prot_S-dermatodea_contig83913.16563.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig83913.16563.1
Unique Nameprot_S-dermatodea_contig83913.16563.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length136
Homology
BLAST of mRNA_S-dermatodea_contig83913.16563.1 vs. uniprot
Match: D8LGQ1_ECTSI (Choline transporter-like protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LGQ1_ECTSI)

HSP 1 Score: 129 bits (325), Expect = 1.760e-32
Identity = 72/148 (48.65%), Postives = 89/148 (60.14%), Query Frame = 0
Query:    1 MPSTIRFALLMSGVQVLWCILVGVAASGSMTAFETVEAPNGSSYRAVDCFNVRTDGS------------RSCQCEGDVIVYNSSCVYGGQSLFLKLFWLASFVWGGAVFQNVVAATVAGSVASWWFSPN-DSRPVQGAFYRASHSSFG 135
            MP T R A+LM  VQ LWC++  +AA GS  A ETV AP+GSS+RA+ C +    G              SC C G  I  +  C + G  L L + WL S  WG  V +NVVA TV+GSVASWWF+P  DS PV+GAF+RA+ SSFG
Sbjct:  217 MPWTYRSAILMGIVQFLWCMVAAIAALGSFVALETVAAPDGSSHRAIYCLDFADGGDGGGGGEDVFAAQNSCVCNGTKIS-DGECEFSGLGLPLMMVWLCSMAWGCGVIRNVVACTVSGSVASWWFTPEEDSTPVKGAFHRATTSSFG 363          
BLAST of mRNA_S-dermatodea_contig83913.16563.1 vs. uniprot
Match: D7FHM4_ECTSI (Choline transporter-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHM4_ECTSI)

HSP 1 Score: 127 bits (318), Expect = 4.180e-32
Identity = 73/150 (48.67%), Postives = 90/150 (60.00%), Query Frame = 0
Query:    1 MPSTIRFALLMSGVQVLWCILVGVAASGSMTAFET-VEAPNGSSYRAVDCFNVRTDGSR------------SCQCEGDVIVYNSSCVY--GGQSLFLKLFWLASFVWGGAVFQNVVAATVAGSVASWWFSPNDSRPVQGAFYRASHSSFG 135
            MP TIR AL MS VQV+W +L   AA GS  AF   V   +G++Y +++C ++    S             SC C G+VI  +S C +  G     L  FWL S  W  AV +NVV ATVAGSVASWWFSP D+R V+GAFYRA+HSSFG
Sbjct:   93 MPGTIRLALFMSAVQVVWSMLSASAAWGSFAAFSPMVVGADGTTYSSLECQDIAVPSSPYGGGETTAGSGLSCHCGGEVISSDSGCEFSSGFPRWVLAAFWLGSVTWVIAVLRNVVTATVAGSVASWWFSPGDTRSVRGAFYRATHSSFG 242          
BLAST of mRNA_S-dermatodea_contig83913.16563.1 vs. uniprot
Match: D7FHM6_ECTSI (Choline transporter-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHM6_ECTSI)

HSP 1 Score: 127 bits (319), Expect = 1.650e-31
Identity = 72/150 (48.00%), Postives = 89/150 (59.33%), Query Frame = 0
Query:    1 MPSTIRFALLMSGVQVLWCILVGVAASGSMTAFE-TVEAPNGSSYRAVDCFNVRTDGSR------------SCQCEGDVIVYNSSCVYGG--QSLFLKLFWLASFVWGGAVFQNVVAATVAGSVASWWFSPNDSRPVQGAFYRASHSSFG 135
            MP TIR AL MS VQV+W +L   AA GS  AF   V   +G++Y +++C ++    S             SC C G+VI  +S C + G      L  FWL S  W  AV +NVV ATVAGSVASWWFSP D+  V+GAFYRA+HSSFG
Sbjct:  290 MPGTIRLALFMSAVQVVWSMLSASAAGGSFAAFSPVVVGADGTTYSSLECQDITVPSSPYGGGETTAGSGLSCHCGGEVISSDSGCEFSGGFPRWVLAAFWLGSVTWVIAVLRNVVTATVAGSVASWWFSPGDTSSVRGAFYRATHSSFG 439          
BLAST of mRNA_S-dermatodea_contig83913.16563.1 vs. uniprot
Match: D7FHM5_ECTSI (Choline transporter-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHM5_ECTSI)

HSP 1 Score: 121 bits (304), Expect = 1.460e-30
Identity = 67/151 (44.37%), Postives = 90/151 (59.60%), Query Frame = 0
Query:    1 MPSTIRFALLMSGVQVLWCILVGVAASGSMTAFE-TVEAPNGSSYRAVDCFNV------------RTDGSRSCQCEGDVIVYNSSCVYGG---QSLFLKLFWLASFVWGGAVFQNVVAATVAGSVASWWFSPNDSRPVQGAFYRASHSSFG 135
            MP TI  AL M  ++V+W +L  ++A GS  AF   V + +G++Y  + C ++             T    SC C G+VI  +S C + G   Q   L +FW+ SF+WG  V  +VV ATVAGSVASWWFSP D+  V+GAFYRA+HSSFG
Sbjct:   99 MPGTIYLALFMGAMRVVWFMLSALSAVGSFVAFSPVVVSADGTTYSFLGCQDIVVSSSPYGGGEATTGSGLSCHCGGEVISSDSGCEFSGGGFQRWVLGVFWVGSFIWGLDVLHDVVLATVAGSVASWWFSPGDTNSVRGAFYRATHSSFG 249          
BLAST of mRNA_S-dermatodea_contig83913.16563.1 vs. uniprot
Match: A0A7S3MAD2_9STRA (Choline transporter-like protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MAD2_9STRA)

HSP 1 Score: 61.6 bits (148), Expect = 2.030e-8
Identity = 55/157 (35.03%), Postives = 73/157 (46.50%), Query Frame = 0
Query:    1 MPSTIRFALLMSGVQVLWCILVGVAASGSMTAF-ETVEAPNGSSYRAVDC--------FNVRT--------DGSRSCQCEGDVIVYNSSCV----YGGQSLFLKLFWLASFVWGGAVFQNVVAATVAGSVASWWFSPNDSR-PVQGAFYRASHSSFG 135
            MPS   +ALL  GVQVL+CI+ G+A  G  T+  +T    +G  Y   +C        F++ +        D  R+C C+G   V N SCV    YG    +L L    S  W  AV  NVV  T + +VA WW     S   VQ  F  A+ +S G
Sbjct:  132 MPSIFGYALLAVGVQVLFCIVWGMAVVGYATSNNQTTIHSHGLIYDLGECTTYVYSNTFDIASYGTLTCAGDACRACVCDG-TFVSNHSCVTPKLYGWTYTWLLL----SLFWTSAVISNVVHCTTSAAVAKWWVVGYPSALMVQEGFEAATTTSLG 283          
BLAST of mRNA_S-dermatodea_contig83913.16563.1 vs. uniprot
Match: K3W6P8_GLOUD (Choline transporter-like protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3W6P8_GLOUD)

HSP 1 Score: 58.2 bits (139), Expect = 3.320e-7
Identity = 42/144 (29.17%), Postives = 66/144 (45.83%), Query Frame = 0
Query:    3 STIRFALLMSGVQVLWCILVGVAASGSMTAFETVEAPNGSSYRAVDCFNVRTDGSRSCQCEGDVIVYNSS---CVYGGQSLF--------LKLFWLASFVWGGAVFQNVVAATVAGSVASWWFSPNDSRPVQGAFYRASHSSFG 135
            +T   +L+ + VQ+ W ++  +A  G     +T E+ +G+      C       S   QCE +   Y +    CV     +F           F L SF WG  VF+NV   TVAG+VA++W+S   +     +  RA+ +SFG
Sbjct:  201 TTYCISLVFTVVQIAWVVVWSLALLGVANNMKTDESTSGTLVNGSRC-------SVDSQCESNACQYYNGTRQCVSSMSKVFKGSAETYVAYFFLLVSFYWGLQVFKNVAHTTVAGTVATFWYSSESAGATGASLKRATTTSFG 337          
BLAST of mRNA_S-dermatodea_contig83913.16563.1 vs. uniprot
Match: A0A485L1E1_9STRA (Choline transporter-like protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L1E1_9STRA)

HSP 1 Score: 57.4 bits (137), Expect = 6.160e-7
Identity = 43/140 (30.71%), Postives = 63/140 (45.00%), Query Frame = 0
Query:    2 PSTIRFALLMSGVQVLWCILVGVAASG-SMTAFETVEAPNGSSYRAVD--CFNVRTDGSRSC---QCEGDVIVYNSSCVYGGQSLFLKLFWLASFVWGGAVFQNVVAATVAGSVASWWFSPNDSRPVQGAFYRASHSSFG 135
            PST   A L   +Q++W     ++  G S    ET ++   +   A+   C +     S +C   QC       N+     G S     F L S  WG  VF N++ ATVAG+VA+WWFS +       +  RA+ +S G
Sbjct:  205 PSTYLVAFLFLIIQIVWVFAWSISVVGISNKLTETTDSSVSTGTLAIGRTCSSNAVCASNNCVNRQCSEA----NTFSQLKGSSYAAYFFLLVSLYWGVQVFSNIIHATVAGTVATWWFSQDSKGATGASLGRATTTSLG 340          
BLAST of mRNA_S-dermatodea_contig83913.16563.1 vs. uniprot
Match: A0A397EZJ6_9STRA (Choline transporter-like protein n=7 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397EZJ6_9STRA)

HSP 1 Score: 55.5 bits (132), Expect = 2.910e-6
Identity = 47/144 (32.64%), Postives = 66/144 (45.83%), Query Frame = 0
Query:    2 PSTIRFALLMSGVQVLWCILVGVAASGSMTAFETVEAPNGSSYRAVDCFNVRTDGSRSCQCEGDVIVYNSSCVYGGQSLFLKL---------FWLASFVWGGAVFQNVVAATVAGSVASWWFSPNDSRPVQGAFY-RASHSSFG 135
            PST   A +   VQ+ W  +   A  G          P  +S  A      R   S  C     +  Y +S V    +++ +L         F L SF WG  VF+N++ ATVAG+VA+WWFS +DS+   GA   RA+ +S G
Sbjct:  227 PSTHVVAFVFLLVQIAWVFVWAFAVVGITNKLTENSTPAPTSRTATVASGGRCIASAQC-----LTNYCTSGVCKEPNVYAQLKSTSYVAYFFLLLSFFWGVQVFKNIIHATVAGTVATWWFS-SDSKGATGASLGRATTTSLG 364          
BLAST of mRNA_S-dermatodea_contig83913.16563.1 vs. uniprot
Match: A0A397BUA5_9STRA (Choline transporter-like protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397BUA5_9STRA)

HSP 1 Score: 55.5 bits (132), Expect = 3.020e-6
Identity = 47/144 (32.64%), Postives = 66/144 (45.83%), Query Frame = 0
Query:    2 PSTIRFALLMSGVQVLWCILVGVAASGSMTAFETVEAPNGSSYRAVDCFNVRTDGSRSCQCEGDVIVYNSSCVYGGQSLFLKL---------FWLASFVWGGAVFQNVVAATVAGSVASWWFSPNDSRPVQGAFY-RASHSSFG 135
            PST   A +   VQ+ W  +   A  G          P  +S  A      R   S  C     +  Y +S V    +++ +L         F L SF WG  VF+N++ ATVAG+VA+WWFS +DS+   GA   RA+ +S G
Sbjct:  404 PSTHVVAFVFLLVQIAWVFVWAFAVVGITNKLTENSTPAPTSRTATVASGGRCIASAQC-----LTNYCTSGVCKEPNVYAQLKSTSYVAYFFLLLSFFWGVQVFKNIIHATVAGTVATWWFS-SDSKGATGASLGRATTTSLG 541          
BLAST of mRNA_S-dermatodea_contig83913.16563.1 vs. uniprot
Match: A0A418CRM6_9STRA (Uncharacterized protein (Fragment) n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A418CRM6_9STRA)

HSP 1 Score: 55.5 bits (132), Expect = 3.120e-6
Identity = 47/144 (32.64%), Postives = 66/144 (45.83%), Query Frame = 0
Query:    2 PSTIRFALLMSGVQVLWCILVGVAASGSMTAFETVEAPNGSSYRAVDCFNVRTDGSRSCQCEGDVIVYNSSCVYGGQSLFLKL---------FWLASFVWGGAVFQNVVAATVAGSVASWWFSPNDSRPVQGAFY-RASHSSFG 135
            PST   A +   VQ+ W  +   A  G          P  +S  A      R   S  C     +  Y +S V    +++ +L         F L SF WG  VF+N++ ATVAG+VA+WWFS +DS+   GA   RA+ +S G
Sbjct:  728 PSTHVVAFVFLLVQIAWVFVWAFAVVGITNKLTENSTPAPTSRTATVASGGRCIASAQC-----LTNYCTSGVCKEPNVYAQLKSTSYVAYFFLLLSFFWGVQVFKNIIHATVAGTVATWWFS-SDSKGATGASLGRATTTSLG 865          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig83913.16563.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 13
Match NameE-valueIdentityDescription
D8LGQ1_ECTSI1.760e-3248.65Choline transporter-like protein n=2 Tax=Ectocarpu... [more]
D7FHM4_ECTSI4.180e-3248.67Choline transporter-like protein n=1 Tax=Ectocarpu... [more]
D7FHM6_ECTSI1.650e-3148.00Choline transporter-like protein n=1 Tax=Ectocarpu... [more]
D7FHM5_ECTSI1.460e-3044.37Choline transporter-like protein n=1 Tax=Ectocarpu... [more]
A0A7S3MAD2_9STRA2.030e-835.03Choline transporter-like protein (Fragment) n=1 Ta... [more]
K3W6P8_GLOUD3.320e-729.17Choline transporter-like protein n=1 Tax=Globispor... [more]
A0A485L1E1_9STRA6.160e-730.71Choline transporter-like protein n=1 Tax=Aphanomyc... [more]
A0A397EZJ6_9STRA2.910e-632.64Choline transporter-like protein n=7 Tax=Aphanomyc... [more]
A0A397BUA5_9STRA3.020e-632.64Choline transporter-like protein (Fragment) n=1 Ta... [more]
A0A418CRM6_9STRA3.120e-632.64Uncharacterized protein (Fragment) n=3 Tax=Aphanom... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007603Choline transporter-likePFAMPF04515Choline_transpocoord: 1..135
e-value: 2.6E-17
score: 63.0
IPR007603Choline transporter-likePANTHERPTHR12385CTL TRANSPORTERcoord: 2..135
NoneNo IPR availablePANTHERPTHR12385:SF4PROTEIN PNS1coord: 2..135
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..6
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 27..83
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 7..26
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 115..135
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 84..114
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..26
score: 0.824
NoneNo IPR availableTMHMMTMhelixcoord: 91..113
NoneNo IPR availableTMHMMTMhelixcoord: 7..29

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig83913contigS-dermatodea_contig83913:70..477 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig83913.16563.1mRNA_S-dermatodea_contig83913.16563.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig83913 70..501 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig83913.16563.1 ID=prot_S-dermatodea_contig83913.16563.1|Name=mRNA_S-dermatodea_contig83913.16563.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=136bp
MPSTIRFALLMSGVQVLWCILVGVAASGSMTAFETVEAPNGSSYRAVDCF
NVRTDGSRSCQCEGDVIVYNSSCVYGGQSLFLKLFWLASFVWGGAVFQNV
VAATVAGSVASWWFSPNDSRPVQGAFYRASHSSFG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007603Choline_transptr-like