prot_S-dermatodea_contig83215.16507.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig83215.16507.1
Unique Nameprot_S-dermatodea_contig83215.16507.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length69
Homology
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BLAST of mRNA_S-dermatodea_contig83215.16507.1 vs. uniprot
Match: D7FWU4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWU4_ECTSI)

HSP 1 Score: 74.3 bits (181), Expect = 1.580e-14
Identity = 39/71 (54.93%), Postives = 51/71 (71.83%), Query Frame = 0 
Query:    4 SDDAEFLTMLVPSGALDWGASSIAVRSALNATAADSGG--------VEGGGAWVEIECRVLNARLVQDVAF 66
            S D+EFLTMLVPS ALDWG S++AVR++LN T+   GG             +WVEI+C++L+ARLVQDV+F
Sbjct:  165 SSDSEFLTMLVPSSALDWGPSTLAVRASLNGTSDGDGGRGATAGXXXXXXSSWVEIDCQILSARLVQDVSF 235
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BLAST of mRNA_S-dermatodea_contig83215.16507.1 vs. uniprot
Match: A0A6H5KBR4_9PHAE (Protein CASP (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBR4_9PHAE)

HSP 1 Score: 64.3 bits (155), Expect = 2.180e-10
Identity = 34/65 (52.31%), Postives = 46/65 (70.77%), Query Frame = 0 
Query:    4 SDDAEFLTMLVPSGALDWGASSIAVRSALNATAADSGGVEGGG------AWVEIECRVLNARLVQ 62
            S D+EFLTMLVPS +LDWG S++AVR++LN T+   G            +WVEI+C++L+ARLVQ
Sbjct: 1238 SSDSEFLTMLVPSSSLDWGPSTLAVRASLNGTSDSDGXXXXXXXXXXXXSWVEIDCQILSARLVQ 1302
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig83215.16507.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FWU4_ECTSI1.580e-1454.93Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KBR4_9PHAE2.180e-1052.31Protein CASP (Fragment) n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig83215contigS-dermatodea_contig83215:139..345 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig83215.16507.1mRNA_S-dermatodea_contig83215.16507.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig83215 120..409 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig83215.16507.1 ID=prot_S-dermatodea_contig83215.16507.1|Name=mRNA_S-dermatodea_contig83215.16507.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=69bp
MRFSDDAEFLTMLVPSGALDWGASSIAVRSALNATAADSGGVEGGGAWVE
IECRVLNARLVQDVAFLA*
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