prot_S-dermatodea_contig84086.16579.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig84086.16579.1
Unique Nameprot_S-dermatodea_contig84086.16579.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length61
Homology
BLAST of mRNA_S-dermatodea_contig84086.16579.1 vs. uniprot
Match: D8LEK3_ECTSI (Pyruvate dehydrogenase (acetyl-transferring) n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LEK3_ECTSI)

HSP 1 Score: 122 bits (305), Expect = 7.760e-31
Identity = 54/61 (88.52%), Postives = 58/61 (95.08%), Query Frame = 0
Query:    1 MVADSIHNGDKKMSYYREHTHAIASGVDPGRIMAELFAKDGGTCRGAGGSMHIYDKDTHFQ 61
            MVADS+ NGDKKMSYYREHTHA+ASGVD GR+M ELFAKDGGTCRGAGGSMH+YDKDTHFQ
Sbjct:  150 MVADSLGNGDKKMSYYREHTHALASGVDAGRVMGELFAKDGGTCRGAGGSMHVYDKDTHFQ 210          
BLAST of mRNA_S-dermatodea_contig84086.16579.1 vs. uniprot
Match: A0A7S4M2W8_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Prymnesium polylepis TaxID=72548 RepID=A0A7S4M2W8_9EUKA)

HSP 1 Score: 107 bits (268), Expect = 4.050e-27
Identity = 50/60 (83.33%), Postives = 52/60 (86.67%), Query Frame = 0
Query:    2 VADSIHNGDKKMSYYREHTHAIASGVDPGRIMAELFAKDGGTCRGAGGSMHIYDKDTHFQ 61
            VAD+I  GD K SYYREHTHA+AS VDPG IMAELFAKD GTCRG GGSMHIYDKDTHFQ
Sbjct:   81 VADTIKKGDIKYSYYREHTHALASKVDPGAIMAELFAKDTGTCRGTGGSMHIYDKDTHFQ 140          
BLAST of mRNA_S-dermatodea_contig84086.16579.1 vs. uniprot
Match: A0A7S3HUG5_9SPIT (Hypothetical protein (Fragment) n=2 Tax=Choreotrichia TaxID=141411 RepID=A0A7S3HUG5_9SPIT)

HSP 1 Score: 103 bits (258), Expect = 4.100e-27
Identity = 46/61 (75.41%), Postives = 52/61 (85.25%), Query Frame = 0
Query:    1 MVADSIHNGDKKMSYYREHTHAIASGVDPGRIMAELFAKDGGTCRGAGGSMHIYDKDTHFQ 61
            ++AD+I  GDKK SYYREHTHA+ASGV P  IMAELF KD GTCRG GGSMHIYDK+T+FQ
Sbjct:   79 LIADAIKKGDKKFSYYREHTHALASGVSPDAIMAELFGKDTGTCRGTGGSMHIYDKETNFQ 139          
BLAST of mRNA_S-dermatodea_contig84086.16579.1 vs. uniprot
Match: A0A7S4UV86_9STRA (Pyruvate dehydrogenase (acetyl-transferring) n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4UV86_9STRA)

HSP 1 Score: 106 bits (264), Expect = 2.700e-25
Identity = 47/61 (77.05%), Postives = 55/61 (90.16%), Query Frame = 0
Query:    1 MVADSIHNGDKKMSYYREHTHAIASGVDPGRIMAELFAKDGGTCRGAGGSMHIYDKDTHFQ 61
            +V  +I NGDKK SYYREHTHAIASGVDPG +MAELF K+GGTC+GAGGSMHI+DK+T+FQ
Sbjct:  147 LVDYAIKNGDKKYSYYREHTHAIASGVDPGAVMAELFMKEGGTCKGAGGSMHIFDKETYFQ 207          
BLAST of mRNA_S-dermatodea_contig84086.16579.1 vs. uniprot
Match: A0A6T7SKE6_9EUKA (Pyruvate dehydrogenase (acetyl-transferring) n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A6T7SKE6_9EUKA)

HSP 1 Score: 105 bits (262), Expect = 5.030e-25
Identity = 48/61 (78.69%), Postives = 52/61 (85.25%), Query Frame = 0
Query:    1 MVADSIHNGDKKMSYYREHTHAIASGVDPGRIMAELFAKDGGTCRGAGGSMHIYDKDTHFQ 61
            M+AD I+  D K SYYREHTHA+ASG+DPG IMAELFAKD GTCRG GGSMHIYD DTHFQ
Sbjct:  155 MLADFINKDDIKYSYYREHTHALASGIDPGAIMAELFAKDTGTCRGTGGSMHIYDVDTHFQ 215          
BLAST of mRNA_S-dermatodea_contig84086.16579.1 vs. uniprot
Match: A0A7S2KFC8_9STRA (Pyruvate dehydrogenase (acetyl-transferring) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KFC8_9STRA)

HSP 1 Score: 105 bits (262), Expect = 5.030e-25
Identity = 47/61 (77.05%), Postives = 54/61 (88.52%), Query Frame = 0
Query:    1 MVADSIHNGDKKMSYYREHTHAIASGVDPGRIMAELFAKDGGTCRGAGGSMHIYDKDTHFQ 61
            MVA +I NGDKK SYYREHTHA+ASGV PG +MAELF K+GGTC+GAGGSMHI+DK T+FQ
Sbjct:  142 MVASAIKNGDKKYSYYREHTHALASGVAPGPVMAELFMKEGGTCKGAGGSMHIFDKPTYFQ 202          
BLAST of mRNA_S-dermatodea_contig84086.16579.1 vs. uniprot
Match: A0A7S2V5P9_9STRA (Pyruvate dehydrogenase (acetyl-transferring) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V5P9_9STRA)

HSP 1 Score: 105 bits (262), Expect = 5.030e-25
Identity = 47/61 (77.05%), Postives = 54/61 (88.52%), Query Frame = 0
Query:    1 MVADSIHNGDKKMSYYREHTHAIASGVDPGRIMAELFAKDGGTCRGAGGSMHIYDKDTHFQ 61
            +VA+SI  GD K SYYR+HTHA+ASGVD G +MAELF KDGGTCRGAGGSMHIYDK+T+FQ
Sbjct:  177 LVANSIKKGDTKYSYYRDHTHALASGVDGGAVMAELFGKDGGTCRGAGGSMHIYDKETNFQ 237          
BLAST of mRNA_S-dermatodea_contig84086.16579.1 vs. uniprot
Match: K0S6J8_THAOC (E1_dh domain-containing protein (Fragment) n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0S6J8_THAOC)

HSP 1 Score: 99.4 bits (246), Expect = 1.190e-24
Identity = 44/61 (72.13%), Postives = 52/61 (85.25%), Query Frame = 0
Query:    1 MVADSIHNGDKKMSYYREHTHAIASGVDPGRIMAELFAKDGGTCRGAGGSMHIYDKDTHFQ 61
            +V  +I NGDKK SYYREHTHAIASGVDPG +MAELF K+ G+C+GAGGSMHI+DK  +FQ
Sbjct:   83 LVDYAIKNGDKKYSYYREHTHAIASGVDPGEVMAELFMKETGSCKGAGGSMHIFDKSAYFQ 143          
BLAST of mRNA_S-dermatodea_contig84086.16579.1 vs. uniprot
Match: A0A0M0JRY3_9EUKA (Pyruvate dehydrogenase (acetyl-transferring) n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JRY3_9EUKA)

HSP 1 Score: 104 bits (259), Expect = 1.280e-24
Identity = 47/61 (77.05%), Postives = 53/61 (86.89%), Query Frame = 0
Query:    1 MVADSIHNGDKKMSYYREHTHAIASGVDPGRIMAELFAKDGGTCRGAGGSMHIYDKDTHFQ 61
            M+AD++  GD K SYYREHTHA+ASGVD G IMAELFAKD GTCRG GGSMHIYDK+T+FQ
Sbjct:  164 MIADTLKKGDIKYSYYREHTHALASGVDAGAIMAELFAKDTGTCRGTGGSMHIYDKETNFQ 224          
BLAST of mRNA_S-dermatodea_contig84086.16579.1 vs. uniprot
Match: A0A7S3XF84_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Picocystis salinarum TaxID=88271 RepID=A0A7S3XF84_9CHLO)

HSP 1 Score: 96.7 bits (239), Expect = 1.530e-24
Identity = 43/61 (70.49%), Postives = 50/61 (81.97%), Query Frame = 0
Query:    1 MVADSIHNGDKKMSYYREHTHAIASGVDPGRIMAELFAKDGGTCRGAGGSMHIYDKDTHFQ 61
            ++ADSI   D K SYYR+H HAIASGVDPG +MAEL+ KDGGTCRG GGSMHI+D  T+FQ
Sbjct:   46 LLADSIRKDDLKHSYYRDHCHAIASGVDPGAVMAELYGKDGGTCRGTGGSMHIHDPATNFQ 106          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig84086.16579.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LEK3_ECTSI7.760e-3188.52Pyruvate dehydrogenase (acetyl-transferring) n=2 T... [more]
A0A7S4M2W8_9EUKA4.050e-2783.33Hypothetical protein (Fragment) n=1 Tax=Prymnesium... [more]
A0A7S3HUG5_9SPIT4.100e-2775.41Hypothetical protein (Fragment) n=2 Tax=Choreotric... [more]
A0A7S4UV86_9STRA2.700e-2577.05Pyruvate dehydrogenase (acetyl-transferring) n=2 T... [more]
A0A6T7SKE6_9EUKA5.030e-2578.69Pyruvate dehydrogenase (acetyl-transferring) n=1 T... [more]
A0A7S2KFC8_9STRA5.030e-2577.05Pyruvate dehydrogenase (acetyl-transferring) n=1 T... [more]
A0A7S2V5P9_9STRA5.030e-2577.05Pyruvate dehydrogenase (acetyl-transferring) n=1 T... [more]
K0S6J8_THAOC1.190e-2472.13E1_dh domain-containing protein (Fragment) n=1 Tax... [more]
A0A0M0JRY3_9EUKA1.280e-2477.05Pyruvate dehydrogenase (acetyl-transferring) n=1 T... [more]
A0A7S3XF84_9CHLO1.530e-2470.49Hypothetical protein (Fragment) n=1 Tax=Picocystis... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.970coord: 1..61
e-value: 9.1E-15
score: 56.2
NoneNo IPR availablePANTHERPTHR11516:SF25PYRUVATE DEHYDROGENASE E1 COMPONENT SUBUNIT ALPHA-3, CHLOROPLASTICcoord: 4..60
NoneNo IPR availablePANTHERPTHR11516PYRUVATE DEHYDROGENASE E1 COMPONENT, ALPHA SUBUNIT BACTERIAL AND ORGANELLARcoord: 4..60
IPR001017Dehydrogenase, E1 componentPFAMPF00676E1_dhcoord: 3..58
e-value: 1.9E-5
score: 23.8
IPR029061Thiamin diphosphate-binding foldSUPERFAMILY52518Thiamin diphosphate-binding fold (THDP-binding)coord: 6..60

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig84086contigS-dermatodea_contig84086:427..609 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig84086.16579.1mRNA_S-dermatodea_contig84086.16579.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig84086 412..609 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig84086.16579.1 ID=prot_S-dermatodea_contig84086.16579.1|Name=mRNA_S-dermatodea_contig84086.16579.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=61bp
MVADSIHNGDKKMSYYREHTHAIASGVDPGRIMAELFAKDGGTCRGAGGS
MHIYDKDTHFQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001017DH_E1
IPR029061THDP-binding