prot_S-dermatodea_contig8408.16578.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig8408.16578.1
Unique Nameprot_S-dermatodea_contig8408.16578.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length102
Homology
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BLAST of mRNA_S-dermatodea_contig8408.16578.1 vs. uniprot
Match: D7FJN0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FJN0_ECTSI)

HSP 1 Score: 73.9 bits (180), Expect = 2.980e-13
Identity = 40/85 (47.06%), Postives = 51/85 (60.00%), Query Frame = 0 
Query:    4 NDIGGATGAMTRYALGGDGYVDPVDFENVFEV----------VNGTAQITYVPMITAFLNALDEGVARLTDRGVTGRILLGNLFS 78
            N++     A+TRY++GG+GY DPV F+ VFEV           +G    T+ PMI   L A DEG+ RL D GVTGRILL N+ S
Sbjct:  184 NELNRVVEAITRYSIGGEGYEDPVAFDKVFEVNATTGFPVLDESGLPVPTFAPMIEEVLGAWDEGIGRLIDAGVTGRILLANVGS 268
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig8408.16578.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FJN0_ECTSI2.980e-1347.06Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig8408contigS-dermatodea_contig8408:5701..6214 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig8408.16578.1mRNA_S-dermatodea_contig8408.16578.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig8408 5701..6216 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig8408.16578.1 ID=prot_S-dermatodea_contig8408.16578.1|Name=mRNA_S-dermatodea_contig8408.16578.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=102bp
MVGNDIGGATGAMTRYALGGDGYVDPVDFENVFEVVNGTAQITYVPMITA
FLNALDEGVARLTDRGVTGRILLGNLFSLIGFPVSVPTFGAKAGLICLLG
K*
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