prot_S-dermatodea_contig83550.16534.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig83550.16534.1
Unique Nameprot_S-dermatodea_contig83550.16534.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length56
Homology
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BLAST of mRNA_S-dermatodea_contig83550.16534.1 vs. uniprot
Match: D7FNY4_ECTSI (SH2 domain containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNY4_ECTSI)

HSP 1 Score: 69.3 bits (168), Expect = 2.150e-12
Identity = 33/52 (63.46%), Postives = 39/52 (75.00%), Query Frame = 0 
Query:    5 QRVVEVLVDSLSTCVTITGDPGSGKTEMAKQACLYVCERHRFDAIYYADWRK 56
            Q+VV +L+D  + CVTITG+PGSGKTE A QAC YV ERHRFD   +AD  K
Sbjct:  154 QQVVRLLLDERAACVTITGEPGSGKTERAIQACDYVRERHRFDCFLWADCDK 205
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BLAST of mRNA_S-dermatodea_contig83550.16534.1 vs. uniprot
Match: A0A6H5KH01_9PHAE (CHAT domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KH01_9PHAE)

HSP 1 Score: 67.0 bits (162), Expect = 1.400e-11
Identity = 30/51 (58.82%), Postives = 41/51 (80.39%), Query Frame = 0 
Query:    5 QRVVEVLVDSLSTCVTITGDPGSGKTEMAKQACLYVCERHRFDAIYYADWR 55
            Q+VVE+LVD ++ CVT+TG+ GSGK+E A QAC YV  RH FDA+++AD +
Sbjct:  269 QKVVEMLVDPVTACVTVTGEHGSGKSERAIQACDYVRMRHHFDALWWADMK 319
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BLAST of mRNA_S-dermatodea_contig83550.16534.1 vs. uniprot
Match: A0A6H5KC67_9PHAE (SH2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KC67_9PHAE)

HSP 1 Score: 66.6 bits (161), Expect = 1.910e-11
Identity = 31/52 (59.62%), Postives = 39/52 (75.00%), Query Frame = 0 
Query:    5 QRVVEVLVDSLSTCVTITGDPGSGKTEMAKQACLYVCERHRFDAIYYADWRK 56
            Q VV +L+D  + CVT+TG+PGSGKTE+A QAC YV ERH FD+  +AD  K
Sbjct:  251 QFVVRLLLDPQTVCVTVTGEPGSGKTELAIQACDYVRERHHFDSFLWADCDK 302
[Close]
BLAST of mRNA_S-dermatodea_contig83550.16534.1 vs. uniprot
Match: D7FNY6_ECTSI (SH2 domain containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNY6_ECTSI)

HSP 1 Score: 65.1 bits (157), Expect = 6.680e-11
Identity = 30/52 (57.69%), Postives = 38/52 (73.08%), Query Frame = 0 
Query:    5 QRVVEVLVDSLSTCVTITGDPGSGKTEMAKQACLYVCERHRFDAIYYADWRK 56
            Q VV +L+D  + CVT+TGDPGSGKTE+A QAC YV  RH F++  +AD  K
Sbjct:  267 QHVVRLLLDERAACVTVTGDPGSGKTELAIQACDYVRYRHHFNSFLWADCDK 318
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig83550.16534.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7FNY4_ECTSI2.150e-1263.46SH2 domain containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5KH01_9PHAE1.400e-1158.82CHAT domain-containing protein (Fragment) n=1 Tax=... [more]
A0A6H5KC67_9PHAE1.910e-1159.62SH2 domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7FNY6_ECTSI6.680e-1157.69SH2 domain containing protein n=1 Tax=Ectocarpus s... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.300coord: 1..54
e-value: 1.4E-5
score: 26.8
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 16..43

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig83550contigS-dermatodea_contig83550:343..510 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig83550.16534.1mRNA_S-dermatodea_contig83550.16534.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig83550 343..510 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig83550.16534.1 ID=prot_S-dermatodea_contig83550.16534.1|Name=mRNA_S-dermatodea_contig83550.16534.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=56bp
NTAPQRVVEVLVDSLSTCVTITGDPGSGKTEMAKQACLYVCERHRFDAIY
YADWRK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase