mRNA_S-dermatodea_contig832.16504.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig832.16504.1 vs. uniprot
Match: D8LEU7_ECTSI (Cysteine desulfurase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LEU7_ECTSI) HSP 1 Score: 272 bits (696), Expect = 3.230e-87 Identity = 133/166 (80.12%), Postives = 157/166 (94.58%), Query Frame = 1
Query: 1 HQVGSVQPIEQIAGACRRRGILCHTDAAQSIGKVSVKVRDLGVDMLTIVGHKFGAPKGVAALFVRRGLALPPMVHGGGQEAGRRAGTENVLLISGMGKAAEVVNFELDRLSQHLSVMRERLLEHLLSANLADEVRVHGPRNPSMRLPNTLSIGIPGLEARILLEKL 498
++VGS+QPI +IA ACR+RGI+CHTDAAQSIGKV VKV DLGVDMLT+VGHKFGAPKGVAALFVRRGLALPPM+HGGGQEAGRRAGTENVLLISGMGKAAE+V+ EL+RLS+HL+ MRERLLE L++A+L D V+VHGPR+PS+RLPNTLSIG+PG+EAR+LLE++
Sbjct: 258 NEVGSLQPITEIAEACRQRGIMCHTDAAQSIGKVPVKVADLGVDMLTLVGHKFGAPKGVAALFVRRGLALPPMIHGGGQEAGRRAGTENVLLISGMGKAAEIVDVELERLSKHLAAMRERLLELLMAADLGDGVKVHGPRSPSLRLPNTLSIGLPGVEARVLLERV 423
BLAST of mRNA_S-dermatodea_contig832.16504.1 vs. uniprot
Match: A0A2P6TKZ5_CHLSO (Cysteine desulfurase n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TKZ5_CHLSO) HSP 1 Score: 241 bits (615), Expect = 4.060e-75 Identity = 124/209 (59.33%), Postives = 163/209 (77.99%), Query Frame = 1
Query: 1 HQVGSVQPIEQIAGACRRRGILCHTDAAQSIGKVSVKVRDLGVDMLTIVGHKFGAPKGVAALFVRRGLALPPMVHGGGQEAGRRAGTENVLLISGMGKAAEVVNFELDRLSQHLSVMRERLLEHLLSANLADEVRVHGPRNPSMRLPNTLSIGIPGLEARILLEKLSETVAASAGSACHAGGTTMSGVLQAMGVDNSTGFGTLRFSVGR 627
++VGS+QP+ +A A R+RG+L H DAAQSIGKV V V+ LGVDMLTIVGHKFGAPKGVAAL++RRG+A+ ++ GGGQE GRRAGTENVLL++G+GKAA++V+ EL + H+ +R+ L LL+ A R++GP + + RLPNTLSIGI G++A LL +LSE +AASAG+ACH+GG ++S VL+AMGV + GTLR SVGR
Sbjct: 186 NEVGSLQPVADVAAAARQRGVLVHCDAAQSIGKVPVDVQQLGVDMLTIVGHKFGAPKGVAALYIRRGVAIERLLCGGGQEGGRRAGTENVLLLAGLGKAADLVSQELPATAAHMRALRDSLQSQLLAGLPAGAARINGPSDDAQRLPNTLSIGIKGIQASALLAELSEQLAASAGAACHSGGQSVSAVLRAMGVPHEHALGTLRLSVGR 394
BLAST of mRNA_S-dermatodea_contig832.16504.1 vs. uniprot
Match: E1ZDB8_CHLVA (Aminotran_5 domain-containing protein n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1ZDB8_CHLVA) HSP 1 Score: 224 bits (572), Expect = 9.650e-69 Identity = 120/210 (57.14%), Postives = 154/210 (73.33%), Query Frame = 1
Query: 1 HQVGSVQPIEQIAGACRRRGILCHTDAAQSIGKVSVKVRDLGVDMLTIVGHKFGAPKGVAALFVRRGLALPPMVHGGGQEAGRRAGTENVLLISGMGKAAEVVNFELDRLSQHLSVMRERLLEHLLSANLADEVRVHGPRNPSMRLPNTLSIGIPGLEARILLEKLSETVAASAGSACHAGGTT-MSGVLQAMGVDNSTGFGTLRFSVGR 627
++VGS+QP+ Q+A RR G L H DAAQS+GKV V V+ LGVDMLT+V HKFG PKGVAAL+VRRG+ L ++ GGGQE GRRAGTENV+L++G+GKAAE+V+ EL + H++ MR+ L + LL+ +HGP + ++RLPNTLSIGI G+ A LL +LSE +AASAG+ACH+GG +S VLQAM V GTLR S GR
Sbjct: 177 NEVGSIQPVAQLAALARRAGALMHCDAAQSLGKVDVDVQQLGVDMLTVVAHKFGGPKGVAALYVRRGVRLERLLCGGGQEGGRRAGTENVVLVAGLGKAAELVSRELPATAAHMAAMRDSLQQQLLAGLPPSTALIHGPADDALRLPNTLSIGIRGIAAARLLAELSEQLAASAGAACHSGGGHGVSAVLQAMAVPTEHAVGTLRLSTGR 386
BLAST of mRNA_S-dermatodea_contig832.16504.1 vs. uniprot
Match: A0A2P6V8I3_9CHLO (Cysteine desulfurase isoform A n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6V8I3_9CHLO) HSP 1 Score: 221 bits (562), Expect = 3.220e-67 Identity = 118/209 (56.46%), Postives = 156/209 (74.64%), Query Frame = 1
Query: 1 HQVGSVQPIEQIAGACRRRGILCHTDAAQSIGKVSVKVRDLGVDMLTIVGHKFGAPKGVAALFVRRGLALPPMVHGGGQEAGRRAGTENVLLISGMGKAAEVVNFELDRLSQHLSVMRERLLEHLLSANLADEVRVHGPRNPSMRLPNTLSIGIPGLEARILLEKLSETVAASAGSACHAGGTTMSGVLQAMGVDNSTGFGTLRFSVGR 627
++VGS+ P+ ++A R+RGIL H+DAAQS+GKV V V LGVD LTIVGHKFGAPKGVAALFVRRG+ L ++ GGGQE G+RAGTE+VLL++G+G AA VV EL + H++ +R+ L + LL+ R++GP + + RLPNTLSIGI G++A LL +LS+ +AASAG+ACH+GG ++S VL+AM V GTLR SVGR
Sbjct: 184 NEVGSILPVAELAALARQRGILLHSDAAQSLGKVEVDVTRLGVDALTIVGHKFGAPKGVAALFVRRGVHLERLLCGGGQEGGQRAGTESVLLLAGLGAAAAVVAAELPATAAHMAALRDSLQQQLLAGLPPGTARINGPSDAARRLPNTLSIGIAGIQASALLAELSQQLAASAGAACHSGGGSVSAVLRAMQVPLPHALGTLRLSVGR 392
BLAST of mRNA_S-dermatodea_contig832.16504.1 vs. uniprot
Match: A0A7S4C1G4_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4C1G4_CHRCT) HSP 1 Score: 214 bits (545), Expect = 5.170e-66 Identity = 118/212 (55.66%), Postives = 151/212 (71.23%), Query Frame = 1
Query: 1 HQVGSVQPIEQIAGACRRR--GILCHTDAAQSIGKVSVKVRDLGVDMLTIVGHKFGAPKGVAALFVRRGLALPPMVHGGGQEAGRRAGTENVLLISGMGKAAEVVNFELDRLSQHLSVMRERLLEHLLSANLADEVRVHGPRNPSMRLPNTLSIGIPGLEARILLEKLSETVAASAGSACHAG-GTTMSGVLQAMGVDNSTGFGTLRFSVGR 627
++VGSVQPI +I+ + +L HTDAAQSIGKV + VR+LGVDMLT+VGHK GAPKGV AL+VR GL LPP++HGGGQEAGRRAGTE+VLL++ +G AA + +L LS+H+ R+RL + SA + RV+GP N + RLPNTLSIG+ G+ A LL L + +AASAG+ACH+ T+S VL+AM V GTLR S GR
Sbjct: 66 NEVGSVQPIAEISSMVKSEMPHVLIHTDAAQSIGKVPIDVRELGVDMLTLVGHKMGAPKGVGALYVRAGLKLPPLLHGGGQEAGRRAGTESVLLLAALGAAATIARTDLVPLSRHMRATRDRLAYRITSALGPNATRVNGPHNDAQRLPNTLSIGLKGVSAAELLHTLRDQLAASAGAACHSQEAATVSAVLRAMRVPREYALGTLRLSTGR 277
BLAST of mRNA_S-dermatodea_contig832.16504.1 vs. uniprot
Match: A4S300_OSTLU (Aminotran_5 domain-containing protein n=2 Tax=Ostreococcus sp. 'lucimarinus' TaxID=242159 RepID=A4S300_OSTLU) HSP 1 Score: 213 bits (542), Expect = 2.600e-64 Identity = 124/220 (56.36%), Postives = 152/220 (69.09%), Query Frame = 1
Query: 1 HQVGSVQPIEQIAGACRRRGILCHTDAAQSIGKVSVKVRDLGVDMLTIVGHKFGAPKGVAALFVRRGLALPPM--VHGGGQEAGRRAGTENVLLISGMGKAAEVVNFELDRLSQHLSVMRERLLEHLLSANLADE---VRVHGPRNPSMRLPNTLSIGIPGLEARILLEKLSETVAASAGSACH------AGGTTMSGVLQAMGVDNSTGFGTLRFSVGR 627
++ G++QP+ +IA R RG+L HTDAAQS GKV VKV LGVDM TIVGHK GAPKGV AL++RRG L +GGGQE+GRRAGTENVL I G+GKA E+V E+D +HL MR+ L + L+ A + VRV+GPR+ RLPNTL+IGI GL A I L +LSE +AASAG+ACH +GG T+S VL+AM V GTLR SVGR
Sbjct: 159 NETGAIQPVAEIARRARERGVLTHTDAAQSAGKVPVKVDALGVDMATIVGHKIGAPKGVGALYIRRGTDLGDAKPFYGGGQESGRRAGTENVLHIVGLGKACEIVEREMDTCPKHLKAMRDDLQKRLVDALGGTDGSGVRVNGPRDDDKRLPNTLNIGIKGLLASITLMELSELLAASAGAACHTPDAATSGGATVSSVLEAMNVPMEYAVGTLRLSVGR 378
BLAST of mRNA_S-dermatodea_contig832.16504.1 vs. uniprot
Match: R1CHP5_EMIHU (Cysteine desulfurase NFS1 n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1CHP5_EMIHU) HSP 1 Score: 210 bits (534), Expect = 4.540e-63 Identity = 117/211 (55.45%), Postives = 146/211 (69.19%), Query Frame = 1
Query: 1 HQVGSVQPIEQIAGACR--RRGILCHTDAAQSIGKVSVKVRDLGVDMLTIVGHKFGAPKGVAALFVRRGLALPPMVHGGGQEAGRRAGTENVLLISGMGKAAEVVNFELDRLSQHLSVMRERLLEHLLSANLADEVRVHGPRNPSMRLPNTLSIGIPGLEARILLEKLSETVAASAGSACHAGGTTMSGVLQAMGVDNSTGFGTLRFSVGR 627
++VGSVQP+ QIA A R R +L HTDAAQSIGKV V R LGVD+LT+VGHKFGAPKG+AAL++R GLALP M+HGGGQE+GRRAGTE ++ +G AA + E L +H+ R+ L L+ A RV+GP + S RLPNTLSIG+ + A LLE LSE +AASAG+ACHA ++S VL+A+ V GTLR S GR
Sbjct: 161 NEVGSVQPVRQIADAVRALRPSVLVHTDAAQSIGKVDVDTRALGVDLLTLVGHKFGAPKGIAALYIRSGLALPRMIHGGGQESGRRAGTECTPMVVALGTAAAIARAEAAPLREHMRRTRDALESALVERLPAGSTRVNGPADASRRLPNTLSIGLRDVRAAELLETLSERLAASAGAACHANAASVSAVLRALRVPPEFAVGTLRLSTGR 371
BLAST of mRNA_S-dermatodea_contig832.16504.1 vs. uniprot
Match: D8U8R1_VOLCA (Uncharacterized protein n=1 Tax=Volvox carteri f. nagariensis TaxID=3068 RepID=D8U8R1_VOLCA) HSP 1 Score: 206 bits (525), Expect = 7.230e-62 Identity = 121/234 (51.71%), Postives = 154/234 (65.81%), Query Frame = 1
Query: 1 HQVGSVQPIEQIAGACRR---------------------RGILCHTDAAQSIGKVSVKVRDLGVDMLTIVGHKFGAPKGVAALFVRRGLALPPMVHGGGQEAGRRAGTENVLLISGMGKAAEVVNFELDRLSQHLSVMRERLLEHL---LSANLADEVRVHGPRNPSMRLPNTLSIGIPGLEARILLEKLSETVAASAGSACHAG-GTTMSGVLQAMGVDNSTGFGTLRFSVGR 627
++VG+VQPI +IA A RR G+L H+DAAQS GKV + VR LGVD LTIVGHKFGAPKGVAAL++RRG+ L HGGGQE GRRAGTEN++ + G+G AAE+ E RL +HL M ERL+E L L D++R++GPR P+ RLPNTLS+ I GL + + L++LS +AASAG+ACH+G ++S VL+AM V GTLR S GR
Sbjct: 138 NEVGAVQPIAEIAAAARRAHARFTXXXXXXXXXXGCTGTNGLLVHSDAAQSTGKVELDVRTLGVDALTIVGHKFGAPKGVAALYIRRGVHLDNYFHGGGQEGGRRAGTENIMQVVGLGAAAELARREGPRLRRHLGDMAERLMEALRAGLRPEDQDKLRLNGPRQPASRLPNTLSLSIRGLNSAVALQRLSGQLAASAGAACHSGEAASVSAVLRAMRVPFEFAAGTLRLSTGR 371
BLAST of mRNA_S-dermatodea_contig832.16504.1 vs. uniprot
Match: C1EHB0_MICCC (Aminotran_5 domain-containing protein (Fragment) n=1 Tax=Micromonas commoda (strain RCC299 / NOUM17 / CCMP2709) TaxID=296587 RepID=C1EHB0_MICCC) HSP 1 Score: 206 bits (523), Expect = 1.080e-61 Identity = 116/216 (53.70%), Postives = 146/216 (67.59%), Query Frame = 1
Query: 1 HQVGSVQPIEQIAGACRRRG--ILCHTDAAQSIGKVSVKVRDLGVDMLTIVGHKFGAPKGVAALFVRRGLALPPMVHGGGQEAGRRAGTENVLLISGMGKAAEVVNFELDRLSQHLSVMRERLLEHLLSANLADE---VRVHGPRNPSMRLPNTLSIGIPGLEARILLEKLSETVAASAGSACHAG--GTTMSGVLQAMGVDNSTGFGTLRFSVGR 627
++ G++QP+ + A R + +L HTDAAQS GK+ VKV DLGVDM T+VGHK GAPKGVAAL+V ++HGGGQE+GRRAGTENVL I G+G A E+V E D L H+S MR+ L L S D+ VRV+GPR+ + RLPNTLS+GI G+ A LL+ L + VAASAG+ACH+G ++S VL AM V GTLR SVGR
Sbjct: 162 NETGAIQPVAECARLAREKNEDVLIHTDAAQSCGKIPVKVNDLGVDMCTVVGHKIGAPKGVAALYVASAAPFSKLLHGGGQESGRRAGTENVLEIVGLGAACELVEREKDILPSHMSAMRDELSRRLASGLGGDDGSGVRVNGPRDDAKRLPNTLSVGIKGVSASQLLDVLKDDVAASAGAACHSGEAAASVSAVLSAMAVPEEYAIGTLRLSVGR 377
BLAST of mRNA_S-dermatodea_contig832.16504.1 vs. uniprot
Match: A0A836CMI1_9STRA (Pyridoxal phosphate-dependent transferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMI1_9STRA) HSP 1 Score: 206 bits (523), Expect = 1.860e-61 Identity = 116/224 (51.79%), Postives = 154/224 (68.75%), Query Frame = 1
Query: 1 HQVGSVQPIEQIAGACRRRGILCHTDAAQSIGKVSVKVRDLGVDMLTIVGHKFGAPKGVAALFVRRGLA--LPPMVHGGGQEAGRRAGTENVLLISGMGKAAEVVNFELDRLSQHLSVMRERLL----EHLLSANLADEVRVHGPRNPSMRLPNTLSIGIPGLEARILLEKLSETVAASAGSACH---AGGTT------MSGVLQAMGVDNSTGFGTLRFSVGR 627
++VGS+QP+ ++A CR RGILCHTDAAQS+GKV + VR+LGVDMLTIVGHKFGAPKG+AAL++RR + PP + GGGQE G+RAGTE+ +I G+GKA ++ E D + H+ +R+ LL L L+ RVHGP + + RLPNTLSI + G+ A LL+++ + AASAG+ACH A G+ +S VL+AMGV S GT+R SVGR
Sbjct: 160 NEVGSLQPVAEVARLCRERGILCHTDAAQSLGKVKIDVRELGVDMLTIVGHKFGAPKGIAALYIRREVLADFPPFLLGGGQEGGKRAGTESTAMIVGLGKACQIALDEADATTAHMRKLRDLLLASLGRRLPPGTLS---RVHGPSDVARRLPNTLSIAVDGIRAAPLLKRIGDRFAASAGAACHSKPADGSAAADCPKISAVLRAMGVPPSLAVGTIRLSVGR 380 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig832.16504.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig832.16504.1 >prot_S-dermatodea_contig832.16504.1 ID=prot_S-dermatodea_contig832.16504.1|Name=mRNA_S-dermatodea_contig832.16504.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=210bp HQVGSVQPIEQIAGACRRRGILCHTDAAQSIGKVSVKVRDLGVDMLTIVGback to top mRNA from alignment at S-dermatodea_contig832:319..2672+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig832.16504.1 ID=mRNA_S-dermatodea_contig832.16504.1|Name=mRNA_S-dermatodea_contig832.16504.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=2354bp|location=Sequence derived from alignment at S-dermatodea_contig832:319..2672+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig832:319..2672+ >mRNA_S-dermatodea_contig832.16504.1 ID=mRNA_S-dermatodea_contig832.16504.1|Name=mRNA_S-dermatodea_contig832.16504.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=1260bp|location=Sequence derived from alignment at S-dermatodea_contig832:319..2672+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |