prot_S-dermatodea_contig839.16562.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig839.16562.1
Unique Nameprot_S-dermatodea_contig839.16562.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length117
Homology
BLAST of mRNA_S-dermatodea_contig839.16562.1 vs. uniprot
Match: A0A6H5L7W0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7W0_9PHAE)

HSP 1 Score: 104 bits (260), Expect = 2.330e-25
Identity = 52/103 (50.49%), Postives = 71/103 (68.93%), Query Frame = 0
Query:   12 PYVAPIRHYSPEQQKMIQAEVAKLLKNGSIRESTSEWAANCSTVRKKDGTMRVVQDFRGLNALLESQSGRLGDLEHIMDEMEGSKCFPNIGLASGFLPLEIYE 114
            P+ A  R  SPE+++MI+AE+ +L+  G IR+S S WAA C  V+KKDGT+R+  D+R LN LL S SG LGD++ I D ++G K F  + LASGF  +EI E
Sbjct:  105 PFAAKQRRVSPEERRMIRAEIQQLVDRGVIRQSMSPWAAQCLCVKKKDGTLRLCIDWRELNKLLVSDSGGLGDMQTIFDGLKGKKYFTQLDLASGFHQMEIAE 207          
BLAST of mRNA_S-dermatodea_contig839.16562.1 vs. uniprot
Match: A0A6H5KAQ6_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAQ6_9PHAE)

HSP 1 Score: 108 bits (269), Expect = 2.670e-25
Identity = 57/116 (49.14%), Postives = 76/116 (65.52%), Query Frame = 0
Query:    1 MRLELKDPNVKPYVAPIRHYSPEQQKMIQAEVAKLLKNGSIRESTSEWAANCSTVRKKDGTMRVVQDFRGLNALLESQSGRLGDLEHIMDEMEGSKCFPNIGLASGFLPLEIYEDD 116
            + L L D    P+ A  R +SPE+++MI+AE+ +LL  G IR S S WAA C  V+KKDGTMR+  D+R LN LL + SG LGD++ I D ++G + F  I LASGF  +EI E D
Sbjct:  165 LELPLIDEFCTPHAAKQRRFSPEERRMIRAEIQQLLDRGIIRPSMSPWAAQCLCVKKKDGTMRLCIDWRVLNKLLVADSGGLGDMQTIFDGLKGKRYFTQIDLASGFHQIEIAEKD 280          
BLAST of mRNA_S-dermatodea_contig839.16562.1 vs. uniprot
Match: A0A6H5KIS6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIS6_9PHAE)

HSP 1 Score: 108 bits (269), Expect = 2.770e-25
Identity = 53/105 (50.48%), Postives = 73/105 (69.52%), Query Frame = 0
Query:   12 PYVAPIRHYSPEQQKMIQAEVAKLLKNGSIRESTSEWAANCSTVRKKDGTMRVVQDFRGLNALLESQSGRLGDLEHIMDEMEGSKCFPNIGLASGFLPLEIYEDD 116
            P+ A  R +SPE+++MI+AE+ +L+  G IR+S S WAA C  V+KKDGT+R+  D+R LN LL S SG LGD++ I D ++G K F  + LASGF  +EI E D
Sbjct:   16 PFAAKQRRFSPEERRMIRAEIQQLVDRGVIRQSMSPWAAQCLCVKKKDGTLRLCIDWRELNKLLVSDSGGLGDMQTIFDGLKGKKYFTQLDLASGFHQMEIAEKD 120          
BLAST of mRNA_S-dermatodea_contig839.16562.1 vs. uniprot
Match: A0A6H5J659_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J659_9PHAE)

HSP 1 Score: 108 bits (270), Expect = 4.040e-25
Identity = 53/105 (50.48%), Postives = 74/105 (70.48%), Query Frame = 0
Query:   12 PYVAPIRHYSPEQQKMIQAEVAKLLKNGSIRESTSEWAANCSTVRKKDGTMRVVQDFRGLNALLESQSGRLGDLEHIMDEMEGSKCFPNIGLASGFLPLEIYEDD 116
            P+ A  R +SPE+++MI+AE+ +L+  G IR+  S WAA CS V+KKDGT+R+  D+R LN LL S SG LGD++ I+D ++G K F  + LASGF  +EI E D
Sbjct:  209 PFAAKQRRFSPEERRMIRAEIQQLVDRGVIRQPMSLWAAQCSCVKKKDGTLRLCIDWRELNKLLVSDSGGLGDMQTILDGLKGKKYFTQLDLASGFHQMEIAEKD 313          
BLAST of mRNA_S-dermatodea_contig839.16562.1 vs. uniprot
Match: A0A6H5JQV6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQV6_9PHAE)

HSP 1 Score: 108 bits (269), Expect = 5.350e-25
Identity = 53/105 (50.48%), Postives = 73/105 (69.52%), Query Frame = 0
Query:   12 PYVAPIRHYSPEQQKMIQAEVAKLLKNGSIRESTSEWAANCSTVRKKDGTMRVVQDFRGLNALLESQSGRLGDLEHIMDEMEGSKCFPNIGLASGFLPLEIYEDD 116
            P+ A  R +SPE+++MI+AE+ +L+  G IR+S S WAA C  V+KKDGT+R+  D+R LN LL S SG LGD++ I D ++G K F  + LASGF  +EI E D
Sbjct:  156 PFAAKQRRFSPEERRMIRAEIQQLVDRGVIRQSMSPWAAQCLCVKKKDGTLRLCIDWRELNKLLVSDSGGLGDMQTIFDGLKGKKYFTQLDLASGFHQMEIAEKD 260          
BLAST of mRNA_S-dermatodea_contig839.16562.1 vs. uniprot
Match: A0A6H5KFK7_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFK7_9PHAE)

HSP 1 Score: 108 bits (269), Expect = 5.620e-25
Identity = 53/105 (50.48%), Postives = 73/105 (69.52%), Query Frame = 0
Query:   12 PYVAPIRHYSPEQQKMIQAEVAKLLKNGSIRESTSEWAANCSTVRKKDGTMRVVQDFRGLNALLESQSGRLGDLEHIMDEMEGSKCFPNIGLASGFLPLEIYEDD 116
            P+ A  R +SPE+++MI+AE+ +L+  G IR+S S WAA C  V+KKDGT+R+  D+R LN LL S SG LGD++ I D ++G K F  + LASGF  +EI E D
Sbjct:  158 PFAAKQRRFSPEERRMIRAEIQQLVDRGVIRQSMSPWAAQCLCVKKKDGTLRLCIDWRELNKLLVSDSGGLGDMQTIFDGLKGKKYFTQLDLASGFHQMEIAEKD 262          
BLAST of mRNA_S-dermatodea_contig839.16562.1 vs. uniprot
Match: A0A6H5KBF4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBF4_9PHAE)

HSP 1 Score: 108 bits (269), Expect = 5.660e-25
Identity = 57/116 (49.14%), Postives = 76/116 (65.52%), Query Frame = 0
Query:    1 MRLELKDPNVKPYVAPIRHYSPEQQKMIQAEVAKLLKNGSIRESTSEWAANCSTVRKKDGTMRVVQDFRGLNALLESQSGRLGDLEHIMDEMEGSKCFPNIGLASGFLPLEIYEDD 116
            + L L D    P+ A  R +SPE+++MI+AE+ +LL  G IR S S WAA C  V+KKDGTMR+  D+R LN LL + SG LGD++ I D ++G + F  I LASGF  +EI E D
Sbjct:  307 LELPLIDEFCTPHAAKQRRFSPEERRMIRAEIQQLLDRGIIRPSMSPWAAQCLCVKKKDGTMRLCIDWRVLNKLLVADSGGLGDMQTIFDGLKGKRYFTQIDLASGFHQIEIAEKD 422          
BLAST of mRNA_S-dermatodea_contig839.16562.1 vs. uniprot
Match: A0A6H5KEH2_9PHAE (RNA-directed DNA polymerase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEH2_9PHAE)

HSP 1 Score: 108 bits (269), Expect = 5.780e-25
Identity = 53/105 (50.48%), Postives = 73/105 (69.52%), Query Frame = 0
Query:   12 PYVAPIRHYSPEQQKMIQAEVAKLLKNGSIRESTSEWAANCSTVRKKDGTMRVVQDFRGLNALLESQSGRLGDLEHIMDEMEGSKCFPNIGLASGFLPLEIYEDD 116
            P+ A  R +SPE+++MI+AE+ +L+  G IR+S S WAA C  V+KKDGT+R+  D+R LN LL S SG LGD++ I D ++G K F  + LASGF  +EI E D
Sbjct:  680 PFAAKQRRFSPEERRMIRAEIQQLVDRGVIRQSMSPWAAQCLCVKKKDGTLRLCIDWRELNKLLVSDSGGLGDMQTIFDGLKGKKYFTQLDLASGFHQMEIAEKD 784          
BLAST of mRNA_S-dermatodea_contig839.16562.1 vs. uniprot
Match: A0A6H5KGF2_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGF2_9PHAE)

HSP 1 Score: 104 bits (260), Expect = 8.630e-24
Identity = 52/105 (49.52%), Postives = 71/105 (67.62%), Query Frame = 0
Query:   12 PYVAPIRHYSPEQQKMIQAEVAKLLKNGSIRESTSEWAANCSTVRKKDGTMRVVQDFRGLNALLESQSGRLGDLEHIMDEMEGSKCFPNIGLASGFLPLEIYEDD 116
            P+ A  R  SPE+++MI+AE+ +L+  G IR+S S WAA C  V+KKDGT+R+  D+R LN LL S SG L D++ I D ++G K F  + LASGF  +EI E D
Sbjct:   81 PFAAKQRRLSPEERRMIRAEIQQLVDRGVIRQSMSAWAAQCLCVKKKDGTLRLCIDWRELNKLLVSDSGGLADMQTIFDGLKGKKYFTQVDLASGFHQMEIAEKD 185          
BLAST of mRNA_S-dermatodea_contig839.16562.1 vs. uniprot
Match: A0A0K0FRB5_STRVS (RNA-directed DNA polymerase n=1 Tax=Strongyloides venezuelensis TaxID=75913 RepID=A0A0K0FRB5_STRVS)

HSP 1 Score: 79.3 bits (194), Expect = 7.650e-15
Identity = 41/105 (39.05%), Postives = 64/105 (60.95%), Query Frame = 0
Query:    8 PNVKPYVAPIRHYSPEQQKMIQAEVAKLLKNGSIRESTSEWAANCSTVRKKDGTMRVVQDFRGLNALLESQSGRLGDLEHIMDEMEGSKCFPNIGLASGFLPLEI 112
            PN +P    +R Y PE+++ +   V  L KNG IR+S S W+     V+KKDGT+R V D+R LN L E +S  L  +E +++++ G+K +  I LA+GF  + +
Sbjct: 1034 PNSQPVRHRLRRYRPEEEEAMMNIVEGLEKNGQIRKSRSSWSFPIIMVKKKDGTLRKVVDYRKLNELTEVESNILPLIEDVLEKVAGNKYYTTIDLAAGFFQIPL 1138          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig839.16562.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L7W0_9PHAE2.330e-2550.49Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KAQ6_9PHAE2.670e-2549.14Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KIS6_9PHAE2.770e-2550.48Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5J659_9PHAE4.040e-2550.48Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JQV6_9PHAE5.350e-2550.48Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KFK7_9PHAE5.620e-2550.48Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5KBF4_9PHAE5.660e-2549.14Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KEH2_9PHAE5.780e-2550.48RNA-directed DNA polymerase n=1 Tax=Ectocarpus sp.... [more]
A0A6H5KGF2_9PHAE8.630e-2449.52Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A0K0FRB5_STRVS7.650e-1539.05RNA-directed DNA polymerase n=1 Tax=Strongyloides ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.10.10.10coord: 8..115
e-value: 5.8E-23
score: 83.3
NoneNo IPR availableGENE3D3.30.70.270coord: 80..107
e-value: 5.8E-23
score: 83.3
NoneNo IPR availablePANTHERPTHR24559FAMILY NOT NAMEDcoord: 8..116
NoneNo IPR availablePANTHERPTHR24559:SF299coord: 8..116
NoneNo IPR availableSUPERFAMILY56672DNA/RNA polymerasescoord: 6..116

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig839contigS-dermatodea_contig839:16256..16606 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig839.16562.1mRNA_S-dermatodea_contig839.16562.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig839 16250..17532 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig839.16562.1 ID=prot_S-dermatodea_contig839.16562.1|Name=mRNA_S-dermatodea_contig839.16562.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=117bp
MRLELKDPNVKPYVAPIRHYSPEQQKMIQAEVAKLLKNGSIRESTSEWAA
NCSTVRKKDGTMRVVQDFRGLNALLESQSGRLGDLEHIMDEMEGSKCFPN
IGLASGFLPLEIYEDD*
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