prot_S-dermatodea_contig8355.16533.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig8355.16533.1
Unique Nameprot_S-dermatodea_contig8355.16533.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length143
Homology
BLAST of mRNA_S-dermatodea_contig8355.16533.1 vs. uniprot
Match: D8LHP2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LHP2_ECTSI)

HSP 1 Score: 123 bits (309), Expect = 6.250e-30
Identity = 63/72 (87.50%), Postives = 66/72 (91.67%), Query Frame = 0
Query:    1 AAAVAALDESVRGRLEGLVRPDELDPFEVRALGKFEVADAMDILDRFAEADLRRVRNRSGFLAGIMRKHGSA 72
            AA VAALD  VRGRL  LV+PDELDPFEVRALGKF+ ADA+DILDRFAEADLRRVRNRSGFLAGIMRKHGSA
Sbjct:  998 AATVAALDADVRGRLSELVKPDELDPFEVRALGKFDTADALDILDRFAEADLRRVRNRSGFLAGIMRKHGSA 1069          
BLAST of mRNA_S-dermatodea_contig8355.16533.1 vs. uniprot
Match: A0A835ZCK8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCK8_9STRA)

HSP 1 Score: 80.5 bits (197), Expect = 7.410e-15
Identity = 45/81 (55.56%), Postives = 57/81 (70.37%), Query Frame = 0
Query:    3 AVAALDESVRGRL-----EGLVRPDELDPFEVRALGKFEVADAMDILDRFAEADLRRVRNRSGFLAGIMRKHGSAASTTKP 78
            A+ AL E VR  +     + L++  ELD FE+RAL +FE  DA+ IL+RFAEADLR+V N+SGFLAGIMRK+GS    T P
Sbjct: 1089 ALRALPEEVRAYIVKLQDDRLLKATELDAFELRALSRFEPDDALRILERFAEADLRKVGNKSGFLAGIMRKYGSTLQATAP 1169          
BLAST of mRNA_S-dermatodea_contig8355.16533.1 vs. uniprot
Match: A0A7S2AI36_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2AI36_9STRA)

HSP 1 Score: 56.2 bits (134), Expect = 4.710e-7
Identity = 31/68 (45.59%), Postives = 44/68 (64.71%), Query Frame = 0
Query:    6 ALDESVRGRL-----EGLVRPDELDPFEVRALGKFEVADAMDILDRFAEADLRRVRNRSGFLAGIMRK 68
            AL   +R RL     EGL+  DEL  +E++ LG   + DA++ +  FAEADL+ + N+SG LAGIMR+
Sbjct:   74 ALPSKIRARLDALCNEGLLGQDELAVYELQTLGTLGLDDALEAVRCFAEADLQTIGNKSGLLAGIMRR 141          
BLAST of mRNA_S-dermatodea_contig8355.16533.1 vs. uniprot
Match: A0A7S1HRM5_9EUGL (Hypothetical protein (Fragment) n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1HRM5_9EUGL)

HSP 1 Score: 52.8 bits (125), Expect = 2.200e-5
Identity = 26/56 (46.43%), Postives = 37/56 (66.07%), Query Frame = 0
Query:   16 EGLVRPDELDPFEVRALGKFEVADAMDILDRFAEADLRRVRNRSGFLAGIMRKHGS 71
            +G V  DELDP  + +L +F       IL++F EADL R+ N++GF+AGIMR+  S
Sbjct:  113 QGTVGRDELDPRILESLAQFPADVGESILEKFLEADLSRITNKNGFMAGIMRRFRS 168          
BLAST of mRNA_S-dermatodea_contig8355.16533.1 vs. uniprot
Match: A0A6U1AHC6_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A6U1AHC6_9STRA)

HSP 1 Score: 52.8 bits (125), Expect = 3.350e-5
Identity = 29/71 (40.85%), Postives = 43/71 (60.56%), Query Frame = 0
Query:    3 AVAALDESVRGRLEGLVRP-----DELDPFEVRALGKFEVADAMDILDRFAEADLRRVRNRSGFLAGIMRK 68
            A++ +   VR  LE LVR      +ELD FE+ AL   E+   + ++  F E+DLR+  N+SG LAGI+R+
Sbjct:  965 ALSGMLPQVREALEALVRQRLVKLEELDTFELTALAALELEQGLQVVAAFGESDLRKAGNKSGMLAGILRR 1035          
BLAST of mRNA_S-dermatodea_contig8355.16533.1 vs. uniprot
Match: A0A7S0LZI5_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0LZI5_9CRYP)

HSP 1 Score: 52.0 bits (123), Expect = 5.250e-5
Identity = 29/64 (45.31%), Postives = 41/64 (64.06%), Query Frame = 0
Query:   10 SVRGRLEGLV-----RPDELDPFEVRALGKFEVADAMDILDRFAEADLRRVRNRSGFLAGIMRK 68
            SVR RLE L      R DE+D   +++L +F  A A+ IL  F EAD+  +RN+S FLAG+M++
Sbjct:   96 SVRERLEALFASGKCRRDEIDFKIMQSLSEFSEASALQILINFGEADMSSIRNKSAFLAGVMKR 159          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig8355.16533.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D8LHP2_ECTSI6.250e-3087.50Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835ZCK8_9STRA7.410e-1555.56Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2AI36_9STRA4.710e-745.59Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
A0A7S1HRM5_9EUGL2.200e-546.43Hypothetical protein (Fragment) n=1 Tax=Eutreptiel... [more]
A0A6U1AHC6_9STRA3.350e-540.85Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S0LZI5_9CRYP5.250e-545.31Hypothetical protein (Fragment) n=1 Tax=Cryptomona... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR041337Heterogeneous nuclear ribonucleoprotein Q acidic domainPFAMPF18360hnRNP_Q_AcDcoord: 16..68
e-value: 8.2E-13
score: 48.1

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig8355contigS-dermatodea_contig8355:1739..2936 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig8355.16533.1mRNA_S-dermatodea_contig8355.16533.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig8355 1739..2936 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig8355.16533.1 ID=prot_S-dermatodea_contig8355.16533.1|Name=mRNA_S-dermatodea_contig8355.16533.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=143bp
AAAVAALDESVRGRLEGLVRPDELDPFEVRALGKFEVADAMDILDRFAEA
DLRRVRNRSGFLAGIMRKHGSAASTTKPTAAATTPLSTTTDDTAAGATPT
DAGTAAGAQAMTGERDAVTAAKVPQAEAGVVPPAPPTVAEEGN
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR041337hnRNP_Q_AcD