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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Ec32 ortholog description | expressed unknown protein |
| Ec32 ortholog | Ec-16_004600.1 |
| Exons | 2 |
| Model size | 1032 |
| Cds size | 960 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig8306.16494.1 >prot_S-dermatodea_contig8306.16494.1 ID=prot_S-dermatodea_contig8306.16494.1|Name=mRNA_S-dermatodea_contig8306.16494.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=320bp
MPDPNSTRAGHSRGNGDSTASNPFFDLCWLLGGKRTRTSDVSSPDNRGSC
PVQMGGGKRRNSPPATKAEDVLRVWDSVLPPPICTESVRTAPISTCSEST
LSRAASWSDTNVGSEGAGIIVCGRLHSSSEDHNRRCDAEEEPLTVVQGVC
GAQGVAVGASFTSPAGPIDIPIRLEDAEPESALHEALRQSLGAMEMRMSL
NSARGTRHGRRPSGDGRPCQTTTSVGDSASRTIGLPVGSPNETSSRDGGS
GSGLSGPSSFWQSGPSTGGHMFDGPSPSDPFGEGSFFAESSTPRSAIRDS
CATGREGCDDSELIFDFEA* back to topmRNA from alignment at S-dermatodea_contig8306:3793..5948- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_S-dermatodea_contig8306.16494.1 ID=mRNA_S-dermatodea_contig8306.16494.1|Name=mRNA_S-dermatodea_contig8306.16494.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=2156bp|location=Sequence derived from alignment at S-dermatodea_contig8306:3793..5948- (Saccorhiza dermatodea SderLu1190fm monoicous)
GGCAGAGCGGAGCGCAGGGGTCGGGCTGCCATTTCCCTCGCCCTCCGCTA
TGCCGGATCCAAACAGCACCCGCGCTGGCCACAGCAGGGGCAACGGTGAT
TCCACGGCGTCAAACCCGTTCTTCGATTTATGTTGGCTGCTCGGAGGAAA
GCGCACGAGGACAAGCGATGTGTCGTCTCCAGATAACCGAGGAAGCTGCC
CGGTTCAGATGGGAGGAGGCAAGCGACGGAACTCTCCGCCCGCAACGAAA
GCGGAAGACGTTCTCAGAGTCTGGGATAGCGTGCTCCCACCACCGATCTG
CACGGAGAGCGTCAGGACGGCGCCGATCAGTACCTGCTCCGAGTCCACGT
TGTCGCGCGCCGCGTCCTGGTCGGACACGAACGTGGGGAGCGAGGGAGCC
GGAATAATCGTCTGCGGGAGGCTGCACTCATCATCCGAGGACCATAACCG
GCGCTGTGACGCCGAGGAAGAGCCGCTAACGGTGGTGCAAGGCGTCTGTG
GTGCACAGGGCGTGGCCGTGGGTGCCTCTTTCACTTCTCCGGCGGGGCCC
ATCGACATCCCCATTCGGTTGGAGGATGCTGAGCCCGAGAGCGCGCTGCA
TGAGGTGGGTCCCTTGTTGTTGCGCTCGGCAGCAGAGGCGCATGAATGTG
TGTTGTTGCGTTGTCTGGCCGGAAATTGATTGCCTCATTCTTATCCACCT
CCGCTTTCCCCTCCCCCGGATACATGCAGAAGTGACAAGACAGAAATAGG
CCTTGCTCGCAGTGTGCTTGCTAGTCGTGGTTGCCTCCCTGCTTTGCTCA
GTTCCTAGGTGGCATTGCACAGCCGCCTCTTGCGCAGCGTCTGCGGTTCG
GAAAAGGCGGGTTGAAGGGTTCCCCACACTACACAACGGTCCCCGGGCAT
GGCCGTGAGATGCCAAACCCATGATGGGAAAGTTAGTCCGCAGAACATAC
TCAGCGCCCTTGGTGGGTGCCAGCGGTTGCCCCTCTGCCCATAACCCCCC
CCCTCATACCCCCTCATACCCCCCCCCGCCCCCTCCGCATCCCCTACCCC
CATCCTTCGACGTAGCCCAATGCAGAGCGGGTTATAGTACTCTGTCATGT
CGCAGCGAACTTCTTGTGTGCATGTGGTGTTCGTTTCCAACGTCTATCAT
CCCCTGATGTTTCTGACTTTTTGACCTCTTCGATATTTCATGTTTTCCAC
GTAGAACAAGGAACAATGTGGTTGCAATTTTTTTTTTTTTATCCCTGGTC
CGTGTAGTTCGAATTCTCAACGCATGCGCTTCCGAGAACCGTCCAACCTT
CCCCCCCCGACAGCCCACCACCCACCCACCACCCACCCACCACCCACCCA
CCCACCCACCCACCCACCCACCACCTCTAAACGGAACTTATTGAAGCTGC
CTGCGTAGATAACCCTGCCTTGTGCTTCCCATCACCTCTCGCGGCAGCCT
CGGGGCATGCTATTGCGCCGTTTGCGAATTAGTCTACAAGAAGCTTCCGA
GCTCCGAGCGTCATCTGCGCGTTCTTTCCGAGGTCTCCACACCCGAGATG
CATGGCCGAATACCGAACACGCACCAGCAAAGAAAGATTAAAACGCTTAG
ATACCACATGAGACGACACCGCCCGTTCCCCGAATCTCGCGCCTTCTTGC
GGATCTTCTCTTCCACCTAACGTAAATCTCCCCCCCCCCCCCCCCCCCCC
ACCACCACATTTTTGATCCAACACTCAGGCCCTTCGGCAGTCACTGGGTG
CTATGGAAATGCGGATGTCGTTGAATTCTGCGCGTGGCACGAGGCACGGG
AGACGCCCCTCGGGAGATGGCCGTCCCTGCCAAACCACCACCTCGGTAGG
GGACAGTGCTAGCCGGACCATCGGCCTCCCTGTGGGCAGCCCCAACGAGA
CATCGAGTAGGGACGGGGGCAGTGGCAGTGGGCTCAGCGGCCCTTCTTCT
TTCTGGCAGAGCGGCCCTTCTACGGGCGGCCACATGTTCGATGGTCCAAG
CCCATCCGATCCCTTCGGCGAGGGTAGCTTCTTCGCGGAGTCGTCTACGC
CTAGGTCTGCGATCCGAGACTCATGTGCCACTGGGCGCGAGGGCTGCGAT
GATAGCGAACTTATCTTCGATTTCGAGGCGTGAGTGGTGGGCGAGGGTTT
GGGTGG back to topCoding sequence (CDS) from alignment at S-dermatodea_contig8306:3793..5948- >mRNA_S-dermatodea_contig8306.16494.1 ID=mRNA_S-dermatodea_contig8306.16494.1|Name=mRNA_S-dermatodea_contig8306.16494.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=1920bp|location=Sequence derived from alignment at S-dermatodea_contig8306:3793..5948- (Saccorhiza dermatodea SderLu1190fm monoicous)
ATGCCGGATCCAAACAGCACCCGCGCTGGCCACAGCAGGGGCAACGGTGA
TTCCACGGCGTCAAACCCGTTCTTCGATTTATGTTGGCTGCTCGGAGGAA
AGCGCACGAGGACAAGCGATGTGTCGTCTCCAGATAACCGAGGAAGCTGC
CCGGTTCAGATGGGAGGAGGCAAGCGACGGAACTCTCCGCCCGCAACGAA
AGCGGAAGACGTTCTCAGAGTCTGGGATAGCGTGCTCCCACCACCGATCT
GCACGGAGAGCGTCAGGACGGCGCCGATCAGTACCTGCTCCGAGTCCACG
TTGTCGCGCGCCGCGTCCTGGTCGGACACGAACGTGGGGAGCGAGGGAGC
CGGAATAATCGTCTGCGGGAGGCTGCACTCATCATCCGAGGACCATAACC
GGCGCTGTGACGCCGAGGAAGAGCCGCTAACGGTGGTGCAAGGCGTCTGT
GGTGCACAGGGCGTGGCCGTGGGTGCCTCTTTCACTTCTCCGGCGGGGCC
CATCGACATCCCCATTCGGTTGGAGGATGCTGAGCCCGAGAGCGCGCTGC
ATGAGATGCCGGATCCAAACAGCACCCGCGCTGGCCACAGCAGGGGCAAC
GGTGATTCCACGGCGTCAAACCCGTTCTTCGATTTATGTTGGCTGCTCGG
AGGAAAGCGCACGAGGACAAGCGATGTGTCGTCTCCAGATAACCGAGGAA
GCTGCCCGGTTCAGATGGGAGGAGGCAAGCGACGGAACTCTCCGCCCGCA
ACGAAAGCGGAAGACGTTCTCAGAGTCTGGGATAGCGTGCTCCCACCACC
GATCTGCACGGAGAGCGTCAGGACGGCGCCGATCAGTACCTGCTCCGAGT
CCACGTTGTCGCGCGCCGCGTCCTGGTCGGACACGAACGTGGGGAGCGAG
GGAGCCGGAATAATCGTCTGCGGGAGGCTGCACTCATCATCCGAGGACCA
TAACCGGCGCTGTGACGCCGAGGAAGAGCCGCTAACGGTGGTGCAAGGCG
TCTGTGGTGCACAGGGCGTGGCCGTGGGTGCCTCTTTCACTTCTCCGGCG
GGGCCCATCGACATCCCCATTCGGTTGGAGGATGCTGAGCCCGAGAGCGC
GCTGCATGAGGCCCTTCGGCAGTCACTGGGTGCTATGGAAATGCGGATGT
CGTTGAATTCTGCGCGTGGCACGAGGCACGGGAGACGCCCCTCGGGAGAT
GGCCGTCCCTGCCAAACCACCACCTCGGTAGGGGACAGTGCTAGCCGGAC
CATCGGCCTCCCTGTGGGCAGCCCCAACGAGACATCGAGTAGGGACGGGG
GCAGTGGCAGTGGGCTCAGCGGCCCTTCTTCTTTCTGGCAGAGCGGCCCT
TCTACGGGCGGCCACATGTTCGATGGTCCAAGCCCATCCGATCCCTTCGG
CGAGGGTAGCTTCTTCGCGGAGTCGTCTACGCCTAGGTCTGCGATCCGAG
ACTCATGTGCCACTGGGCGCGAGGGCTGCGATGATAGCGAACTTATCTTC
GATTTCGAGGCGTGAGCCCTTCGGCAGTCACTGGGTGCTATGGAAATGCG
GATGTCGTTGAATTCTGCGCGTGGCACGAGGCACGGGAGACGCCCCTCGG
GAGATGGCCGTCCCTGCCAAACCACCACCTCGGTAGGGGACAGTGCTAGC
CGGACCATCGGCCTCCCTGTGGGCAGCCCCAACGAGACATCGAGTAGGGA
CGGGGGCAGTGGCAGTGGGCTCAGCGGCCCTTCTTCTTTCTGGCAGAGCG
GCCCTTCTACGGGCGGCCACATGTTCGATGGTCCAAGCCCATCCGATCCC
TTCGGCGAGGGTAGCTTCTTCGCGGAGTCGTCTACGCCTAGGTCTGCGAT
CCGAGACTCATGTGCCACTGGGCGCGAGGGCTGCGATGATAGCGAACTTA
TCTTCGATTTCGAGGCGTGA back to top
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