mRNA_S-dermatodea_contig8386.16558.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig8386.16558.1 vs. uniprot
Match: A0A6H5L471_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L471_9PHAE) HSP 1 Score: 331 bits (849), Expect = 9.910e-97 Identity = 372/662 (56.19%), Postives = 401/662 (60.57%), Query Frame = 1
Query: 1 FPGDAEVPMLEEMWMLCNLYENLLLSQFHLPAEKVQPAHASPPAPADPAPMPNRSSLL--RPSLGKPNGTKPAAAAASAGRNGAPASAGARG------------WLEAPADDTVPVTASGVGXXXXXXXXXXXXXXXXXXXXXXXXVAPPVVRSRREER------------------------GGGQPQP------------------------IAGNPRGVAT--DRGLRESAEGVGGGGRSDDAGRGAPEISEARAPAGKA-----GKGGGSSTVG---------RVVAVGFKSGECAVLDATVTNHPSFLSVLNKGGAYCEGRVTAVRFVPRAGQRLLVAAFSTGDVYTFDINLTKEAPLGPAAEKAATANAASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAXXXGSKRRGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKSDVAGSSGKNSRGREGGXXXXGAPGSERG--FFVERNSVAGANPVSRWGVASDGRDVTEMKFAPCE-VEGRRLVALAALDGAVRVVDYDEQALVGGFKAWFAGILCLDWSPDARYIVTGGEDDAVTMWSLETRNCVFRGEGHRSYVTGVAFDYWTSRRPYYRFTSVGEDGRLGM 1743
FPGD E M EEMWMLCNL E+LLLSQFH+P L+ P L +PNG AAA + +PA A XXXXXXXXXXXXXXXXXXXXXXXX+ PV+RSRREER G G P ++G+ RG + RG + + G GG + G G E A A A G G S VG RVVAVGFKSGECAVLDAT N PSFLSVLNKGGA+CEGRVTAVRFVP AG+RL VAAFSTGD YTFDI L KEAP+G AAEK A XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX G + S XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXX XXXX P S+RG F VERN VAGANPVS W V+SDGR++T M FAP + +GRRLVALAALDG VRVVDYDEQALV GFK+WF GILCLDWSPD RYIVTGGEDDAVT+W +ETR CV RGEGH S+VTGVAFDYWTSRRPYYRFTSVGED RL M
Sbjct: 83 FPGDPEQKMREEMWMLCNLDEHLLLSQFHVPXXXXXXXXXXXXXXXXXXXXXXXXXLVSSNPCLRQPNGMPYTAAANTRAGGASPAKGVAANSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIRQPVMRSRREERVTFHARPTCHDFLRGWEGGRARSAGDGDSSPGXXXXXXXXXXXXXXXXXXXXXSSVSGD-RGAPSRYSRGQPQDSGGTSRGGSGKNGGGGVVEGPGTTASARPARGDEHGDGERSGGVGGRKRRTPVDRVVAVGFKSGECAVLDATTANAPSFLSVLNKGGAHCEGRVTAVRFVPGAGKRLFVAAFSTGDAYTFDIGLEKEAPMGTAAEKVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWGSVIGGR---STQDSIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGAARSLPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPPPSDRGADFMVERNGVAGANPVSMWRVSSDGREITAMVFAPLQQADGRRLVALAALDGVVRVVDYDEQALVAGFKSWFGGILCLDWSPDMRYIVTGGEDDAVTLWCVETRTCVLRGEGHGSWVTGVAFDYWTSRRPYYRFTSVGEDARLCM 740
BLAST of mRNA_S-dermatodea_contig8386.16558.1 vs. uniprot
Match: D7G1Z3_ECTSI (Catabolite repression protein creC n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1Z3_ECTSI) HSP 1 Score: 311 bits (796), Expect = 6.820e-90 Identity = 292/382 (76.44%), Postives = 303/382 (79.32%), Query Frame = 1
Query: 622 VGRVVAVGFKSGECAVLDATVTNHPSFLSVLNKGGAYCEGRVTAVRFVPRAGQRLLVAAFSTGDVYTFDINLTKEAPLGPAAEKAATANAASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAXXXGSKRRGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKSDVAGSSGKNSRGREGGXXXXGAPGSER-------GFFVERNSVAGANPVSRWGVASDGRDVTEMKFAPCE-VEGRRLVALAALDGAVRVVDYDEQALVGGFKAWFAGILCLDWSPDARYIVTGGEDDAVTMWSLETRNCVFRGEGHRSYVTGVAFDYWTSRRPYYRFTSVGEDGRLGM 1743
V RVVAVGFKSGECAVLDAT N PSFLSVLNKGGA+CEGRVTAVRFVP AG RL VAAFSTG YTFDI L KEAP+G AAE XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXX GF VERN VAGANPVSRW V+SDGR++T M FAP + +GRRLVALAALDG VRVVDYDEQALV GFK+WF GILCLDWSPD RYIVTGGEDDAVT+W +ETR CV RGEGH S+VTGVAFDYWTSRRPYYRFTSVGED RL M
Sbjct: 328 VDRVVAVGFKSGECAVLDATTANAPSFLSVLNKGGAHCEGRVTAVRFVPGAGNRLFVAAFSTGAAYTFDIGLDKEAPMGAAAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGFMVERNGVAGANPVSRWRVSSDGREITAMVFAPLQQADGRRLVALAALDGVVRVVDYDEQALVAGFKSWFGGILCLDWSPDGRYIVTGGEDDAVTLWCVETRTCVLRGEGHGSWVTGVAFDYWTSRRPYYRFTSVGEDARLCM 709
BLAST of mRNA_S-dermatodea_contig8386.16558.1 vs. uniprot
Match: A0A836CCN0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCN0_9STRA) HSP 1 Score: 146 bits (368), Expect = 4.080e-33 Identity = 72/141 (51.06%), Postives = 90/141 (63.83%), Query Frame = 1
Query: 1339 VAGANPVSRWGVASDG-----RDVTEMKFAPCEVE--GRRLVALAALDGAVRVVDYDEQALVGGFKAWFAGILCLDWSPDARYIVTGGEDDAVTMWSLETRNCVFRGEGHRSYVTG--------------VAFDYWTSRRP 1698
V G NPV RW V DG + VT + F+P GRRL+A A+ DG +RV+DYD+Q LV GF+ WF G+LC+DWSPD+RY+VTGGEDD+V +WSLET+ CV RG GH +V G VAFD W +R P
Sbjct: 474 VEGQNPVKRWRVCRDGGRRIGQHVTALAFSPDSYRKGGRRLLACASRDGGLRVIDYDKQELVVGFQPWFGGLLCVDWSPDSRYLVTGGEDDSVCLWSLETQQCVMRGTGHGGWVAGXXXXXXXXXXXXXXVAFDPWATRAP 614
BLAST of mRNA_S-dermatodea_contig8386.16558.1 vs. uniprot
Match: I1C9L5_RHIO9 (Uncharacterized protein n=1 Tax=Rhizopus delemar (strain RA 99-880 / ATCC MYA-4621 / FGSC 9543 / NRRL 43880) TaxID=246409 RepID=I1C9L5_RHIO9) HSP 1 Score: 125 bits (315), Expect = 3.380e-28 Identity = 60/145 (41.38%), Postives = 88/145 (60.69%), Query Frame = 1
Query: 1306 SERGFFVER-NSVAGANPVSRWGVASDGRDVTEMKFAPCEVEGRRLVALAALDGAVRVVDYDEQALVGGFKAWFAGILCLDWSPDARYIVTGGEDDAVTMWSLETRNCVFRGEGHRSYVTGVAFDYWTSRRPYYRFTSVGEDGRL 1737
+E F+ R + + NP+S W V+ +G +T+ F+P + +AL DG +R++DY + L F +++ ++C+DWSPD YIVTGG+DD VT+WS R V R +GH+S++TGVAFD W YRF SV ED L
Sbjct: 42 TESQFYATRPHKSSKYNPISYWKVSKEG--LTDFSFSPDGIH----LALTGSDGQLRIIDYRNERLTDIFSSYYGKLVCVDWSPDGHYIVTGGQDDLVTIWSFTERKMVARCQGHKSWITGVAFDPWNCDEQTYRFASVSEDCNL 180
BLAST of mRNA_S-dermatodea_contig8386.16558.1 vs. uniprot
Match: M7NI32_PNEMU (Uncharacterized protein n=1 Tax=Pneumocystis murina (strain B123) TaxID=1069680 RepID=M7NI32_PNEMU) HSP 1 Score: 128 bits (321), Expect = 1.050e-27 Identity = 57/129 (44.19%), Postives = 84/129 (65.12%), Query Frame = 1
Query: 1351 NPVSRWGVASDGRDVTEMKFAPCEVEGRRLVALAALDGAVRVVDYDEQALVGGFKAWFAGILCLDWSPDARYIVTGGEDDAVTMWSLETRNCVFRGEGHRSYVTGVAFDYWTSRRPYYRFTSVGEDGRL 1737
NP+S W + T + F+P VA+A +G ++++DY + + + +W+ G++C+ WSPD +YI+TGGEDD VT+WS R V+R +GH+S+VTGVAFD W + +YRF SVGEDGRL
Sbjct: 348 NPISYWQLYK--HSPTSLSFSPVSCH----VAVAFSNGTLKLIDYKNEKHIDTYHSWYGGLICVCWSPDGQYILTGGEDDLVTIWSFLDRRIVYRCQGHQSWVTGVAFDPWRCNKNHYRFGSVGEDGRL 470
BLAST of mRNA_S-dermatodea_contig8386.16558.1 vs. uniprot
Match: A0A2I1G9A6_9GLOM (WD40 repeat-like protein n=14 Tax=Glomeraceae TaxID=36751 RepID=A0A2I1G9A6_9GLOM) HSP 1 Score: 125 bits (315), Expect = 3.200e-27 Identity = 63/145 (43.45%), Postives = 92/145 (63.45%), Query Frame = 1
Query: 1309 ERGFFVERNSV-AGANPVSRWGVASDGRDVTEMKFAP-CEVEGRRLVALAALDGAVRVVDYDEQALVGGFKAWFAGILCLDWSPDARYIVTGGEDDAVTMWSLETRNCVFRGEGHRSYVTGVAFDYWTSRRPYYRFTSVGEDGRL 1737
E F V R S A NPVS W V+ + VT F+P C+ VA+ ++DG +R++D+ ++ L + ++F G+LC+ WSPD RY++TGG+DD VT+W+ + V R +GH+S+VTGV+FD W YRF SVGED +L
Sbjct: 259 EERFRVSRPSKNAKHNPVSHWQVSK--KSVTAFAFSPDCQH-----VAIVSVDGCLRIIDFVQETLYDTYSSYFGGLLCVCWSPDGRYVLTGGQDDLVTIWAFREQRIVARCQGHQSWVTGVSFDPWRCDERNYRFGSVGEDTKL 396
BLAST of mRNA_S-dermatodea_contig8386.16558.1 vs. uniprot
Match: A0A0L0SCB1_ALLM3 (Uncharacterized protein n=1 Tax=Allomyces macrogynus (strain ATCC 38327) TaxID=578462 RepID=A0A0L0SCB1_ALLM3) HSP 1 Score: 125 bits (313), Expect = 5.030e-27 Identity = 57/133 (42.86%), Postives = 86/133 (64.66%), Query Frame = 1
Query: 1351 NPVSRWGVAS----DGRDVTEMKFAPCEVEGRRLVALAALDGAVRVVDYDEQALVGGFKAWFAGILCLDWSPDARYIVTGGEDDAVTMWSLETRNCVFRGEGHRSYVTGVAFDYWTSRRPYYRFTSVGEDGRL 1737
NP+S W V G+ + ++ F+P + VAL LDG ++VV + E+ L F ++F G+LCL WSPD+R ++TGG+DD +T+WS++ R + R GH S+V+ +AFDYW S YRF SVG+DG++
Sbjct: 101 NPLSVWQVGKFHFGAGKAIVDVSFSP----NGKYVALVGLDGHLQVVKFAEERLTDTFSSFFGGLLCLCWSPDSRLLLTGGQDDLITVWSIQERRVLARCRGHTSWVSSIAFDYWRSDASTYRFGSVGQDGKM 229
BLAST of mRNA_S-dermatodea_contig8386.16558.1 vs. uniprot
Match: A0A8H7V7Z8_9FUNG (Uncharacterized protein n=1 Tax=Mucor saturninus TaxID=64648 RepID=A0A8H7V7Z8_9FUNG) HSP 1 Score: 127 bits (318), Expect = 5.410e-27 Identity = 61/129 (47.29%), Postives = 83/129 (64.34%), Query Frame = 1
Query: 1351 NPVSRWGVASDGRDVTEMKFAPCEVEGRRLVALAALDGAVRVVDYDEQALVGGFKAWFAGILCLDWSPDARYIVTGGEDDAVTMWSLETRNCVFRGEGHRSYVTGVAFDYWTSRRPYYRFTSVGEDGRL 1737
NPVS W V+ G +T++ F+P + +A+ +DG +R++DY + L + ++F + C+DWSPD RYI+TGGEDD VT+WS R V R EGH+S+VTGVAFD W YRF SVGED L
Sbjct: 471 NPVSFWKVSKFG--LTDIAFSPDNMH----LAITGVDGQLRIIDYRNERLNDIYASYFGKLTCVDWSPDGRYILTGGEDDLVTLWSFHERKMVARCEGHKSWVTGVAFDRWRCDEQTYRFGSVGEDCNL 593
BLAST of mRNA_S-dermatodea_contig8386.16558.1 vs. uniprot
Match: A0A0M8MLR5_9BASI (Wd40 repeat-like protein n=1 Tax=Malassezia pachydermatis TaxID=77020 RepID=A0A0M8MLR5_9BASI) HSP 1 Score: 125 bits (315), Expect = 5.600e-27 Identity = 59/139 (42.45%), Postives = 89/139 (64.03%), Query Frame = 1
Query: 1327 ERNSVAGANPVSRWGVASDGRDVTEMKFAPCEVEGRRLVALAALDGAVRVVDYDEQALVGGFKAWFAGILCLDWSPDARYIVTGGEDDAVTMWSLETRNCVFRGEGHRSYVTGVAFDYWTSRRPY--YRFTSVGEDGRL 1737
+R + +G NP++ W VA D +T+M F P +L+A+ + DG +R++D D + LV F ++F G + WSPD R+++TGG+DD +T+W+ + V +GH+S+VTG+AFD W S YRF SVGEDGRL
Sbjct: 319 QRYTSSGVNPIAHWRVARDR--LTDMAFCPTA----QLLAVTSADGCLRLIDMDREVLVRSFASYFGGFTSVCWSPDGRFLLTGGQDDLITIWAPHDAHVVAHAQGHQSFVTGLAFDPWRSNMDTHTYRFASVGEDGRL 451
BLAST of mRNA_S-dermatodea_contig8386.16558.1 vs. uniprot
Match: S2J0Y5_MUCC1 (ANAPC4_WD40 domain-containing protein n=3 Tax=Mucor TaxID=4830 RepID=S2J0Y5_MUCC1) HSP 1 Score: 124 bits (312), Expect = 5.860e-27 Identity = 60/129 (46.51%), Postives = 82/129 (63.57%), Query Frame = 1
Query: 1351 NPVSRWGVASDGRDVTEMKFAPCEVEGRRLVALAALDGAVRVVDYDEQALVGGFKAWFAGILCLDWSPDARYIVTGGEDDAVTMWSLETRNCVFRGEGHRSYVTGVAFDYWTSRRPYYRFTSVGEDGRL 1737
NPVS W ++ G +T+ FAP +G L A+ +DG +R++DY + L F +++ + C+DWSPD RYI+TGGEDD VT+WS + + R GH+S+VTGVAFD W YRF SVGED L
Sbjct: 152 NPVSVWKISDKG--LTDFAFAP---DGMHL-AITGVDGQMRIIDYRNEKLTDVFSSYYGKLTCVDWSPDGRYILTGGEDDLVTLWSFLEKRIIARCPGHKSWVTGVAFDRWRCDDQTYRFGSVGEDCNL 274 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig8386.16558.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig8386.16558.1 >prot_S-dermatodea_contig8386.16558.1 ID=prot_S-dermatodea_contig8386.16558.1|Name=mRNA_S-dermatodea_contig8386.16558.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=574bp MLEEMWMLCNLYENLLLSQFHLPAEKVQPAHASPPAPADPAPMPNRSSLLback to top mRNA from alignment at S-dermatodea_contig8386:3844..9254- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig8386.16558.1 ID=mRNA_S-dermatodea_contig8386.16558.1|Name=mRNA_S-dermatodea_contig8386.16558.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=5411bp|location=Sequence derived from alignment at S-dermatodea_contig8386:3844..9254- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig8386:3844..9254- >mRNA_S-dermatodea_contig8386.16558.1 ID=mRNA_S-dermatodea_contig8386.16558.1|Name=mRNA_S-dermatodea_contig8386.16558.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=3444bp|location=Sequence derived from alignment at S-dermatodea_contig8386:3844..9254- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |