prot_S-dermatodea_contig8367.16540.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig8367.16540.1
Unique Nameprot_S-dermatodea_contig8367.16540.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length433
Homology
BLAST of mRNA_S-dermatodea_contig8367.16540.1 vs. uniprot
Match: D7FNQ8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNQ8_ECTSI)

HSP 1 Score: 349 bits (895), Expect = 1.890e-112
Identity = 222/527 (42.13%), Postives = 271/527 (51.42%), Query Frame = 0
Query:    1 LDGVFGVESAQLASLLLAMFCLAVAPATCAVFLKAFFSDKLQACLQND--RHFAGVFFVLAIKSIPVPARSTRNWCAGRRVHVATAGSPSNVD--------------------ADDIEGRTEDRDNAQRAPLGGEIRSQHKASPVNERHGDGRKDAPEGRPIGGNPSGNQGEGKKGGSSRLSMLELPPRHWMCTTCKKVNILPEKWDGRPEKAIQLVVKRKVVDKQALYGAFKTKFRVPQCAKCQTPFNYTWRNGGPDDRGQQQ---------------------ALGSNTFSAQASA---------GGMGRAVDDNAV-------------------------------------PELWYGRGFRRQLKTYFKPELERPSLSLRGGRYSVGARVACFAGKEAWYPGTVVASRDNNTYDVRYDNGDIAEHVFPHMVRFEPTRTYSGLLCFYYGLALASAVVWPLTGFEYFSGTGSRTEGAL-----IALPALVIGAAGVVAVAAQFWILYGENKGAGPCVAARYATI 433
            +DG   VE   LA+LLL MF  A  PA  A  LK FFS +L++ L  D  R F GVFF LA K++ VPA         RRVH     + S                          I G  ++  + QRAPLGG    +                           S N+     GG+ + + L+LPPRHWMCT CKKVN+LP++W+GR  K + +V+KRK VD +A+YG FKTK  VP C+KC+TPFNY+WRNGG  D   QQ                     A GS T  A ++A         GG+  A     V                                     PELWYGR FRRQL TYFKPEL RP+    G RY VGARVACFAGK+AWYPG V ASR+N+TYDVRYDNGDIA+HVF HM+RFEP    S L C YYGLALA+A  WPL G  YFS T +           +ALPALV+G AG +AVA QFW +Y +N+  G CVA ++A +
Sbjct:    1 MDGAIPVERTHLAALLLVMFAAAAVPAVLAAVLKMFFSVRLRSSLVRDDRRRFVGVFFFLATKAVSVPAFCGGGRLCERRVHALKDDATSTDXXXXXXXXXRDNEAALERGGGGKTIGGDAQEEGDLQRAPLGGSSGRRXXXXXXXXXXXXXXXXX-----XXXXXSANRLA--DGGTRKRTELDLPPRHWMCTVCKKVNMLPDEWNGRAGKDVHVVIKRKAVDTRAMYGLFKTKPGVPLCSKCRTPFNYSWRNGGGSDNLMQQRQQRLLDAALSRPTNAASTAVAAGSATDPALSAAVDGPMDAENGGVAAAAVHRRVLAKAARFIRALCSPCRRRRAASSKPFDGRGGSDAVEEPELWYGREFRRQLMTYFKPELSRPAAG--GERYPVGARVACFAGKDAWYPGAVAASRENDTYDVRYDNGDIAQHVFSHMIRFEPVHADSRLTCCYYGLALAAAAAWPLAGSWYFSSTSAAXXXXXXXXXXVALPALVVGTAGTLAVAFQFWEIYADNRSTGLCVATKFAAV 518          
BLAST of mRNA_S-dermatodea_contig8367.16540.1 vs. uniprot
Match: A0A6H5L3X8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3X8_9PHAE)

HSP 1 Score: 234 bits (597), Expect = 6.650e-68
Identity = 120/199 (60.30%), Postives = 142/199 (71.36%), Query Frame = 0
Query:  240 QQQALGSNTFSAQASAGGMGRAVDDNAVPELWYGRGFRRQLKTYFKPELERPSLSLRGGRYSVGARVACFAGKEAWYPGTVVASRDNNTYDVRYDNGDIAEHVFPHMVRFEPTRTYSGLLCFYYGLALASAVVWPLTGFEYFSGTGSRTEGA-----LIALPALVIGAAGVVAVAAQFWILYGENKGAGPCVAARYATI 433
            +++A  S TF  +  A     AV++   PELWYGR FRRQL TYFKPEL RP+ S  GGRY VGARVACFAGK+AWYPG V ASR+NNTYDVRYDNGDIA+HVF HM+RFEP    S L C YYGLALA+A  WPL G  YFS T + T+ A     L+ALPALV+G AG +AVA Q W +Y +N+  G CVA ++A I
Sbjct:  136 RRRAASSKTFDGRGGAD----AVEE---PELWYGREFRRQLMTYFKPELSRPAAS--GGRYPVGARVACFAGKDAWYPGAVAASRENNTYDVRYDNGDIAQHVFSHMIRFEPVHADSRLTCCYYGLALAAAAAWPLAGSWYFSSTSAATDAATSAAALVALPALVVGTAGTLAVAFQIWEIYADNRSTGLCVATKFAVI 325          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig8367.16540.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FNQ8_ECTSI1.890e-11242.13Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L3X8_9PHAE6.650e-6860.30Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.30.30.140coord: 294..353
e-value: 6.6E-11
score: 43.6
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 417..433
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 34..354
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 393..416
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..33
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 374..392
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 355..373
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..11
NoneNo IPR availableTMHMMTMhelixcoord: 15..37
NoneNo IPR availableTMHMMTMhelixcoord: 392..414
NoneNo IPR availableTMHMMTMhelixcoord: 355..377

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig8367contigS-dermatodea_contig8367:915..2758 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig8367.16540.1mRNA_S-dermatodea_contig8367.16540.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig8367 915..2758 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig8367.16540.1 ID=prot_S-dermatodea_contig8367.16540.1|Name=mRNA_S-dermatodea_contig8367.16540.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=433bp
LDGVFGVESAQLASLLLAMFCLAVAPATCAVFLKAFFSDKLQACLQNDRH
FAGVFFVLAIKSIPVPARSTRNWCAGRRVHVATAGSPSNVDADDIEGRTE
DRDNAQRAPLGGEIRSQHKASPVNERHGDGRKDAPEGRPIGGNPSGNQGE
GKKGGSSRLSMLELPPRHWMCTTCKKVNILPEKWDGRPEKAIQLVVKRKV
VDKQALYGAFKTKFRVPQCAKCQTPFNYTWRNGGPDDRGQQQALGSNTFS
AQASAGGMGRAVDDNAVPELWYGRGFRRQLKTYFKPELERPSLSLRGGRY
SVGARVACFAGKEAWYPGTVVASRDNNTYDVRYDNGDIAEHVFPHMVRFE
PTRTYSGLLCFYYGLALASAVVWPLTGFEYFSGTGSRTEGALIALPALVI
GAAGVVAVAAQFWILYGENKGAGPCVAARYATI
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