prot_S-dermatodea_contig83602.16536.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig83602.16536.1
Unique Nameprot_S-dermatodea_contig83602.16536.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length43
Homology
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BLAST of mRNA_S-dermatodea_contig83602.16536.1 vs. uniprot
Match: A0A6H5L1E0_9PHAE (RRM domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1E0_9PHAE)

HSP 1 Score: 71.2 bits (173), Expect = 2.530e-13
Identity = 32/40 (80.00%), Postives = 37/40 (92.50%), Query Frame = 0 
Query:    4 GPLPPLPEECGADTHPVVVLRNVYTREEVDSDPNFYDDLE 43
            G LPPLPEECGAD HPVVVLR+VYTREE ++DP+F+DDLE
Sbjct:  498 GALPPLPEECGADKHPVVVLRSVYTREESEADPHFFDDLE 537
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BLAST of mRNA_S-dermatodea_contig83602.16536.1 vs. uniprot
Match: D7FR18_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FR18_ECTSI)

HSP 1 Score: 69.3 bits (168), Expect = 5.310e-13
Identity = 31/38 (81.58%), Postives = 36/38 (94.74%), Query Frame = 0 
Query:    6 LPPLPEECGADTHPVVVLRNVYTREEVDSDPNFYDDLE 43
            LPPLPEECGAD HPVVVLR+VYTREE ++DP+F+DDLE
Sbjct:   89 LPPLPEECGADKHPVVVLRSVYTREESEADPHFFDDLE 126
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig83602.16536.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L1E0_9PHAE2.530e-1380.00RRM domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7FR18_ECTSI5.310e-1381.58Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig83602contigS-dermatodea_contig83602:558..686 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig83602.16536.1mRNA_S-dermatodea_contig83602.16536.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig83602 558..686 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig83602.16536.1 ID=prot_S-dermatodea_contig83602.16536.1|Name=mRNA_S-dermatodea_contig83602.16536.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=43bp
MELGPLPPLPEECGADTHPVVVLRNVYTREEVDSDPNFYDDLE
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