prot_S-dermatodea_contig83412.16524.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig83412.16524.1
Unique Nameprot_S-dermatodea_contig83412.16524.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length84
Homology
BLAST of mRNA_S-dermatodea_contig83412.16524.1 vs. uniprot
Match: A0A7S6U9S9_9STRA (50S ribosomal protein L27, chloroplastic n=1 Tax=Schizocladia ischiensis TaxID=196139 RepID=A0A7S6U9S9_9STRA)

HSP 1 Score: 165 bits (418), Expect = 7.820e-52
Identity = 82/83 (98.80%), Postives = 83/83 (100.00%), Query Frame = 0
Query:    1 LAHKKGAGSTKNGRDSNSKRLGVKCFGGHKVSAGSIIVRQRGLTFKPGINVGVGKDYTIYALKSGLVYFNTKKNKKIISIKCL 83
            +AHKKGAGSTKNGRDSNSKRLGVKCFGGHKVSAGSIIVRQRGLTFKPGINVGVGKDYTIYALKSGLVYFNTKKNKKIISIKCL
Sbjct:    1 MAHKKGAGSTKNGRDSNSKRLGVKCFGGHKVSAGSIIVRQRGLTFKPGINVGVGKDYTIYALKSGLVYFNTKKNKKIISIKCL 83          
BLAST of mRNA_S-dermatodea_contig83412.16524.1 vs. uniprot
Match: A0A6P0NBT8_9CYAN (50S ribosomal protein L27 n=1 Tax=Moorena sp. SIO3C2 TaxID=2607842 RepID=A0A6P0NBT8_9CYAN)

HSP 1 Score: 125 bits (313), Expect = 7.730e-36
Identity = 57/81 (70.37%), Postives = 72/81 (88.89%), Query Frame = 0
Query:    1 LAHKKGAGSTKNGRDSNSKRLGVKCFGGHKVSAGSIIVRQRGLTFKPGINVGVGKDYTIYALKSGLVYFNTKKNKKIISIK 81
            +AHKKGAGSTKNGRDS +KRLGVKCF GH+V AG+IIVRQRGL+FKPG  +GVGKDYT+YALK G+V++ T+K+K  ++I+
Sbjct:    1 MAHKKGAGSTKNGRDSKAKRLGVKCFSGHRVGAGNIIVRQRGLSFKPGAQIGVGKDYTLYALKEGVVFYKTQKSKIFVTIE 81          
BLAST of mRNA_S-dermatodea_contig83412.16524.1 vs. uniprot
Match: A0A8F0F6S3_AKKLU (Ribosomal protein L27 n=2 Tax=Phaeophyceae TaxID=2870 RepID=A0A8F0F6S3_AKKLU)

HSP 1 Score: 123 bits (308), Expect = 4.600e-35
Identity = 58/80 (72.50%), Postives = 68/80 (85.00%), Query Frame = 0
Query:    1 LAHKKGAGSTKNGRDSNSKRLGVKCFGGHKVSAGSIIVRQRGLTFKPGINVGVGKDYTIYALKSGLVYFNTKKNKKIISI 80
            +AHKKGAGSTKNGRDS SKRLGVKCF GHKV AG+I++RQRGL++KPG NVG+G+DYT+YALK GLV F  K  K  IS+
Sbjct:    1 MAHKKGAGSTKNGRDSKSKRLGVKCFQGHKVQAGNILIRQRGLSYKPGENVGIGRDYTLYALKEGLVSFKKKNKKTCISV 80          
BLAST of mRNA_S-dermatodea_contig83412.16524.1 vs. uniprot
Match: A0A2I4Q2P8_9PHAE (50S ribosomal protein L27 n=1 Tax=Dictyopteris divaricata TaxID=156996 RepID=A0A2I4Q2P8_9PHAE)

HSP 1 Score: 123 bits (308), Expect = 4.600e-35
Identity = 57/80 (71.25%), Postives = 70/80 (87.50%), Query Frame = 0
Query:    1 LAHKKGAGSTKNGRDSNSKRLGVKCFGGHKVSAGSIIVRQRGLTFKPGINVGVGKDYTIYALKSGLVYFNTKKNKKIISI 80
            +AHKKGAGSTKNGRDSNSKRLGVKCF G KV AG+I++RQRGL FKPG++VGVGKDYT+YALK G+  ++ KK + ++SI
Sbjct:    1 MAHKKGAGSTKNGRDSNSKRLGVKCFHGQKVQAGNILIRQRGLHFKPGLHVGVGKDYTLYALKQGMTVYSLKKKETVVSI 80          
BLAST of mRNA_S-dermatodea_contig83412.16524.1 vs. uniprot
Match: A0A2R4QPT1_9PHAE (50S ribosomal protein L27 n=3 Tax=Fucaceae TaxID=3010 RepID=A0A2R4QPT1_9PHAE)

HSP 1 Score: 122 bits (305), Expect = 1.320e-34
Identity = 58/80 (72.50%), Postives = 66/80 (82.50%), Query Frame = 0
Query:    1 LAHKKGAGSTKNGRDSNSKRLGVKCFGGHKVSAGSIIVRQRGLTFKPGINVGVGKDYTIYALKSGLVYFNTKKNKKIISI 80
            +AHKKGAGSTKNGRDS  KRLGVKCF GH+V AG+I++RQRGLTFKPG NVG+GKDYT+YALK G+VYF        ISI
Sbjct:    1 MAHKKGAGSTKNGRDSKPKRLGVKCFHGHQVKAGNILIRQRGLTFKPGDNVGIGKDYTLYALKEGMVYFKKSNTTTSISI 80          
BLAST of mRNA_S-dermatodea_contig83412.16524.1 vs. uniprot
Match: A0A0R6MBY3_UNDPI (50S ribosomal protein L27, chloroplastic n=23 Tax=Laminariales TaxID=2886 RepID=A0A0R6MBY3_UNDPI)

HSP 1 Score: 121 bits (304), Expect = 1.990e-34
Identity = 58/80 (72.50%), Postives = 68/80 (85.00%), Query Frame = 0
Query:    1 LAHKKGAGSTKNGRDSNSKRLGVKCFGGHKVSAGSIIVRQRGLTFKPGINVGVGKDYTIYALKSGLVYFNTKKNKKIISI 80
            +AHKKGAGSTKNGRDS SKRLGVKCF GH V AG+I++RQRGL+FKPG NVG+GKDYT+YAL +GLV F  KK +  IS+
Sbjct:    1 MAHKKGAGSTKNGRDSKSKRLGVKCFQGHPVEAGNILIRQRGLSFKPGDNVGIGKDYTLYALTAGLVSFKKKKKQTCISV 80          
BLAST of mRNA_S-dermatodea_contig83412.16524.1 vs. uniprot
Match: A0A8F0F794_9PHAE (Ribosomal protein L27 n=1 Tax=Protohalopteris sp. TaxID=2843287 RepID=A0A8F0F794_9PHAE)

HSP 1 Score: 120 bits (302), Expect = 3.790e-34
Identity = 57/75 (76.00%), Postives = 65/75 (86.67%), Query Frame = 0
Query:    1 LAHKKGAGSTKNGRDSNSKRLGVKCFGGHKVSAGSIIVRQRGLTFKPGINVGVGKDYTIYALKSGLVYFNTKKNK 75
            +AHKKGAGSTKNGRDS SKRLGVKCF GH+V AG+I++RQRGL+FKPG NVG GKDYT+YALK G V+F  KK K
Sbjct:    1 MAHKKGAGSTKNGRDSKSKRLGVKCFQGHQVQAGNILIRQRGLSFKPGENVGTGKDYTLYALKEGSVFFQKKKKK 75          
BLAST of mRNA_S-dermatodea_contig83412.16524.1 vs. uniprot
Match: B2XTB2_HETAK (50S ribosomal protein L2 n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=B2XTB2_HETAK)

HSP 1 Score: 120 bits (302), Expect = 4.770e-34
Identity = 58/81 (71.60%), Postives = 69/81 (85.19%), Query Frame = 0
Query:    1 LAHKKGAGSTKNGRDSNSKRLGVKCFGGHKVSAGSIIVRQRGLTFKPGINVGVGKDYTIYALKSGLVYFNTKKNKKIISIK 81
            +AHKKGAGSTKNGRDSNSKRLGVKCF  HKVS GSII+RQRGL  K G N+G+GKD+T+YAL++GLV F   +NK I+SI+
Sbjct:    1 MAHKKGAGSTKNGRDSNSKRLGVKCFQNHKVSKGSIIIRQRGLRVKAGENIGIGKDFTLYALEAGLVKFKKSRNKTIVSIE 81          
BLAST of mRNA_S-dermatodea_contig83412.16524.1 vs. uniprot
Match: A0A8F0F9K0_9PHAE (Ribosomal protein L27 n=2 Tax=Laminariales TaxID=2886 RepID=A0A8F0F9K0_9PHAE)

HSP 1 Score: 120 bits (300), Expect = 7.860e-34
Identity = 58/80 (72.50%), Postives = 66/80 (82.50%), Query Frame = 0
Query:    1 LAHKKGAGSTKNGRDSNSKRLGVKCFGGHKVSAGSIIVRQRGLTFKPGINVGVGKDYTIYALKSGLVYFNTKKNKKIISI 80
            +AHKKGAGSTKNGRDS SKRLGVKCF GH V AG+I++RQRGL+FKPG NVGVG+DYT+YALK GLV F     K  IS+
Sbjct:    1 MAHKKGAGSTKNGRDSKSKRLGVKCFQGHPVQAGNILIRQRGLSFKPGSNVGVGRDYTLYALKEGLVSFKKVNKKTCISV 80          
BLAST of mRNA_S-dermatodea_contig83412.16524.1 vs. uniprot
Match: A0A6B7EYQ0_9PHAE (50S ribosomal protein L27 n=1 Tax=Cladosiphon okamuranus TaxID=309737 RepID=A0A6B7EYQ0_9PHAE)

HSP 1 Score: 120 bits (302), Expect = 8.860e-34
Identity = 57/80 (71.25%), Postives = 67/80 (83.75%), Query Frame = 0
Query:    1 LAHKKGAGSTKNGRDSNSKRLGVKCFGGHKVSAGSIIVRQRGLTFKPGINVGVGKDYTIYALKSGLVYFNTKKNKKIISI 80
            +AHKKGAGSTKNGRDSNSKRLGVKCF GHKV AGSI++RQRG TF+PG NVG+G+DYT+YA   GLV F  K+ K  +S+
Sbjct:    1 MAHKKGAGSTKNGRDSNSKRLGVKCFHGHKVQAGSILIRQRGETFEPGKNVGIGRDYTLYASVDGLVSFKKKRRKTFVSV 80          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig83412.16524.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S6U9S9_9STRA7.820e-5298.8050S ribosomal protein L27, chloroplastic n=1 Tax=S... [more]
A0A6P0NBT8_9CYAN7.730e-3670.3750S ribosomal protein L27 n=1 Tax=Moorena sp. SIO3... [more]
A0A8F0F6S3_AKKLU4.600e-3572.50Ribosomal protein L27 n=2 Tax=Phaeophyceae TaxID=2... [more]
A0A2I4Q2P8_9PHAE4.600e-3571.2550S ribosomal protein L27 n=1 Tax=Dictyopteris div... [more]
A0A2R4QPT1_9PHAE1.320e-3472.5050S ribosomal protein L27 n=3 Tax=Fucaceae TaxID=3... [more]
A0A0R6MBY3_UNDPI1.990e-3472.5050S ribosomal protein L27, chloroplastic n=23 Tax=... [more]
A0A8F0F794_9PHAE3.790e-3476.00Ribosomal protein L27 n=1 Tax=Protohalopteris sp. ... [more]
B2XTB2_HETAK4.770e-3471.6050S ribosomal protein L2 n=2 Tax=Heterosigma akash... [more]
A0A8F0F9K0_9PHAE7.860e-3472.50Ribosomal protein L27 n=2 Tax=Laminariales TaxID=2... [more]
A0A6B7EYQ0_9PHAE8.860e-3471.2550S ribosomal protein L27 n=1 Tax=Cladosiphon okam... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001684Ribosomal protein L27PRINTSPR00063RIBOSOMALL27coord: 29..53
score: 56.92
coord: 54..78
score: 39.69
coord: 4..28
score: 70.77
IPR001684Ribosomal protein L27TIGRFAMTIGR00062TIGR00062coord: 2..80
e-value: 1.6E-33
score: 112.6
IPR001684Ribosomal protein L27PFAMPF01016Ribosomal_L27coord: 2..80
e-value: 5.1E-36
score: 122.5
IPR001684Ribosomal protein L27PANTHERPTHR15893RIBOSOMAL PROTEIN L27coord: 2..80
IPR001684Ribosomal protein L27HAMAPMF_00539Ribosomal_L27coord: 1..83
score: 25.622
NoneNo IPR availableGENE3D2.40.50.1030coord: 6..82
e-value: 2.7E-26
score: 93.7
NoneNo IPR availablePRODOMPD003114coord: 29..69
e-value: 3.0E-11
score: 159.0
NoneNo IPR availableSUPERFAMILY110324Ribosomal L27 protein-likecoord: 2..79
IPR018261Ribosomal protein L27, conserved sitePROSITEPS00831RIBOSOMAL_L27coord: 34..48

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig83412contigS-dermatodea_contig83412:174..425 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig83412.16524.1mRNA_S-dermatodea_contig83412.16524.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig83412 174..425 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig83412.16524.1 ID=prot_S-dermatodea_contig83412.16524.1|Name=mRNA_S-dermatodea_contig83412.16524.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=84bp
LAHKKGAGSTKNGRDSNSKRLGVKCFGGHKVSAGSIIVRQRGLTFKPGIN
VGVGKDYTIYALKSGLVYFNTKKNKKIISIKCL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001684Ribosomal_L27
IPR018261Ribosomal_L27_CS