 -
1694079868.1034958-CDS-S-dermatodea_contig8416:4636..47351694079868.1034958-CDS-S-dermatodea_contig8416:4636..4735Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8416 4637..4735 -
1622925341.6201317-CDS-S-dermatodea_contig8416:6973..70761622925341.6201317-CDS-S-dermatodea_contig8416:6973..7076Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8416 6974..7076 -
1694079868.1141603-CDS-S-dermatodea_contig8416:6973..70761694079868.1141603-CDS-S-dermatodea_contig8416:6973..7076Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8416 6974..7076 -
1622925341.6308992-CDS-S-dermatodea_contig8416:7606..76351622925341.6308992-CDS-S-dermatodea_contig8416:7606..7635Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8416 7607..7635 -
1694079868.1256094-CDS-S-dermatodea_contig8416:7606..76351694079868.1256094-CDS-S-dermatodea_contig8416:7606..7635Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8416 7607..7635 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-dermatodea_contig8416.16585.1

>prot_S-dermatodea_contig8416.16585.1 ID=prot_S-dermatodea_contig8416.16585.1|Name=mRNA_S-dermatodea_contig8416.16585.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=182bp
YHSSSFSQARAGGHSATMNAQMNSTFRGAAAQFLSKQHPVTHKQEVCRLY
RASLKLLDSWAIDRTVFNDEATAMRKMFDEGSKCEPDSARAKALMRDAYK
KVGDYVHVDRYIRPYMPSGSSFMRNPPPPLEACYPLGIPDSVLAEFKGIP
MEVEVDMSRPEEGRMSKAGQVLVDLATKRVY*
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mRNA from alignment at S-dermatodea_contig8416:1736..7635-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-dermatodea_contig8416.16585.1 ID=mRNA_S-dermatodea_contig8416.16585.1|Name=mRNA_S-dermatodea_contig8416.16585.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=5900bp|location=Sequence derived from alignment at S-dermatodea_contig8416:1736..7635- (Saccorhiza dermatodea SderLu1190fm monoicous)
TATCATAGCAGCAGCTTCTCGCAGGCAAGGTGAGGGGCTGGGACAGCGTT
GAGCACGTCGCGTTTGCATAGAATTGGGTAGTGTGTTCGTCTGCCTGCGT
TTCCGGTCCGTTCCGAGCGATTATTGTAGCCGGGTGCTGGGTACCATACT
CCCGTCATCCTGACTATGTTTTGCCTCTTTCTACGATCAGATCATATCAA
TAGAGGAGCCATTGCCCCATCGTGCTGGAGCTGCTTGTCCGATGGTCCTC
GTGCTGCAGGCAGTACGTAGCTCTGTAGCTCCATCAGAGGACTCATCGAA
ACAAACATGGCAGTCGTGGTGTCGAAGCTTGGTTCCTTGACTCCCTCGTA
GTCTCTTGTAAACCCTGCGTTTTGTTTCCACAGCCAGGAGCCAGGAGTAG
CCCAGATCACGATGGACGCTGGTGGCAATATAGAACAAGGGTTAATGCTG
CAGCAGTAAGTATGCATGCAACGTTTGGTGCCCCCTCGCCTACCACCTGT
TGCTTGCCTTTGGCACCCACCTTGTGAACGTCCGAACCTGGGGTTGATCG
CTGCAACAGGGCGGGAGGACACAGCGCAACCATGAACGCGCAAATGAATT
CAACGTTCCGCGGGGCGGCGGCGCAGTTCCTGTCAAAGCAGCACCCCGTC
ACACACAAGCAGGTGAGACGTGAGACACTATTTTTATTTTGTGTGTTGGC
TCTCAGTATTCTGTCCACTACTGTACATACTAAAACAGTATTAATACTTT
ATAAAAAACATAATCCACTTCGTATTATAGTTCACCTGTACATCCCTAAC
TCACGGGCACACTCCAGGGGAAACCGAGAGTAGGTACGTTTACTCTCTCA
GTAAGGCATATGTGCGAGGGGGGACAGTAAGTGCACAGTTAATATTTTAT
TTCGACAGGTTCGTCGGAGAGCAATTTTTTGTTTATCAGATTCAGGATCA
TTCAGATTCATATTCAGAATGCGGCGCAATTAGCCTTGTTTTGACCTCCG
GTCGGTCTCATTCTGGTGATTTCTCAGACTCATACGCCATTTTTACAATC
TGAATCTGAGCGGGCGTGTAGAGACTCAGAAACTCATATAGCAGCAGTGA
GGGCAGCTGCCGACGTGACACGGCGGGCCCAGCGTGCAACCATGGCCGAC
AGCGTCAGTAGTGCGTGTGGCTGTGGTGTCGGGCCGGCCCGACAGCTCGT
CTGTCGCCTATCGATGATGATGTCAGATGGTGACGACGTGGACCGATGCT
GAATCAATTTTGTTGGGGTTGTTCTGTTTACACGAAAAACACAGCTGTAC
CAAGCAGAGCTCACTCGACGCCGGCATCTATAGCTTTATATCCAGGGCGC
CGTTCGGGGTGCCGCCTTCGCCCGGGCGCCCTCCCACTGTCTGGTATGGG
ATGCTACGAGCTGTGAGGCCCGAAAGAAAACACAGCAGTTATGGTGTTGA
TCGGGGTCGTAGATGGGCAAACGGAATTTGGCGAAAAAAGGAGACCCGGG
CAAAAAGCGCCCCGAGTTTGAGATGCATCGCACGCCGATGAACACAGAGA
CCGCCACGATTGTTTTCGCTGCCCCACGGCTGGCATACACCGTATGACAC
AGTTGGCGCTGGGCCGGGAGGAGGTAGCACCCCAACCCGTGCTATGAAAG
AGGAGTTATCCATGGCGGCATCGAAGTGGCCTCTTTTTGAAACACAGGAA
AAAACGGAGTGCTACAGGCCAAAGCGAATCGTGCCGTATGAGATCGAACC
GCAACAAAAAAAAATCAGAAGGCACCACTTTTTTTTTTTTTTTTCGTCTG
AAGCTGAATCTGAAAAAATAAAACAAAGGGCATCCGAAACTGTTTACTAG
TGACTACTATCATACTCTGTACTTGTACACTAGTTCGGGATGGGGTGGGG
ATTTGCCTTCTACCAGGTAGAGGGGGAATGGCAACCGGCGACCTGTGCTG
GTTGTGATTTGAAGCCTCCTCCTTAGTCGCATTTAACGTGGAGAAGAGAG
CGCCGCTGGCCTCCATTTGGGGCTGAGGTTTTGCATGCAGTGTGGAGCGT
GCGAGCTTTATTCGCGTCATCATATGAGCACTGCCGTTATTCCATTCATG
CAAGCGCACTTCCGGAAATTGCTTTCGCGCCTGCTGGGCATGCTGCGGTC
GGTATCTCTCTCTGTGCCTCCGCCGGTGGAGGCATGATCCTTCATGGCAG
AGATCCATTGAGGATATAAACGACGACAGCACTTGGTTTGACCACAAGGC
CTAGACCTGCCTGCCCTTTTCGTAGCACGCGCCATGTTGTTCTCCCGCAT
CAGAGGTAATCATTGTGCCTAAAACTGGTGGCGAGTTATGTGCGCATCTA
AAAGCTCGTGGGAATACATGGACCGGAAGGGCAACAAGATATGGTGTTCG
GTAGGGTTGTGAGTCGGCTGGCGCAGCCAGCTTAAACTAGTCGGCGACTA
TCCGACTATTGCCTACTACTCGGCGTCAGCCGATTAGTTGGCCATAGTCG
GGCGAGCGCAGCGAGCCGGTGCCGCCGTCTATTTTCTCCCGCGTGAAAAA
CGCCATACCATGACCTATGAAACCCAAAGGCCAACAAATCGGCATGCCCC
GCAGCCGACTGACTGACTATACAATGAGTTGGTCAGTCGGACTAATAGTC
GGAGCCGACCCACAACCCTAGGTCTTCGGGGATCGGATCAAAGCTGGCAC
ACGCCGGCGGTTGTGGCACGGCCGTGACGAAGGGGACGTATTCACCACGA
TAATAGAGTATTAATACATGTATTTGTGTCCCATCTTCCCTGTTTGATGT
AATTCGCGATCGGTGCCATGTTTGTAGCGGCCGTGGCACTCGCCCTCGCG
ATGGTGTGGTTTGACGGTAAGCGATCGACCCGTGTTTTTGATCCCCCCAG
GAAGTATGCCGGCTGTACCGGGCCTCGCTGAAGCTGCTGGATTCGTGGGC
GATCGATAGGACTGTCTTCAACGACGAGGCCACCGCCATGCGCAAAATGG
TGGGTCGTGTGGGTTCTTGGTCGCAAGGGGCTGCGTTTTTGTGAATCGCG
GCGGGGGAGTCAACTAACTATTATTAGCTGTGGTGGGAGGCGCGATTCTA
TTGTGTTCTAGAGGACCGTTTCCCGACGCCGGATGTGTCCTCTTTGGACT
CGACCTCCTTCCGCGTCGCTGTCTTGTGTTGTACGTTTAGTTCCCAAGCG
GCCAAGATTAGATCCACCTGATTTGGACCATGTGCTGCAGGGACGGAGGA
CGGTACCGGTGCGGCTTTGCGGGCACTGCCATACCGTCGAATCGCATGCT
GTTGATATTCTTGACACCCTTGACACACTGGAAACGACATATAGGGTTTG
ACGGAAGGAACCGCTTCTTTCGTCGGTTGCGCAGGTTGCAACCTCTCATC
GTCCCTGCCATTCGCACTTTTCTAAGAAGCTTACTTTATAATTTATGCAA
TCCAACCCTCTATCATACCCTGTCCCGATTGTGGCCACACGGCTGGATTG
TTAGATTTACGGAAGACCATAGATAAGAGGTCCAAATTCGTCGCAAATTT
CACCTTAGAAAAAAGCGTTCAGGCCAGAAATGATTGAGTATTCATGGTCG
ATGCTGTTATATAGGCCAGACCTCGCGTTTTTGTTTTCATGAGTAAAAAC
AAAAATGGTGTTTGGGTACGCATGGCCGGAACAGTTGAGTATTGTGTTCA
TGGTCGTGACAGTTGGTCCTCATTACTATTATACTAATATTACTATTGTA
CTACTAATACTATTATACTACTATTACTATTGTACTACTATTAGTGTGTA
CCAGAATATCCGAAGTATCAGTTATTATTATAGTTATAACGTTGTAACCC
GTTCGGCACGGAGTCCGTTGTGCGTGGAACAGCGGGCACACTGCGGAGAC
TGTGCACGCATAAGTGGCCCCACGTACATGCGTGCTAGCTGCTCGTGGCA
GGGTATTACTCTCGCACCGCCACTATGATATTATCAATATTAATACTATA
CTGTTTTTACTATGTACTATCAATATTACGGTACTATTAATACTATGTGC
TATTAATACTATGGTACTATTATTACTATGTCCTATTAGTATTATGGTAC
TATTTAAGTCACGGTTTGGTCGCTGTTCGATGTGAAATACGGTGCAGCCA
AGAAAGAAGTGGCCCTACAAAACGAATTCAGCTCCAATAGGGTTAACGTG
AGACTATCACCACCACCACCATCACCATCACCATCACCATCATGATCGCC
ATGGCTCGAACACGCCCTGTCCCAAAGCCTACTCTTACCGACCTACACAG
CGCTGGACACCTTGTCGCGCGAACCCTAGAGCCACCTCGTCCCCTTCTCA
GCACGCGCGAATGGGGTCGACTTTGACATGGCAATGATCCCGCTTGCCGT
CGTTCTCTGATATTTTGCATGCGTTACCCAGTTCGACGAGGGGTCAAAAT
GCGAGCCCGACAGCGCGCGCGCGAAGGCGCTCATGCGAGATGCTTACAAG
AAGGTTGGCGACTACGTTCACGTCGACAGGTGGGCTTGCCGCAGCTTTTG
CAGGGCGGCTATGTGTACTCGATTGTTTTGCCTCTTAGTTGCAAGTGTTG
CGTAGTGAGCAGGACGGTCACTAGCAACGACGCGTGTTTTTACGAGCGGT
CGGTAGAGATTCCTATTATTTTGCTCCGAAATGAATTCGCTGGCAAGCCT
CTCCTGACGAGGACCGCGAAGATAAGTCTCAGGCTAGGCTCTTCGCTGAA
GAAGTTGATGAGGACTCATGGGCACTATGTATAGATGTACTGGTAGAAGC
AATCGGAAACGAGTCCGACTGCTATTGTTTCGCTTGTGTACTCTTCTTGT
TCTCACTACGTATCACATAAGCCGTAGTTGTAACCCAACTTGCAAGACTA
ATACGCCACTCGCAAACGACCTCGGAGCACTTTCCCCCCCAATTCGAGTG
AGTGCTCGCATCCGAGGTTTTGCTGACGATGATCTTGCAGCACTCGGTAT
ATATTTGTCCCGCCAGCGACCAGGTTCAATCTGATACCACCGCCGCCGTT
TGCGCGTGGAATGGAATACCATCCGCCGTATGATCCCGTGGCATGTCCTG
GTACTTTTCGCGGAACCCATTAACGAATCGCGAATTCCGACCGACCGTCT
CTCCTCAGGTACATCCGGCCATACATGCCCTCCGGTAGCAGCTTCATGAG
AAACCCTCCCCCGCCGCTCGAGGCTTGCTACCCGCTCGGGATCCCAGACT
CAGTCCTCGCGGAGGTACGCTGTAGGTCATACGACGGTCGGTGACGAGCA
TCGTAAGGGTGGTTTCCGAAGATGCCCATAATTGAGATGGAGGGGTTACG
CGCGAAATTTCACCGCGGTAGCCATTCGGTAGAGGTGCCCAAGATGGTGG
CGAGTACGCCGACGTTGTTGACCAGGTTGAGGGAGGCCTTGGCGTTTATT
CCGACGTTGTGTACTTGTACATCTATCTAGAAAGGGGTCGGAATTCGCCG
GGGAAGAGGCAGAGGAGGCAAGAGGCTGTCCGGACGACGAGCGCGCGGCG
ACAATGTCGAGCATTCCTGGAAATCGGGCACGTGCGCGCGATGCAATCCA
GGTCCTCTCGGGTCCTTTGAGTCATGAAGATTTCTCCCGTCGCCGCCGAT
GAGCCCGTCAATTTGGGGGCTGATCTTAAGCTAGAATAGAGTTACGACGC
CAATGCTTGCGGTTGCGGATGATAGCGCACATTTTGACGCTTACTAACGA
CAGGCGAATCCCTCCCCGCACGCCGTTTTGTTTCACAAGTTCAAGGGCAT
TCCCATGGAAGTGGAGGTGGACATGTCCAGGCCCGAGGAGGGGAGGATGT
CCAAGGCCGGCCAGGTCCTCGTCGACCTCGCCACGAAACGCGTCTACTAG
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Coding sequence (CDS) from alignment at S-dermatodea_contig8416:1736..7635-

>mRNA_S-dermatodea_contig8416.16585.1 ID=mRNA_S-dermatodea_contig8416.16585.1|Name=mRNA_S-dermatodea_contig8416.16585.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=1092bp|location=Sequence derived from alignment at S-dermatodea_contig8416:1736..7635- (Saccorhiza dermatodea SderLu1190fm monoicous)
TATCATAGCAGCAGCTTCTCGCAGGCAAGTATCATAGCAGCAGCTTCTCG
CAGGCAAGGGCGGGAGGACACAGCGCAACCATGAACGCGCAAATGAATTC
AACGTTCCGCGGGGCGGCGGCGCAGTTCCTGTCAAAGCAGCACCCCGTCA
CACACAAGCAGGGCGGGAGGACACAGCGCAACCATGAACGCGCAAATGAA
TTCAACGTTCCGCGGGGCGGCGGCGCAGTTCCTGTCAAAGCAGCACCCCG
TCACACACAAGCAGGAAGTATGCCGGCTGTACCGGGCCTCGCTGAAGCTG
CTGGATTCGTGGGCGATCGATAGGACTGTCTTCAACGACGAGGCCACCGC
CATGCGCAAAATGGAAGTATGCCGGCTGTACCGGGCCTCGCTGAAGCTGC
TGGATTCGTGGGCGATCGATAGGACTGTCTTCAACGACGAGGCCACCGCC
ATGCGCAAAATGTTCGACGAGGGGTCAAAATGCGAGCCCGACAGCGCGCG
CGCGAAGGCGCTCATGCGAGATGCTTACAAGAAGGTTGGCGACTACGTTC
ACGTCGACAGTTCGACGAGGGGTCAAAATGCGAGCCCGACAGCGCGCGCG
CGAAGGCGCTCATGCGAGATGCTTACAAGAAGGTTGGCGACTACGTTCAC
GTCGACAGGTACATCCGGCCATACATGCCCTCCGGTAGCAGCTTCATGAG
AAACCCTCCCCCGCCGCTCGAGGCTTGCTACCCGCTCGGGATCCCAGACT
CAGTCCTCGCGGAGGTACATCCGGCCATACATGCCCTCCGGTAGCAGCTT
CATGAGAAACCCTCCCCCGCCGCTCGAGGCTTGCTACCCGCTCGGGATCC
CAGACTCAGTCCTCGCGGAGTTCAAGGGCATTCCCATGGAAGTGGAGGTG
GACATGTCCAGGCCCGAGGAGGGGAGGATGTCCAAGGCCGGCCAGGTCCT
CGTCGACCTCGCCACGAAACGCGTCTACTAGTTCAAGGGCATTCCCATGG
AAGTGGAGGTGGACATGTCCAGGCCCGAGGAGGGGAGGATGTCCAAGGCC
GGCCAGGTCCTCGTCGACCTCGCCACGAAACGCGTCTACTAG
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