prot_S-dermatodea_contig84107.16582.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_S-dermatodea_contig84107.16582.1
Unique Name	prot_S-dermatodea_contig84107.16582.1
Type	polypeptide
Organism	Saccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length	121

Homology

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BLAST of mRNA_S-dermatodea_contig84107.16582.1 vs. uniprot
Match: D8LHZ7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHZ7_ECTSI)

HSP 1 Score: 245 bits (625), Expect = 3.490e-73
Identity = 118/119 (99.16%), Postives = 119/119 (100.00%), Query Frame = 0

Query:    3 RSGRAGRTQPGKCFRLFTAWSFQHELEDNTVPEIQRTNMGNVVLLLKSLGINDLLHFEFMDPPPPETLIRALEQLYALGALNDRGELTKLGRRMAEFPLDPMLSKTVIAAEKYGCVDEV 121
            RSGRAGRTQPGKCFRLFTAWSFQHELEDNTVPEIQRTNMGNVVLLLKSLGINDLLHFEFMDPPPPETLIRALEQLYALGALNDRGELTKLGRRMAEFPLDPMLSKTVIAAEKYGCV+EV
Sbjct:  801 RSGRAGRTQPGKCFRLFTAWSFQHELEDNTVPEIQRTNMGNVVLLLKSLGINDLLHFEFMDPPPPETLIRALEQLYALGALNDRGELTKLGRRMAEFPLDPMLSKTVIAAEKYGCVEEV 919

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BLAST of mRNA_S-dermatodea_contig84107.16582.1 vs. uniprot
Match: A0A6H5JZ18_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZ18_9PHAE)

HSP 1 Score: 236 bits (601), Expect = 7.160e-72
Identity = 113/114 (99.12%), Postives = 114/114 (100.00%), Query Frame = 0

Query:    8 GRTQPGKCFRLFTAWSFQHELEDNTVPEIQRTNMGNVVLLLKSLGINDLLHFEFMDPPPPETLIRALEQLYALGALNDRGELTKLGRRMAEFPLDPMLSKTVIAAEKYGCVDEV 121
            GRTQPGKCFRLFTAWSFQHELEDNTVPEIQRTNMGNVVLLLKSLGINDLLHFEFMDPPPPETLIRALEQLYALGALNDRGELTKLGRRMAEFPLDPMLSKTVIAAEKYGCV+EV
Sbjct:  367 GRTQPGKCFRLFTAWSFQHELEDNTVPEIQRTNMGNVVLLLKSLGINDLLHFEFMDPPPPETLIRALEQLYALGALNDRGELTKLGRRMAEFPLDPMLSKTVIAAEKYGCVEEV 480

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BLAST of mRNA_S-dermatodea_contig84107.16582.1 vs. uniprot
Match: A0A835YTF2_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTF2_9STRA)

HSP 1 Score: 230 bits (587), Expect = 5.560e-68
Identity = 110/119 (92.44%), Postives = 114/119 (95.80%), Query Frame = 0

Query:    3 RSGRAGRTQPGKCFRLFTAWSFQHELEDNTVPEIQRTNMGNVVLLLKSLGINDLLHFEFMDPPPPETLIRALEQLYALGALNDRGELTKLGRRMAEFPLDPMLSKTVIAAEKYGCVDEV 121
            RSGRAGRTQPGKCFRLFTAWSF HELEDNTVPEIQRTNMGNVVL+LKSLGI+DLLHF+FMDPPPPE LIRALEQLYALGALNDRGELTK GRRMAEFPLDPM+SK VIAAEKYGCV EV
Sbjct:  773 RSGRAGRTQPGKCFRLFTAWSFAHELEDNTVPEIQRTNMGNVVLMLKSLGIHDLLHFDFMDPPPPEALIRALEQLYALGALNDRGELTKQGRRMAEFPLDPMMSKAVIAAEKYGCVAEV 891

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BLAST of mRNA_S-dermatodea_contig84107.16582.1 vs. uniprot
Match: A0A7S3J8K1_9SPIT (Hypothetical protein (Fragment) n=1 Tax=Euplotes harpa TaxID=151035 RepID=A0A7S3J8K1_9SPIT)

HSP 1 Score: 210 bits (534), Expect = 3.060e-67
Identity = 96/119 (80.67%), Postives = 110/119 (92.44%), Query Frame = 0

Query:    3 RSGRAGRTQPGKCFRLFTAWSFQHELEDNTVPEIQRTNMGNVVLLLKSLGINDLLHFEFMDPPPPETLIRALEQLYALGALNDRGELTKLGRRMAEFPLDPMLSKTVIAAEKYGCVDEV 121
            R+GRAGR  PGKCFRL+T+WS+Q+EL+ NT+PEIQRTN+GNVVL+LK LGINDL+HF+F+DPPP ETLIRALEQLYALGALND GELTKLGRRMAEFPLDPMLSK VI AEKY CVD++
Sbjct:   41 RAGRAGRVSPGKCFRLYTSWSYQNELDPNTIPEIQRTNLGNVVLMLKGLGINDLIHFDFLDPPPIETLIRALEQLYALGALNDEGELTKLGRRMAEFPLDPMLSKMVIQAEKYKCVDQI 159

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BLAST of mRNA_S-dermatodea_contig84107.16582.1 vs. uniprot
Match: B8CEI8_THAPS (HA2 domain-containing protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CEI8_THAPS)

HSP 1 Score: 209 bits (531), Expect = 3.130e-66
Identity = 101/119 (84.87%), Postives = 110/119 (92.44%), Query Frame = 0

Query:    3 RSGRAGRTQPGKCFRLFTAWSFQHELEDNTVPEIQRTNMGNVVLLLKSLGINDLLHFEFMDPPPPETLIRALEQLYALGALNDRGELTKLGRRMAEFPLDPMLSKTVIAAEKYGCVDEV 121
            R+GRAGRTQPGKCFRLFTA+SFQHEL+ NT PEI RTNM NVVL+LKSLGI++LL F+FMD PPPETLIRALEQLYALGALNDRGELTK+GRRMAEFPLDPMLSKTVI +EKY CV EV
Sbjct:   11 RAGRAGRTQPGKCFRLFTAYSFQHELDPNTTPEILRTNMCNVVLMLKSLGIDNLLAFDFMDAPPPETLIRALEQLYALGALNDRGELTKMGRRMAEFPLDPMLSKTVIVSEKYKCVSEV 129

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BLAST of mRNA_S-dermatodea_contig84107.16582.1 vs. uniprot
Match: A0A6U3GL79_9CHLO (RNA helicase n=1 Tax=Mantoniella antarctica TaxID=81844 RepID=A0A6U3GL79_9CHLO)

HSP 1 Score: 216 bits (551), Expect = 2.340e-65
Identity = 100/121 (82.64%), Postives = 115/121 (95.04%), Query Frame = 0

Query:    1 MYRSGRAGRTQPGKCFRLFTAWSFQHELEDNTVPEIQRTNMGNVVLLLKSLGINDLLHFEFMDPPPPETLIRALEQLYALGALNDRGELTKLGRRMAEFPLDPMLSKTVIAAEKYGCVDEV 121
            + R+GRAGRTQPGKCFRL+TAWSFQ+EL+ NTVPEIQRTN+GNVVL+LKSLGINDL+HF+FMD PP ETL+RALEQLYALGALNDRGELTKLGRRMAEFPLDPMLSKT++A++KY C +EV
Sbjct:  262 LQRAGRAGRTQPGKCFRLYTAWSFQNELDPNTVPEIQRTNLGNVVLMLKSLGINDLMHFDFMDAPPAETLLRALEQLYALGALNDRGELTKLGRRMAEFPLDPMLSKTLVASDKYKCSEEV 382

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BLAST of mRNA_S-dermatodea_contig84107.16582.1 vs. uniprot
Match: A0A7S2T8F9_9CHLO (RNA helicase n=1 Tax=Chloropicon roscoffensis TaxID=1461544 RepID=A0A7S2T8F9_9CHLO)

HSP 1 Score: 213 bits (541), Expect = 5.360e-65
Identity = 97/121 (80.17%), Postives = 114/121 (94.21%), Query Frame = 0

Query:    1 MYRSGRAGRTQPGKCFRLFTAWSFQHELEDNTVPEIQRTNMGNVVLLLKSLGINDLLHFEFMDPPPPETLIRALEQLYALGALNDRGELTKLGRRMAEFPLDPMLSKTVIAAEKYGCVDEV 121
            M R+GRAGRT PG+CFRL+TAWSFQHELEDNT+PEIQRTN+GNVVL+LKSLGINDL++F+FMDPPP ETL+RALEQLYALGALNDRGELTKLGR+MAEFPLDPML+K ++A++ YG  +EV
Sbjct:  139 MQRTGRAGRTGPGQCFRLYTAWSFQHELEDNTIPEIQRTNLGNVVLMLKSLGINDLMNFDFMDPPPAETLLRALEQLYALGALNDRGELTKLGRKMAEFPLDPMLAKAMVASDAYGVSEEV 259

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BLAST of mRNA_S-dermatodea_contig84107.16582.1 vs. uniprot
Match: A0A1Y1XN87_9FUNG (Asp-Glu-Ala-His box polypeptide 16, isoform CRA_f n=1 Tax=Anaeromyces robustus TaxID=1754192 RepID=A0A1Y1XN87_9FUNG)

HSP 1 Score: 211 bits (538), Expect = 8.240e-65
Identity = 97/119 (81.51%), Postives = 112/119 (94.12%), Query Frame = 0

Query:    3 RSGRAGRTQPGKCFRLFTAWSFQHELEDNTVPEIQRTNMGNVVLLLKSLGINDLLHFEFMDPPPPETLIRALEQLYALGALNDRGELTKLGRRMAEFPLDPMLSKTVIAAEKYGCVDEV 121
            R+GRAGR  PG CFRL+TAW++Q+ELE+NT+PEIQRTN+G VVL+LKSLGINDL++F+FMDPPP ETLIRALEQLYALGALNDRGELTKLGRRMAEFP DPMLSKT+IA+EKYGC DE+
Sbjct:  123 RAGRAGRVGPGMCFRLYTAWAYQNELEENTIPEIQRTNLGTVVLMLKSLGINDLINFDFMDPPPAETLIRALEQLYALGALNDRGELTKLGRRMAEFPTDPMLSKTLIASEKYGCSDEI 241

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BLAST of mRNA_S-dermatodea_contig84107.16582.1 vs. uniprot
Match: A0A1Y1HSI3_KLENI (RNA helicase n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1HSI3_KLENI)

HSP 1 Score: 220 bits (560), Expect = 2.510e-64
Identity = 100/118 (84.75%), Postives = 115/118 (97.46%), Query Frame = 0

Query:    3 RSGRAGRTQPGKCFRLFTAWSFQHELEDNTVPEIQRTNMGNVVLLLKSLGINDLLHFEFMDPPPPETLIRALEQLYALGALNDRGELTKLGRRMAEFPLDPMLSKTVIAAEKYGCVDE 120
            R+GRAGRT PGKCFRL+TAWS+QHEL+DNTVPEIQRTN+GNVVL+LKSLGINDLL+F+FMDPPP ETL++ALEQLYALGALNDRGELTK+GRRMAEFP+DPML+K +IA+EKYGCVDE
Sbjct:  741 RAGRAGRTSPGKCFRLYTAWSYQHELDDNTVPEIQRTNLGNVVLMLKSLGINDLLNFDFMDPPPAETLLKALEQLYALGALNDRGELTKMGRRMAEFPVDPMLAKMLIASEKYGCVDE 858

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BLAST of mRNA_S-dermatodea_contig84107.16582.1 vs. uniprot
Match: A0A7S0PHI1_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus aporus TaxID=1398097 RepID=A0A7S0PHI1_9STRA)

HSP 1 Score: 208 bits (530), Expect = 2.680e-64
Identity = 98/119 (82.35%), Postives = 109/119 (91.60%), Query Frame = 0

Query:    3 RSGRAGRTQPGKCFRLFTAWSFQHELEDNTVPEIQRTNMGNVVLLLKSLGINDLLHFEFMDPPPPETLIRALEQLYALGALNDRGELTKLGRRMAEFPLDPMLSKTVIAAEKYGCVDEV 121
            RSGRAGRTQPGKCFRL+TAWSFQHELE NT+PEI RTNM NVVL+LKSLGI+DL+ F+FMD PP +TLIRALEQLYALGALND GELTKLGRRMAEFPL+PMLSK+V+A+EKY C  EV
Sbjct:   62 RSGRAGRTQPGKCFRLYTAWSFQHELEPNTIPEILRTNMNNVVLMLKSLGIDDLIRFDFMDAPPADTLIRALEQLYALGALNDHGELTKLGRRMAEFPLEPMLSKSVLASEKYKCTSEV 180

The following BLAST results are available for this feature:

BLAST of mRNA_S-dermatodea_contig84107.16582.1 vs. uniprot

BLAST of mRNA_S-dermatodea_contig84107.16582.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D8LHZ7_ECTSI	3.490e-73	99.16	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5JZ18_9PHAE	7.160e-72	99.12	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A835YTF2_9STRA	5.560e-68	92.44	P-loop containing nucleoside triphosphate hydrolas...	[more]
A0A7S3J8K1_9SPIT	3.060e-67	80.67	Hypothetical protein (Fragment) n=1 Tax=Euplotes h...	[more]
B8CEI8_THAPS	3.130e-66	84.87	HA2 domain-containing protein (Fragment) n=1 Tax=T...	[more]
A0A6U3GL79_9CHLO	2.340e-65	82.64	RNA helicase n=1 Tax=Mantoniella antarctica TaxID=...	[more]
A0A7S2T8F9_9CHLO	5.360e-65	80.17	RNA helicase n=1 Tax=Chloropicon roscoffensis TaxI...	[more]
A0A1Y1XN87_9FUNG	8.240e-65	81.51	Asp-Glu-Ala-His box polypeptide 16, isoform CRA_f ...	[more]
A0A1Y1HSI3_KLENI	2.510e-64	84.75	RNA helicase n=1 Tax=Klebsormidium nitens TaxID=10...	[more]
A0A7S0PHI1_9STRA	2.680e-64	82.35	Hypothetical protein n=1 Tax=Leptocylindrus aporus...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007502	Helicase-associated domain	PFAM	PF04408	HA2	coord: 73..121 e-value: 8.3E-16 score: 58.2
None	No IPR available	GENE3D	1.20.120.1080		coord: 54..121 e-value: 1.3E-26 score: 94.5
None	No IPR available	GENE3D	3.40.50.300		coord: 1..32 e-value: 8.8E-7 score: 30.5
None	No IPR available	PANTHER	PTHR18934	ATP-DEPENDENT RNA HELICASE	coord: 3..121
None	No IPR available	PANTHER	PTHR18934:SF208		coord: 3..121
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 3..120

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
S-dermatodea_contig84107	contig	S-dermatodea_contig84107:103..630 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_S-dermatodea_contig84107.16582.1	mRNA_S-dermatodea_contig84107.16582.1	Saccorhiza dermatodea SderLu1190fm monoicous	mRNA	S-dermatodea_contig84107 103..630 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_S-dermatodea_contig84107.16582.1 ID=prot_S-dermatodea_contig84107.16582.1|Name=mRNA_S-dermatodea_contig84107.16582.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=121bp
MYRSGRAGRTQPGKCFRLFTAWSFQHELEDNTVPEIQRTNMGNVVLLLKS
LGINDLLHFEFMDPPPPETLIRALEQLYALGALNDRGELTKLGRRMAEFP
LDPMLSKTVIAAEKYGCVDEV

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR007502	Helicase-assoc_dom
IPR027417	P-loop_NTPase