prot_S-dermatodea_contig834.16523.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig834.16523.1
Unique Nameprot_S-dermatodea_contig834.16523.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length832
Homology
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BLAST of mRNA_S-dermatodea_contig834.16523.1 vs. uniprot
Match: D7G985_ECTSI (EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G985_ECTSI)

HSP 1 Score: 59.3 bits (142), Expect = 1.120e-5
Identity = 23/43 (53.49%), Postives = 31/43 (72.09%), Query Frame = 0 
Query:    1 MVDVNSRLCDHQGCYKHASYGTDGSRRTEFCSEHKSAGMVNVA 43
            M+DV  + C H GC K  SYGTDGS++ EFC++H   GMV++A
Sbjct:    1 MIDVVCKRCGHLGCMKRPSYGTDGSKKREFCAQHSQQGMVSMA 43
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig834.16523.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G985_ECTSI1.120e-553.49EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 777..797
NoneNo IPR availableCOILSCoilCoilcoord: 673..714

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig834contigS-dermatodea_contig834:8251..22422 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig834.16523.1mRNA_S-dermatodea_contig834.16523.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig834 8034..23359 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig834.16523.1 ID=prot_S-dermatodea_contig834.16523.1|Name=mRNA_S-dermatodea_contig834.16523.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=832bp
MVDVNSRLCDHQGCYKHASYGTDGSRRTEFCSEHKSAGMVNVACKPCAYQ
GCFKLPSFGREGSTKKKFCSDHKKAGMVNVTGRRCAHQGCHMRPFFGTEG
SRRAEFCIEHKRAGMVDVFNKRCSHQGCDKKPSCGSEGSRKEAFCPKHER
AGMANVACKPCAYRGCFKIPPFGREGSRKKEFCSKHKMAGMVDISRKKCA
SEGCAEFAAYGLDGSRRKPLLCFRHLTQGHQAGASPVEAAKSSAEAKEMG
EEASGQAAFPNRRERVLRGEGFPRPVQKASGSLDCGPVTGKRIRAPEREK
RGPSQEAQQVSALFLESSPTRSPTGCTPLASQDTSDQSRATHSLGLDDEA
TSREPKRYTRSGCGRDDVRDLPIDSCVAPAKPAQQIPTQGIARTDTGEGE
VTESTGITASVDPALARCGGDERDDAGDGDVLITSRFAGAERNVSTTSGQ
GRRHIRKSCASELRGLRKMASLKKRKREAEAEVSAPVLESSPTQSPTGCT
PLASQDSSDQSRGAYLCEADPKRSECWRCGAEYNVSNASREGRRHIRKSC
ASELRDLRKMASLKKIKREAVAEDTSDQSRGAEQNVSTPAREGRRHIRKS
CASELRGLRKMASLKKRKREAVAEDSSDQSRGAYLCKADPKPFECWRCFD
RSLQGRRHIRKSSASDLQDLRKIASLKKGKREAVAEVNNLRDEVEELKKQ
VADAAVDRAHAVDEATGKVEDEFTEISQALRDELGAASRGSKDSKGALEA
VCEERKAVRLQIQAQVAAAASKIKAEAAKTEKVQEDFQQRMKALRAELSA
TSTASGNTSDDLKQIRQERDPLHEEGQARER*
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