mRNA_S-dermatodea_contig84059.16576.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-dermatodea_contig84059.16576.1
Unique NamemRNA_S-dermatodea_contig84059.16576.1
TypemRNA
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Homology
BLAST of mRNA_S-dermatodea_contig84059.16576.1 vs. uniprot
Match: A0A7S6ZPA4_9STRA (Ycf45 n=1 Tax=Schizocladia ischiensis TaxID=196139 RepID=A0A7S6ZPA4_9STRA)

HSP 1 Score: 437 bits (1124), Expect = 5.900e-151
Identity = 225/225 (100.00%), Postives = 225/225 (100.00%), Query Frame = 1
Query:    1 MNINSNLNQLIQIFSFQIKEIIQNHPNNNNLIEIILDVGRRPEGRFSFGPDYLAVKVISWQDLEYITKRISKFSDDNRAGIERTLHRVSCIRNRQGIIIGLTCRVGRSVVGTINIIRDLLESGNSLLVLGKPGVGKTTVIREISRVLSDEIRKRVVIVDTSNEIAGNSDVPHAGIGRARRMQVSFTQNQHDIMIEAVQNHMPEVIIVDEIGTELEALAARTIAER 675
            MNINSNLNQLIQIFSFQIKEIIQNHPNNNNLIEIILDVGRRPEGRFSFGPDYLAVKVISWQDLEYITKRISKFSDDNRAGIERTLHRVSCIRNRQGIIIGLTCRVGRSVVGTINIIRDLLESGNSLLVLGKPGVGKTTVIREISRVLSDEIRKRVVIVDTSNEIAGNSDVPHAGIGRARRMQVSFTQNQHDIMIEAVQNHMPEVIIVDEIGTELEALAARTIAER
Sbjct:    1 MNINSNLNQLIQIFSFQIKEIIQNHPNNNNLIEIILDVGRRPEGRFSFGPDYLAVKVISWQDLEYITKRISKFSDDNRAGIERTLHRVSCIRNRQGIIIGLTCRVGRSVVGTINIIRDLLESGNSLLVLGKPGVGKTTVIREISRVLSDEIRKRVVIVDTSNEIAGNSDVPHAGIGRARRMQVSFTQNQHDIMIEAVQNHMPEVIIVDEIGTELEALAARTIAER 225          
BLAST of mRNA_S-dermatodea_contig84059.16576.1 vs. uniprot
Match: A0A2U9NP69_9STRA (AAA domain-containing protein n=1 Tax=Guinardia striata TaxID=1514137 RepID=A0A2U9NP69_9STRA)

HSP 1 Score: 341 bits (875), Expect = 1.410e-113
Identity = 166/225 (73.78%), Postives = 200/225 (88.89%), Query Frame = 1
Query:    1 MNINSNLNQLIQIFSFQIKEIIQNHPNNNNLIEIILDVGRRPEGRFSFGPDYLAVKVISWQDLEYITKRISKFSDDNRAGIERTLHRVSCIRNRQGIIIGLTCRVGRSVVGTINIIRDLLESGNSLLVLGKPGVGKTTVIREISRVLSDEIRKRVVIVDTSNEIAGNSDVPHAGIGRARRMQVSFTQNQHDIMIEAVQNHMPEVIIVDEIGTELEALAARTIAER 675
            M ++ +L +L++   F I+E ++NH N  NLIEI++D+GRRPE RF  GP+YL+ K++SWQDL+Y  KRISKFSDDNRAGIERTLHRVSCIRNRQ +I GLTCRVGR+V GTI+IIRDLLESG S+L+LGKPGVGKTT+IREI+RVLSDE+ KRVVIVDTSNEIAG+SD+PH+GIGRARRMQVS T+ QH +MIEAV+NHMPEVII+DEIGTELEALAA+TIAE+
Sbjct:    1 MTVDEDLEKLLENLPFFIQENLKNHSNKENLIEIVMDLGRRPEARFHSGPEYLSQKIVSWQDLDYTIKRISKFSDDNRAGIERTLHRVSCIRNRQSLINGLTCRVGRAVFGTISIIRDLLESGQSILILGKPGVGKTTIIREIARVLSDEMEKRVVIVDTSNEIAGDSDIPHSGIGRARRMQVSKTELQHQVMIEAVENHMPEVIIIDEIGTELEALAAKTIAEK 225          
BLAST of mRNA_S-dermatodea_contig84059.16576.1 vs. uniprot
Match: A0A0K2RW75_9STRA (Conserved hypothetical plastid protein n=1 Tax=Triparma laevis TaxID=1534972 RepID=A0A0K2RW75_9STRA)

HSP 1 Score: 338 bits (868), Expect = 1.350e-112
Identity = 165/225 (73.33%), Postives = 200/225 (88.89%), Query Frame = 1
Query:    1 MNINSNLNQLIQIFSFQIKEIIQNHPNNNNLIEIILDVGRRPEGRFSFGPDYLAVKVISWQDLEYITKRISKFSDDNRAGIERTLHRVSCIRNRQGIIIGLTCRVGRSVVGTINIIRDLLESGNSLLVLGKPGVGKTTVIREISRVLSDEIRKRVVIVDTSNEIAGNSDVPHAGIGRARRMQVSFTQNQHDIMIEAVQNHMPEVIIVDEIGTELEALAARTIAER 675
            M I+ +L++LI+   F I+E + NHPN N LIEI++D+GRRPE RF  GP+YL+ K+ISWQDL+Y TKRI KFS+DNRAGIERTLHRVSCIRNRQ II GLTCRVGR++ GTI+ +RDLLESG S+L+LGKPGVGKTT+IREI+RVLSDE+ KRV+I+DTSNEIAG+SD+PH+GIGRARRMQVS T+ QH +MIEA++NHMPEVII+DEIGTELE+LAARTIAER
Sbjct:    1 MIIDKDLDKLIENLPFFIRETLYNHPNKNQLIEIVMDLGRRPEARFVVGPEYLSQKLISWQDLDYTTKRIGKFSNDNRAGIERTLHRVSCIRNRQFIINGLTCRVGRAIFGTISGVRDLLESGQSILILGKPGVGKTTMIREIARVLSDEMEKRVIIIDTSNEIAGDSDIPHSGIGRARRMQVSKTELQHQVMIEAIENHMPEVIIIDEIGTELESLAARTIAER 225          
BLAST of mRNA_S-dermatodea_contig84059.16576.1 vs. uniprot
Match: A0A2U9NQC6_9STRA (AAA domain-containing protein n=1 Tax=Actinocyclus subtilis TaxID=1630683 RepID=A0A2U9NQC6_9STRA)

HSP 1 Score: 337 bits (863), Expect = 8.430e-112
Identity = 164/225 (72.89%), Postives = 201/225 (89.33%), Query Frame = 1
Query:    1 MNINSNLNQLIQIFSFQIKEIIQNHPNNNNLIEIILDVGRRPEGRFSFGPDYLAVKVISWQDLEYITKRISKFSDDNRAGIERTLHRVSCIRNRQGIIIGLTCRVGRSVVGTINIIRDLLESGNSLLVLGKPGVGKTTVIREISRVLSDEIRKRVVIVDTSNEIAGNSDVPHAGIGRARRMQVSFTQNQHDIMIEAVQNHMPEVIIVDEIGTELEALAARTIAER 675
            MN+  +L++L++   F I+E ++NH   + LIEI++D+GRRPE RF+ GP YL+ K+ISWQD++Y TKRIS+FSD+NRAGIERTLHR+SCIRNRQ +I GLTCRVGR++ GTI+IIRDLLESG SLL+LGKPGVGKTT+IREI+RVL+DE+ KRV+IVDTSNEIAG+SDVPH+GIGRARRMQVS T+ QH IMIEAV+NHMPEVII+DEIGTELEALAARTIAE+
Sbjct:    1 MNVAEDLDKLLENLPFFIQENLKNHSKKDKLIEIVMDLGRRPEARFTTGPQYLSQKIISWQDIDYTTKRISEFSDENRAGIERTLHRISCIRNRQYLINGLTCRVGRAIFGTISIIRDLLESGQSLLILGKPGVGKTTIIREIARVLADEMEKRVIIVDTSNEIAGDSDVPHSGIGRARRMQVSKTEFQHQIMIEAVENHMPEVIIIDEIGTELEALAARTIAEK 225          
BLAST of mRNA_S-dermatodea_contig84059.16576.1 vs. uniprot
Match: F3Y7B6_FISSO (AAA domain-containing protein n=2 Tax=Fistulifera TaxID=880756 RepID=F3Y7B6_FISSO)

HSP 1 Score: 334 bits (856), Expect = 9.650e-111
Identity = 160/225 (71.11%), Postives = 197/225 (87.56%), Query Frame = 1
Query:    1 MNINSNLNQLIQIFSFQIKEIIQNHPNNNNLIEIILDVGRRPEGRFSFGPDYLAVKVISWQDLEYITKRISKFSDDNRAGIERTLHRVSCIRNRQGIIIGLTCRVGRSVVGTINIIRDLLESGNSLLVLGKPGVGKTTVIREISRVLSDEIRKRVVIVDTSNEIAGNSDVPHAGIGRARRMQVSFTQNQHDIMIEAVQNHMPEVIIVDEIGTELEALAARTIAER 675
            MN+N +L +LI      ++E +  HPN   LIEI+LD+GRRPE RF  GP+YL+ K+ISWQD++Y+TKRISKFS++NRAGIERTLHR+SCIRNRQ +I GLTCRVGR+V GTI+IIRDLLESG S+L+LGKPGVGKTT+IREI+RVL DE+ KRV+I+DTSNEIAG+SD+PH+GIGRARRMQV+ T+ QH +MIEAV+NHMP+VII+DEIGTELE LAARTIAE+
Sbjct:    1 MNVNDDLEKLIDNLPVFLQEHLNQHPNKEQLIEIVLDLGRRPEARFVSGPEYLSQKIISWQDIDYVTKRISKFSNENRAGIERTLHRISCIRNRQFLINGLTCRVGRAVFGTISIIRDLLESGKSILILGKPGVGKTTIIREIARVLGDEMEKRVIIIDTSNEIAGDSDIPHSGIGRARRMQVAKTELQHQVMIEAVENHMPQVIIIDEIGTELEVLAARTIAEK 225          
BLAST of mRNA_S-dermatodea_contig84059.16576.1 vs. uniprot
Match: A0A023HBW6_9STRA (AAA domain-containing protein n=2 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A023HBW6_9STRA)

HSP 1 Score: 333 bits (854), Expect = 1.770e-110
Identity = 159/225 (70.67%), Postives = 202/225 (89.78%), Query Frame = 1
Query:    1 MNINSNLNQLIQIFSFQIKEIIQNHPNNNNLIEIILDVGRRPEGRFSFGPDYLAVKVISWQDLEYITKRISKFSDDNRAGIERTLHRVSCIRNRQGIIIGLTCRVGRSVVGTINIIRDLLESGNSLLVLGKPGVGKTTVIREISRVLSDEIRKRVVIVDTSNEIAGNSDVPHAGIGRARRMQVSFTQNQHDIMIEAVQNHMPEVIIVDEIGTELEALAARTIAER 675
            MN N +L +L++ F F I++ + NHPNN+ LIEII+D+GRRPE RF    +YL+ K++SWQD++YITKRIS+FS++NRAGIERTLHR+SC+RNRQ +I GLTCRVGR+V G+IN+IRDLLESG+S+L+LGKPGVGKTT+IREI+RVLS+E+ KRVVI+DTSNEIAG+SD+PH+GIGRARR+QVS ++ QH +MIEAV+NHMPEVII+DEIGTELEALAAR IAE+
Sbjct:    1 MNANEDLEKLLENFPFFIRQNLINHPNNDQLIEIIMDLGRRPEARFINHSEYLSQKIVSWQDIDYITKRISRFSNENRAGIERTLHRISCMRNRQSVINGLTCRVGRAVFGSINLIRDLLESGHSILILGKPGVGKTTIIREIARVLSEEMEKRVVIIDTSNEIAGDSDIPHSGIGRARRLQVSKSELQHQVMIEAVENHMPEVIIIDEIGTELEALAARAIAEK 225          
BLAST of mRNA_S-dermatodea_contig84059.16576.1 vs. uniprot
Match: A0A023HBN2_9STRA (AAA domain-containing protein n=1 Tax=Coscinodiscus radiatus TaxID=33642 RepID=A0A023HBN2_9STRA)

HSP 1 Score: 333 bits (854), Expect = 2.060e-110
Identity = 159/225 (70.67%), Postives = 199/225 (88.44%), Query Frame = 1
Query:    1 MNINSNLNQLIQIFSFQIKEIIQNHPNNNNLIEIILDVGRRPEGRFSFGPDYLAVKVISWQDLEYITKRISKFSDDNRAGIERTLHRVSCIRNRQGIIIGLTCRVGRSVVGTINIIRDLLESGNSLLVLGKPGVGKTTVIREISRVLSDEIRKRVVIVDTSNEIAGNSDVPHAGIGRARRMQVSFTQNQHDIMIEAVQNHMPEVIIVDEIGTELEALAARTIAER 675
            M+++ +L +L+    F I+E + NH N + L+EI++D+GRRPE RF+ G +YL+ K++SWQD++YITKRIS FSDDNRAGIERTLHR+SCIRNRQ +I GLTCRVGR++ GTI+I+RDLL+SG S+L+LGKPGVGKTT+IREI RVLSDE+ KRV+IVDTSNEIAGNSD+PH+GIGRARRMQV+ T+ QH IMIEAV+NHMPE+II+DEIGTELEALAARTIAE+
Sbjct:    1 MSVDQDLEKLLDNLPFFIQENLTNHRNKDKLVEIVMDLGRRPEARFANGSEYLSQKMVSWQDIDYITKRISHFSDDNRAGIERTLHRISCIRNRQALINGLTCRVGRAIFGTISIVRDLLQSGQSILILGKPGVGKTTIIREIGRVLSDEMGKRVIIVDTSNEIAGNSDIPHSGIGRARRMQVAKTEFQHQIMIEAVENHMPEIIIIDEIGTELEALAARTIAEK 225          
BLAST of mRNA_S-dermatodea_contig84059.16576.1 vs. uniprot
Match: A0A650D0V5_9STRA (Hypothetical chloroplast RF45 n=6 Tax=Thalassiosirales TaxID=33847 RepID=A0A650D0V5_9STRA)

HSP 1 Score: 332 bits (852), Expect = 3.650e-110
Identity = 159/225 (70.67%), Postives = 200/225 (88.89%), Query Frame = 1
Query:    1 MNINSNLNQLIQIFSFQIKEIIQNHPNNNNLIEIILDVGRRPEGRFSFGPDYLAVKVISWQDLEYITKRISKFSDDNRAGIERTLHRVSCIRNRQGIIIGLTCRVGRSVVGTINIIRDLLESGNSLLVLGKPGVGKTTVIREISRVLSDEIRKRVVIVDTSNEIAGNSDVPHAGIGRARRMQVSFTQNQHDIMIEAVQNHMPEVIIVDEIGTELEALAARTIAER 675
            MNI+ +L++L+    F I + + NH + + LIEI+LD+GRRPE RF+ GP+YL+ K+ISWQDL+Y+TKRISKFS +NRAGIERTLHR+SCIRNRQ +I GLTCRVGR++ GTI+IIRDLLESG S+L+LGKPGVGKTT+IREI+R+LSDE+ KRV+I+DTSNEIAG+SDVPH+GIGRARRMQV  T+ QH IM+EA++NHMP+VI++DEIGTELEALAARTIAE+
Sbjct:    1 MNIDDDLDKLLNNLPFFIYQHLNNHSHKDKLIEIVLDLGRRPEARFTTGPEYLSQKIISWQDLDYVTKRISKFSGENRAGIERTLHRISCIRNRQFLINGLTCRVGRAIFGTISIIRDLLESGKSILILGKPGVGKTTIIREIARILSDEMEKRVIIIDTSNEIAGDSDVPHSGIGRARRMQVPKTELQHKIMLEAIENHMPQVIVIDEIGTELEALAARTIAEK 225          
BLAST of mRNA_S-dermatodea_contig84059.16576.1 vs. uniprot
Match: A0A2U9NTM1_9STRA (AAA domain-containing protein n=1 Tax=Acanthoceras zachariasii TaxID=451788 RepID=A0A2U9NTM1_9STRA)

HSP 1 Score: 332 bits (852), Expect = 3.650e-110
Identity = 160/225 (71.11%), Postives = 197/225 (87.56%), Query Frame = 1
Query:    1 MNINSNLNQLIQIFSFQIKEIIQNHPNNNNLIEIILDVGRRPEGRFSFGPDYLAVKVISWQDLEYITKRISKFSDDNRAGIERTLHRVSCIRNRQGIIIGLTCRVGRSVVGTINIIRDLLESGNSLLVLGKPGVGKTTVIREISRVLSDEIRKRVVIVDTSNEIAGNSDVPHAGIGRARRMQVSFTQNQHDIMIEAVQNHMPEVIIVDEIGTELEALAARTIAER 675
            M I+ +L++L+    F IKE + NHP+   L+EI++D+GRRPE RF+ GP+Y++ K+ISWQD+EY TKRISKFS+DNRAGIERTLHR+SCIRNRQ +I GLTCRVGR++ GTI + RD+LESG S+L+LGKPGVGKTT+IREI+RVLSDE+ KRV+IVDTSNEIAG+SD+PH GIGRARRMQVS T  QH +MIEAV+NHMP+VII+DEIGTELEALAARTIAE+
Sbjct:    1 MTIDEDLDKLLDNLPFFIKEHLNNHPHKEKLMEIVMDLGRRPEARFTTGPEYISQKIISWQDIEYTTKRISKFSNDNRAGIERTLHRISCIRNRQFLINGLTCRVGRAIFGTICLARDILESGQSILILGKPGVGKTTIIREIARVLSDEMEKRVIIVDTSNEIAGDSDIPHPGIGRARRMQVSQTDLQHQVMIEAVENHMPQVIIIDEIGTELEALAARTIAEK 225          
BLAST of mRNA_S-dermatodea_contig84059.16576.1 vs. uniprot
Match: A0A8A6KGW5_9STRA (AAA domain-containing protein n=1 Tax=Coscinodiscus wailesii TaxID=671091 RepID=A0A8A6KGW5_9STRA)

HSP 1 Score: 331 bits (849), Expect = 1.100e-109
Identity = 159/225 (70.67%), Postives = 199/225 (88.44%), Query Frame = 1
Query:    1 MNINSNLNQLIQIFSFQIKEIIQNHPNNNNLIEIILDVGRRPEGRFSFGPDYLAVKVISWQDLEYITKRISKFSDDNRAGIERTLHRVSCIRNRQGIIIGLTCRVGRSVVGTINIIRDLLESGNSLLVLGKPGVGKTTVIREISRVLSDEIRKRVVIVDTSNEIAGNSDVPHAGIGRARRMQVSFTQNQHDIMIEAVQNHMPEVIIVDEIGTELEALAARTIAER 675
            M I+ +L +L+    F I+E + NH N + LIEI++D+GRRPE RF+ G +Y++ K++SWQD++YITKRIS FS++NRAGIERTLHR+SCIRNRQ +I GLTCRVGR++ GTI+IIRDLLESG S+L+LGKPGVGKTT+IREI+RVLSDE+ KRV+IVDTSNEIAG+SD+PH+GIGRARRMQV+ T+ QH IMIEAV+NHMPE+II+DEIGTELEALAARTIAE+
Sbjct:    1 MGIDEDLEKLLDNLPFFIQENLNNHANKDKLIEIVMDLGRRPEARFTNGSEYVSQKIVSWQDIDYITKRISHFSNENRAGIERTLHRISCIRNRQSLINGLTCRVGRAIFGTISIIRDLLESGQSILILGKPGVGKTTIIREIARVLSDEMEKRVIIVDTSNEIAGDSDIPHSGIGRARRMQVAKTEFQHQIMIEAVENHMPEIIIIDEIGTELEALAARTIAEK 225          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig84059.16576.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S6ZPA4_9STRA5.900e-151100.00Ycf45 n=1 Tax=Schizocladia ischiensis TaxID=196139... [more]
A0A2U9NP69_9STRA1.410e-11373.78AAA domain-containing protein n=1 Tax=Guinardia st... [more]
A0A0K2RW75_9STRA1.350e-11273.33Conserved hypothetical plastid protein n=1 Tax=Tri... [more]
A0A2U9NQC6_9STRA8.430e-11272.89AAA domain-containing protein n=1 Tax=Actinocyclus... [more]
F3Y7B6_FISSO9.650e-11171.11AAA domain-containing protein n=2 Tax=Fistulifera ... [more]
A0A023HBW6_9STRA1.770e-11070.67AAA domain-containing protein n=2 Tax=Leptocylindr... [more]
A0A023HBN2_9STRA2.060e-11070.67AAA domain-containing protein n=1 Tax=Coscinodiscu... [more]
A0A650D0V5_9STRA3.650e-11070.67Hypothetical chloroplast RF45 n=6 Tax=Thalassiosir... [more]
A0A2U9NTM1_9STRA3.650e-11071.11AAA domain-containing protein n=1 Tax=Acanthoceras... [more]
A0A8A6KGW5_9STRA1.100e-10970.67AAA domain-containing protein n=1 Tax=Coscinodiscu... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig84059contigS-dermatodea_contig84059:3..677 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score326.2
Seed ortholog evalue1.2e-86
Seed eggNOG ortholog35128.Thapsdraft2063
Preferred nameycf45
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0009507,GO:0009536,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044444,GO:0044464
EggNOG free text desc.AAA domain
EggNOG OGs2QQ4X@2759,2XEFS@2836,COG3854@1
COG Functional cat.L
Best tax levelBacillariophyta
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons1
Model size675
Cds size675
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622925340.93149-CDS-S-dermatodea_contig84059:2..6771622925340.93149-CDS-S-dermatodea_contig84059:2..677Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig84059 3..677 -
1694079867.5882215-CDS-S-dermatodea_contig84059:2..6771694079867.5882215-CDS-S-dermatodea_contig84059:2..677Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig84059 3..677 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig84059.16576.1prot_S-dermatodea_contig84059.16576.1Saccorhiza dermatodea SderLu1190fm monoicouspolypeptideS-dermatodea_contig84059 3..677 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-dermatodea_contig84059.16576.1

>prot_S-dermatodea_contig84059.16576.1 ID=prot_S-dermatodea_contig84059.16576.1|Name=mRNA_S-dermatodea_contig84059.16576.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=225bp
MNINSNLNQLIQIFSFQIKEIIQNHPNNNNLIEIILDVGRRPEGRFSFGP
DYLAVKVISWQDLEYITKRISKFSDDNRAGIERTLHRVSCIRNRQGIIIG
LTCRVGRSVVGTINIIRDLLESGNSLLVLGKPGVGKTTVIREISRVLSDE
IRKRVVIVDTSNEIAGNSDVPHAGIGRARRMQVSFTQNQHDIMIEAVQNH
MPEVIIVDEIGTELEALAARTIAER
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mRNA from alignment at S-dermatodea_contig84059:3..677-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-dermatodea_contig84059.16576.1 ID=mRNA_S-dermatodea_contig84059.16576.1|Name=mRNA_S-dermatodea_contig84059.16576.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=675bp|location=Sequence derived from alignment at S-dermatodea_contig84059:3..677- (Saccorhiza dermatodea SderLu1190fm monoicous)
ATGAATATTAATAGTAATTTAAATCAACTTATTCAAATTTTTTCCTTTCA AATTAAAGAAATTATACAAAATCATCCTAATAATAACAATTTAATAGAAA TTATATTAGATGTGGGTCGTCGGCCTGAAGGACGATTTTCTTTTGGTCCC GATTATTTAGCCGTAAAGGTCATATCGTGGCAAGATTTAGAATATATTAC CAAACGAATTAGTAAATTTAGTGATGATAATAGAGCAGGAATAGAACGTA CATTACATCGTGTTAGTTGTATTCGTAATCGTCAAGGAATAATTATTGGA TTAACTTGTCGTGTTGGGAGAAGTGTTGTCGGTACTATTAATATCATTAG AGATTTATTAGAATCAGGCAATTCGTTATTAGTTTTAGGTAAACCAGGGG TTGGAAAAACAACCGTAATAAGAGAAATTAGTCGAGTACTATCTGATGAA ATCCGAAAACGAGTTGTTATTGTTGATACCTCAAATGAAATTGCAGGAAA CAGTGATGTTCCACATGCCGGTATTGGTCGAGCTCGACGTATGCAAGTTT CATTCACCCAAAATCAACACGATATAATGATTGAAGCCGTGCAAAATCAT ATGCCCGAAGTTATTATCGTAGATGAAATAGGTACAGAATTAGAAGCTTT GGCTGCAAGAACTATAGCTGAACGT
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Coding sequence (CDS) from alignment at S-dermatodea_contig84059:3..677-

>mRNA_S-dermatodea_contig84059.16576.1 ID=mRNA_S-dermatodea_contig84059.16576.1|Name=mRNA_S-dermatodea_contig84059.16576.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=1350bp|location=Sequence derived from alignment at S-dermatodea_contig84059:3..677- (Saccorhiza dermatodea SderLu1190fm monoicous)
ATGAATATTAATAGTAATTTAAATCAACTTATTCAAATTTTTTCCTTTCA
AATTAAAGAAATTATACAAAATCATCCTAATAATAACAATTTAATAGAAA
TTATATTAGATGTGGGTCGTCGGCCTGAAGGACGATTTTCTTTTGGTCCC
GATTATTTAGCCGTAAAGGTCATATCGTGGCAAGATTTAGAATATATTAC
CAAACGAATTAGTAAATTTAGTGATGATAATAGAGCAGGAATAGAACGTA
CATTACATCGTGTTAGTTGTATTCGTAATCGTCAAGGAATAATTATTGGA
TTAACTTGTCGTGTTGGGAGAAGTGTTGTCGGTACTATTAATATCATTAG
AGATTTATTAGAATCAGGCAATTCGTTATTAGTTTTAGGTAAACCAGGGG
TTGGAAAAACAACCGTAATAAGAGAAATTAGTCGAGTACTATCTGATGAA
ATCCGAAAACGAGTTGTTATTGTTGATACCTCAAATGAAATTGCAGGAAA
CAGTGATGTTCCACATGCCGGTATTGGTCGAGCTCGACGTATGCAAGTTT
CATTCACCCAAAATCAACACGATATAATGATTGAAGCCGTGCAAAATCAT
ATGCCCGAAGTTATTATCGTAGATGAAATAGGTACAGAATTAGAAGCTTT
GGCTGCAAGAACTATAGCTGAACGTATGAATATTAATAGTAATTTAAATC
AACTTATTCAAATTTTTTCCTTTCAAATTAAAGAAATTATACAAAATCAT
CCTAATAATAACAATTTAATAGAAATTATATTAGATGTGGGTCGTCGGCC
TGAAGGACGATTTTCTTTTGGTCCCGATTATTTAGCCGTAAAGGTCATAT
CGTGGCAAGATTTAGAATATATTACCAAACGAATTAGTAAATTTAGTGAT
GATAATAGAGCAGGAATAGAACGTACATTACATCGTGTTAGTTGTATTCG
TAATCGTCAAGGAATAATTATTGGATTAACTTGTCGTGTTGGGAGAAGTG
TTGTCGGTACTATTAATATCATTAGAGATTTATTAGAATCAGGCAATTCG
TTATTAGTTTTAGGTAAACCAGGGGTTGGAAAAACAACCGTAATAAGAGA
AATTAGTCGAGTACTATCTGATGAAATCCGAAAACGAGTTGTTATTGTTG
ATACCTCAAATGAAATTGCAGGAAACAGTGATGTTCCACATGCCGGTATT
GGTCGAGCTCGACGTATGCAAGTTTCATTCACCCAAAATCAACACGATAT
AATGATTGAAGCCGTGCAAAATCATATGCCCGAAGTTATTATCGTAGATG
AAATAGGTACAGAATTAGAAGCTTTGGCTGCAAGAACTATAGCTGAACGT
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