prot_S-dermatodea_contig84.16571.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig84.16571.1
Unique Nameprot_S-dermatodea_contig84.16571.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length56
Homology
BLAST of mRNA_S-dermatodea_contig84.16571.1 vs. uniprot
Match: D7FT21_ECTSI (PCI domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FT21_ECTSI)

HSP 1 Score: 112 bits (279), Expect = 7.890e-28
Identity = 55/56 (98.21%), Postives = 56/56 (100.00%), Query Frame = 0
Query:    1 QPFSCVELDHVAELIKLPVDKVELKLSQMILDKKLLGILDQGKGQLIIYEEAVGDK 56
            QPFSCVELDHVAELIKLPVDKVELKLSQMILDKKLLGILDQGKGQL+IYEEAVGDK
Sbjct:  364 QPFSCVELDHVAELIKLPVDKVELKLSQMILDKKLLGILDQGKGQLVIYEEAVGDK 419          
BLAST of mRNA_S-dermatodea_contig84.16571.1 vs. uniprot
Match: A0A835YUR1_9STRA (PCI domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUR1_9STRA)

HSP 1 Score: 90.1 bits (222), Expect = 8.240e-20
Identity = 41/56 (73.21%), Postives = 50/56 (89.29%), Query Frame = 0
Query:    1 QPFSCVELDHVAELIKLPVDKVELKLSQMILDKKLLGILDQGKGQLIIYEEAVGDK 56
            +PFSCVE+ H+A+LI LP+DKVE KLSQMILD+KL GILDQG+GQLIIYE++  DK
Sbjct:  367 EPFSCVEIAHIADLIHLPIDKVERKLSQMILDRKLQGILDQGRGQLIIYEDSASDK 422          
BLAST of mRNA_S-dermatodea_contig84.16571.1 vs. uniprot
Match: A0A5D6XUI6_9STRA (PCI domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XUI6_9STRA)

HSP 1 Score: 89.4 bits (220), Expect = 1.540e-19
Identity = 42/56 (75.00%), Postives = 50/56 (89.29%), Query Frame = 0
Query:    1 QPFSCVELDHVAELIKLPVDKVELKLSQMILDKKLLGILDQGKGQLIIYEEAVGDK 56
            QPFSCVE++HVA+LIKLP+ ++ELKLSQMILD K  GILDQGKGQLI+YE A+ DK
Sbjct:  364 QPFSCVEIEHVAKLIKLPLAQIELKLSQMILDHKFHGILDQGKGQLIVYESALEDK 419          
BLAST of mRNA_S-dermatodea_contig84.16571.1 vs. uniprot
Match: K3W9Y5_GLOUD (PCI domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3W9Y5_GLOUD)

HSP 1 Score: 89.0 bits (219), Expect = 2.190e-19
Identity = 42/56 (75.00%), Postives = 49/56 (87.50%), Query Frame = 0
Query:    1 QPFSCVELDHVAELIKLPVDKVELKLSQMILDKKLLGILDQGKGQLIIYEEAVGDK 56
            QPFSCVE+DHVA+LIKLP+ ++ELKLSQMILD K  GILDQGKGQLI+YE  + DK
Sbjct:  374 QPFSCVEIDHVAKLIKLPLAQIELKLSQMILDHKFHGILDQGKGQLIVYESPMEDK 429          
BLAST of mRNA_S-dermatodea_contig84.16571.1 vs. uniprot
Match: A0A662WKF1_9STRA (PCI domain-containing protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WKF1_9STRA)

HSP 1 Score: 86.7 bits (213), Expect = 1.410e-18
Identity = 40/56 (71.43%), Postives = 48/56 (85.71%), Query Frame = 0
Query:    1 QPFSCVELDHVAELIKLPVDKVELKLSQMILDKKLLGILDQGKGQLIIYEEAVGDK 56
            QPFSCVE++HVA+LIKLP+ ++ELKLSQMILD K  GILDQGKGQLI+Y+    DK
Sbjct:  360 QPFSCVEIEHVAKLIKLPLPQIELKLSQMILDHKFHGILDQGKGQLIVYDSPTDDK 415          
BLAST of mRNA_S-dermatodea_contig84.16571.1 vs. uniprot
Match: D0MSF9_PHYIT (26S proteasome non-ATPase regulatory subunit 11, putative n=1 Tax=Phytophthora infestans (strain T30-4) TaxID=403677 RepID=D0MSF9_PHYIT)

HSP 1 Score: 85.1 bits (209), Expect = 3.130e-18
Identity = 40/56 (71.43%), Postives = 48/56 (85.71%), Query Frame = 0
Query:    1 QPFSCVELDHVAELIKLPVDKVELKLSQMILDKKLLGILDQGKGQLIIYEEAVGDK 56
            QPFSCV++ HVA+LIKLP+ ++ELKLSQMILD K  GILDQGKGQLI+Y+  V DK
Sbjct:  271 QPFSCVDIAHVAKLIKLPLPQIELKLSQMILDHKFHGILDQGKGQLIVYDSPVEDK 326          
BLAST of mRNA_S-dermatodea_contig84.16571.1 vs. uniprot
Match: A0A8J9TBQ1_PHATR (Hypothetical protein (Fragment) n=1 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=A0A8J9TBQ1_PHATR)

HSP 1 Score: 81.6 bits (200), Expect = 3.220e-18
Identity = 38/56 (67.86%), Postives = 47/56 (83.93%), Query Frame = 0
Query:    1 QPFSCVELDHVAELIKLPVDKVELKLSQMILDKKLLGILDQGKGQLIIYEEAVGDK 56
            +P+SCVEL H+A +I+LPV  VE KLSQMILD K LGILDQGKGQL++YEE+  D+
Sbjct:   75 EPYSCVELSHIAAMIELPVATVERKLSQMILDGKFLGILDQGKGQLVVYEESDPDE 130          
BLAST of mRNA_S-dermatodea_contig84.16571.1 vs. uniprot
Match: A0A024GEM8_9STRA (PCI domain-containing protein n=2 Tax=Albugo TaxID=65356 RepID=A0A024GEM8_9STRA)

HSP 1 Score: 84.7 bits (208), Expect = 6.980e-18
Identity = 39/56 (69.64%), Postives = 48/56 (85.71%), Query Frame = 0
Query:    1 QPFSCVELDHVAELIKLPVDKVELKLSQMILDKKLLGILDQGKGQLIIYEEAVGDK 56
            QPFSCVE++HVA+LI LP  ++E+KLSQMILD K  GILDQGKGQLI+Y++ V DK
Sbjct:  362 QPFSCVEIEHVAKLINLPSKQIEIKLSQMILDHKFHGILDQGKGQLIVYDDPVEDK 417          
BLAST of mRNA_S-dermatodea_contig84.16571.1 vs. uniprot
Match: A0A7S2B1Q2_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2B1Q2_9STRA)

HSP 1 Score: 84.7 bits (208), Expect = 7.320e-18
Identity = 39/56 (69.64%), Postives = 47/56 (83.93%), Query Frame = 0
Query:    1 QPFSCVELDHVAELIKLPVDKVELKLSQMILDKKLLGILDQGKGQLIIYEEAVGDK 56
            QPFSCVELD +++LI LP++KVE KLSQMILDKK  G LDQG+GQLII+E+   DK
Sbjct:  381 QPFSCVELDRISQLINLPIEKVEKKLSQMILDKKFKGTLDQGRGQLIIFEDEADDK 436          
BLAST of mRNA_S-dermatodea_contig84.16571.1 vs. uniprot
Match: A0A067CQT0_SAPPC (PCI domain-containing protein n=5 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CQT0_SAPPC)

HSP 1 Score: 84.0 bits (206), Expect = 1.320e-17
Identity = 40/56 (71.43%), Postives = 46/56 (82.14%), Query Frame = 0
Query:    1 QPFSCVELDHVAELIKLPVDKVELKLSQMILDKKLLGILDQGKGQLIIYEEAVGDK 56
            QP+SCVE+ HVA LIKLP+ +VE KLSQMILD K  GILDQG+GQLI+YE A  DK
Sbjct:  362 QPYSCVEISHVATLIKLPLPQVETKLSQMILDHKFHGILDQGRGQLIVYESATEDK 417          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig84.16571.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FT21_ECTSI7.890e-2898.21PCI domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A835YUR1_9STRA8.240e-2073.21PCI domain-containing protein n=1 Tax=Tribonema mi... [more]
A0A5D6XUI6_9STRA1.540e-1975.00PCI domain-containing protein n=1 Tax=Pythium bras... [more]
K3W9Y5_GLOUD2.190e-1975.00PCI domain-containing protein n=1 Tax=Globisporang... [more]
A0A662WKF1_9STRA1.410e-1871.43PCI domain-containing protein n=2 Tax=Nothophytoph... [more]
D0MSF9_PHYIT3.130e-1871.4326S proteasome non-ATPase regulatory subunit 11, p... [more]
A0A8J9TBQ1_PHATR3.220e-1867.86Hypothetical protein (Fragment) n=1 Tax=Phaeodacty... [more]
A0A024GEM8_9STRA6.980e-1869.64PCI domain-containing protein n=2 Tax=Albugo TaxID... [more]
A0A7S2B1Q2_9STRA7.320e-1869.64Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A067CQT0_SAPPC1.320e-1771.43PCI domain-containing protein n=5 Tax=Saprolegniac... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.25.40.570coord: 1..56
e-value: 6.0E-20
score: 73.6
NoneNo IPR availablePANTHERPTHR10678:SF226S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 11coord: 1..55
NoneNo IPR availablePANTHERPTHR1067826S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 11/COP9 SIGNALOSOME COMPLEX SUBUNIT 2coord: 1..55
IPR000717Proteasome component (PCI) domainPFAMPF01399PCIcoord: 2..48
e-value: 1.4E-7
score: 32.0
IPR036390Winged helix DNA-binding domain superfamilySUPERFAMILY46785"Winged helix" DNA-binding domaincoord: 2..50

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig84contigS-dermatodea_contig84:44161..44328 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig84.16571.1mRNA_S-dermatodea_contig84.16571.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig84 44161..44328 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig84.16571.1 ID=prot_S-dermatodea_contig84.16571.1|Name=mRNA_S-dermatodea_contig84.16571.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=56bp
QPFSCVELDHVAELIKLPVDKVELKLSQMILDKKLLGILDQGKGQLIIYE
EAVGDK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000717PCI_dom
IPR036390WH_DNA-bd_sf