mRNA_S-dermatodea_contig8303.16490.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-dermatodea_contig8303.16490.1
Unique NamemRNA_S-dermatodea_contig8303.16490.1
TypemRNA
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Homology
BLAST of mRNA_S-dermatodea_contig8303.16490.1 vs. uniprot
Match: A0A6H5JZY6_9PHAE (Glycerol-3-phosphate dehydrogenase [NAD(+)] n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZY6_9PHAE)

HSP 1 Score: 201 bits (511), Expect = 1.200e-55
Identity = 98/115 (85.22%), Postives = 107/115 (93.04%), Query Frame = 1
Query:    1 RLRCDGS-FDATASSRVFLESCGIGDLMTTCYGNSRNRKCAEMYAREGGKRSWETLEEEELGGMKLQGPSTAVEAYGVIKRRRCAERFPLLTTIYRIAHEGQAAKTIVEFDRVEA 342
            RLRCD S FDATASSR FLESCGIGDLMTTCYG SRNRKCAEM+ARE GKRSWE LE EELGGMKLQGPSTAVEA+GVIK+++CA +FPLLTTIYRIAHEGQ+AKTIVEFD+V+A
Sbjct:  307 RLRCDASSFDATASSRAFLESCGIGDLMTTCYGASRNRKCAEMFARESGKRSWEQLEAEELGGMKLQGPSTAVEAFGVIKKKKCARKFPLLTTIYRIAHEGQSAKTIVEFDKVQA 421          
BLAST of mRNA_S-dermatodea_contig8303.16490.1 vs. uniprot
Match: D7FUR6_ECTSI (Glycerol-3-phosphate dehydrogenase [NAD(+)] n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUR6_ECTSI)

HSP 1 Score: 169 bits (427), Expect = 2.180e-43
Identity = 82/96 (85.42%), Postives = 88/96 (91.67%), Query Frame = 1
Query:    1 RLRCDGS-FDATASSRVFLESCGIGDLMTTCYGNSRNRKCAEMYAREGGKRSWETLEEEELGGMKLQGPSTAVEAYGVIKRRRCAERFPLLTTIYR 285
            RLRCD S FDATASSR FLESCGIGDLMTTCYG SRNRKCAEM+ARE GKRSWE LE EELGGMKLQGPSTAVEA+GVIK+++CA +FPLLTTIYR
Sbjct:  301 RLRCDASAFDATASSRAFLESCGIGDLMTTCYGASRNRKCAEMFARESGKRSWEQLEAEELGGMKLQGPSTAVEAFGVIKKKKCARKFPLLTTIYR 396          
BLAST of mRNA_S-dermatodea_contig8303.16490.1 vs. uniprot
Match: A0A7S1MNI2_ALECA (Glycerol-3-phosphate dehydrogenase (NAD(+)) n=1 Tax=Alexandrium catenella TaxID=2925 RepID=A0A7S1MNI2_ALECA)

HSP 1 Score: 101 bits (251), Expect = 2.070e-21
Identity = 51/101 (50.50%), Postives = 65/101 (64.36%), Query Frame = 1
Query:   22 FDATASSRVFLESCGIGDLMTTCYGNSRNRKCAEMYAREGGKRSWETLEEEELGGMKLQGPSTAVEAYGVIKRRRCAERFPLLTTIYRIAHEGQAAKTIVE 324
            F        FLESCG+ DL+TTC+G  RNRKCAE + R  G +SW+ +E E LGG KLQG  TA E + V+K     ER PL TTIY+IA E +  ++IV+
Sbjct:   63 FHPGVKDNTFLESCGVADLITTCFGG-RNRKCAEAFVRGKGAKSWQEIEGELLGGQKLQGTLTAQEIWPVMKEHGLCERLPLFTTIYQIAFESKPPESIVQ 162          
BLAST of mRNA_S-dermatodea_contig8303.16490.1 vs. uniprot
Match: UPI00052839FB (glycerol-3-phosphate dehydrogenase 1-like protein n=1 Tax=Buceros rhinoceros silvestris TaxID=175836 RepID=UPI00052839FB)

HSP 1 Score: 99.0 bits (245), Expect = 3.290e-21
Identity = 48/107 (44.86%), Postives = 71/107 (66.36%), Query Frame = 1
Query:    1 RLRCDGSFDATASSRVFLESCGIGDLMTTCYGNSRNRKCAEMYAREGGKRSWETLEEEELGGMKLQGPSTAVEAYGVIKRRRCAERFPLLTTIYRIAHEGQAAKTIV 321
            R+ C G      S+  FLESCG+ DL+TTCYG  RNR+ AE + + G  +S E LE+E L G KLQGP T+ E Y +++++R  E+FPL T +Y+I +EG+  + ++
Sbjct:    8 RIFCKGQ----VSTATFLESCGVADLITTCYGG-RNRRVAEAFVKTG--KSIEELEQEMLNGQKLQGPQTSAEVYRILRQKRMLEKFPLFTAVYQICYEGKPVREMI 107          
BLAST of mRNA_S-dermatodea_contig8303.16490.1 vs. uniprot
Match: A0A7L3WJV9_9GRUI (Glycerol-3-phosphate dehydrogenase (NAD(+)) (Fragment) n=1 Tax=Atlantisia rogersi TaxID=2478892 RepID=A0A7L3WJV9_9GRUI)

HSP 1 Score: 100 bits (250), Expect = 4.070e-21
Identity = 50/95 (52.63%), Postives = 66/95 (69.47%), Query Frame = 1
Query:   37 SSRVFLESCGIGDLMTTCYGNSRNRKCAEMYAREGGKRSWETLEEEELGGMKLQGPSTAVEAYGVIKRRRCAERFPLLTTIYRIAHEGQAAKTIV 321
            S   FLESCG+ DL+TTCYG  RNRK AE +AR G  +S E LE E L G KLQGP T+ E Y ++K++   ++FPL TTIY+I +EGQ+ +  +
Sbjct:   82 SIATFLESCGVADLITTCYGG-RNRKVAEAFARTG--KSIEELENEMLNGQKLQGPQTSAEVYKILKQKNLFDKFPLFTTIYKICYEGQSIQDFI 173          
BLAST of mRNA_S-dermatodea_contig8303.16490.1 vs. uniprot
Match: A0A2V3IWC7_9FLOR (Glycerol-3-phosphate dehydrogenase [NAD(+)] n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IWC7_9FLOR)

HSP 1 Score: 105 bits (262), Expect = 4.730e-21
Identity = 51/94 (54.26%), Postives = 65/94 (69.15%), Query Frame = 1
Query:   46 VFLESCGIGDLMTTCYGNSRNRKCAEMYAREGGKRSWETLEEEELGGMKLQGPSTAVEAYGVIKRRRCAERFPLLTTIYRIAHEGQAAKTIVEF 327
              +ESCG+ DL+TTC G  RNR+ +E +AR GGKRSWE LE+E L G KLQG ST +E   ++KR  C   FP +  IY+IA+EG A  TIV+F
Sbjct:  281 AMVESCGLADLITTCMGG-RNRRVSEAFARAGGKRSWEELEDEMLKGQKLQGTSTVLEVMKILKRDNCLNEFPFIKLIYQIAYEGAAIPTIVDF 373          
BLAST of mRNA_S-dermatodea_contig8303.16490.1 vs. uniprot
Match: A0A4D9DAN2_9STRA (Glycerol-3-phosphate dehydrogenase [NAD(+)] n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DAN2_9STRA)

HSP 1 Score: 104 bits (260), Expect = 5.030e-21
Identity = 46/93 (49.46%), Postives = 67/93 (72.04%), Query Frame = 1
Query:   46 VFLESCGIGDLMTTCYGNSRNRKCAEMYAREGGKRSWETLEEEELGGMKLQGPSTAVEAYGVIKRRRCAERFPLLTTIYRIAHEGQAAKTIVE 324
             F ESCG+ DL+TTCYG  RNRKCAE +AR GG   W+ +E+EELGG  LQGP T  + + V+++++   RFPL  ++Y+IA++G+   T+V+
Sbjct:  254 TFFESCGVADLITTCYGG-RNRKCAETFARAGGAMGWDEIEKEELGGQHLQGPQTTSKLHKVLEQKKWLSRFPLFRSVYQIAYQGRPPATLVQ 345          
BLAST of mRNA_S-dermatodea_contig8303.16490.1 vs. uniprot
Match: W7U0Y7_9STRA (Glycerol-3-phosphate dehydrogenase [NAD(+)] n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U0Y7_9STRA)

HSP 1 Score: 105 bits (261), Expect = 7.660e-21
Identity = 46/93 (49.46%), Postives = 68/93 (73.12%), Query Frame = 1
Query:   46 VFLESCGIGDLMTTCYGNSRNRKCAEMYAREGGKRSWETLEEEELGGMKLQGPSTAVEAYGVIKRRRCAERFPLLTTIYRIAHEGQAAKTIVE 324
             F ESCG+ DL+TTCYG  RNRKCAE +AR GG  +W+ +E+EELGG  LQGP T  + + V+++++   RFPL  ++Y+IA++G+   T+V+
Sbjct:  309 TFFESCGVADLITTCYGG-RNRKCAETFARAGGTMAWDEIEKEELGGQHLQGPQTTSKLHKVLEQKKWLSRFPLFRSVYQIAYQGRPPATLVQ 400          
BLAST of mRNA_S-dermatodea_contig8303.16490.1 vs. uniprot
Match: A0A7L1MXQ1_RHICY (Glycerol-3-phosphate dehydrogenase [NAD(+)] (Fragment) n=1 Tax=Rhinopomastus cyanomelas TaxID=113115 RepID=A0A7L1MXQ1_RHICY)

HSP 1 Score: 103 bits (257), Expect = 1.280e-20
Identity = 53/107 (49.53%), Postives = 72/107 (67.29%), Query Frame = 1
Query:    1 RLRCDGSFDATASSRVFLESCGIGDLMTTCYGNSRNRKCAEMYAREGGKRSWETLEEEELGGMKLQGPSTAVEAYGVIKRRRCAERFPLLTTIYRIAHEGQAAKTIV 321
            ++ C GS     S   FLESCG+ DL+TTCYG  RNR+ AE +AR G  +S ETLE+E L G KLQGP T+ E Y ++K++    +FPL TTIY+I +EGQ+ +  +
Sbjct:  240 KMFCRGS----VSIATFLESCGVADLITTCYGG-RNRRVAEAFARTG--KSIETLEKEILNGQKLQGPQTSAEVYKILKQKNVLHKFPLFTTIYKICYEGQSVQDFI 339          
BLAST of mRNA_S-dermatodea_contig8303.16490.1 vs. uniprot
Match: A0A7L3FI93_9GRUI (Glycerol-3-phosphate dehydrogenase [NAD(+)] (Fragment) n=3 Tax=Neognathae TaxID=8825 RepID=A0A7L3FI93_9GRUI)

HSP 1 Score: 100 bits (250), Expect = 1.320e-20
Identity = 50/95 (52.63%), Postives = 66/95 (69.47%), Query Frame = 1
Query:   37 SSRVFLESCGIGDLMTTCYGNSRNRKCAEMYAREGGKRSWETLEEEELGGMKLQGPSTAVEAYGVIKRRRCAERFPLLTTIYRIAHEGQAAKTIV 321
            S   FLESCG+ DL+TTCYG  RNRK AE +AR G  +S E LE E L G KLQGP T+ E Y ++K++   ++FPL TTIY+I +EGQ+ +  +
Sbjct:  132 SIATFLESCGVADLITTCYGG-RNRKVAEAFARTG--KSIEELENEMLNGQKLQGPQTSAEVYRILKQKNLFDKFPLFTTIYKICYEGQSIQDFI 223          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig8303.16490.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JZY6_9PHAE1.200e-5585.22Glycerol-3-phosphate dehydrogenase [NAD(+)] n=1 Ta... [more]
D7FUR6_ECTSI2.180e-4385.42Glycerol-3-phosphate dehydrogenase [NAD(+)] n=1 Ta... [more]
A0A7S1MNI2_ALECA2.070e-2150.50Glycerol-3-phosphate dehydrogenase (NAD(+)) n=1 Ta... [more]
UPI00052839FB3.290e-2144.86glycerol-3-phosphate dehydrogenase 1-like protein ... [more]
A0A7L3WJV9_9GRUI4.070e-2152.63Glycerol-3-phosphate dehydrogenase (NAD(+)) (Fragm... [more]
A0A2V3IWC7_9FLOR4.730e-2154.26Glycerol-3-phosphate dehydrogenase [NAD(+)] n=1 Ta... [more]
A0A4D9DAN2_9STRA5.030e-2149.46Glycerol-3-phosphate dehydrogenase [NAD(+)] n=1 Ta... [more]
W7U0Y7_9STRA7.660e-2149.46Glycerol-3-phosphate dehydrogenase [NAD(+)] n=1 Ta... [more]
A0A7L1MXQ1_RHICY1.280e-2049.53Glycerol-3-phosphate dehydrogenase [NAD(+)] (Fragm... [more]
A0A7L3FI93_9GRUI1.320e-2052.63Glycerol-3-phosphate dehydrogenase [NAD(+)] (Fragm... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig8303contigS-dermatodea_contig8303:5284..8782 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeViridiplantae
Seed ortholog score85.5
Seed ortholog evalue1.4e-14
Seed eggNOG ortholog3218.PP1S99_87V6.1
KEGG rclassRC00029
KEGG koko:K00006
KEGG ReactionR00842
KEGG Pathwayko00564,ko01110,ko04011,map00564,map01110,map04011
EggNOG free text desc.Glycerol-3-phosphate dehydrogenase (NAD
EggNOG OGs37HV9@33090,3G7PR@35493,COG0240@1,KOG2711@2759
EC1.1.1.8
COG Functional cat.C
Best tax levelStreptophyta
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Hectar predicted targeting categoryother localisation
Exons3
Model size1529
Cds size267
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig8303.16490.1prot_S-dermatodea_contig8303.16490.1Saccorhiza dermatodea SderLu1190fm monoicouspolypeptideS-dermatodea_contig8303 6468..8704 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622925334.5717587-UTR-S-dermatodea_contig8303:5283..64671622925334.5717587-UTR-S-dermatodea_contig8303:5283..6467Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig8303 5284..6467 -
1694079862.9612098-UTR-S-dermatodea_contig8303:5283..64671694079862.9612098-UTR-S-dermatodea_contig8303:5283..6467Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig8303 5284..6467 -
1622925334.6170912-UTR-S-dermatodea_contig8303:8704..87821622925334.6170912-UTR-S-dermatodea_contig8303:8704..8782Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig8303 8705..8782 -
1694079863.01681-UTR-S-dermatodea_contig8303:8704..87821694079863.01681-UTR-S-dermatodea_contig8303:8704..8782Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig8303 8705..8782 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622925334.5835664-CDS-S-dermatodea_contig8303:6467..65281622925334.5835664-CDS-S-dermatodea_contig8303:6467..6528Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8303 6468..6528 -
1694079862.9791343-CDS-S-dermatodea_contig8303:6467..65281694079862.9791343-CDS-S-dermatodea_contig8303:6467..6528Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8303 6468..6528 -
1622925334.5949466-CDS-S-dermatodea_contig8303:7352..75231622925334.5949466-CDS-S-dermatodea_contig8303:7352..7523Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8303 7353..7523 -
1694079862.989582-CDS-S-dermatodea_contig8303:7352..75231694079862.989582-CDS-S-dermatodea_contig8303:7352..7523Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8303 7353..7523 -
1622925334.60605-CDS-S-dermatodea_contig8303:8669..87041622925334.60605-CDS-S-dermatodea_contig8303:8669..8704Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8303 8670..8704 -
1694079862.9997034-CDS-S-dermatodea_contig8303:8669..87041694079862.9997034-CDS-S-dermatodea_contig8303:8669..8704Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8303 8670..8704 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-dermatodea_contig8303.16490.1

>prot_S-dermatodea_contig8303.16490.1 ID=prot_S-dermatodea_contig8303.16490.1|Name=mRNA_S-dermatodea_contig8303.16490.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=89bp
MTTCYGNSRNRKCAEMYAREGGKRSWETLEEEELGGMKLQGPSTAVEAYG
VIKRRRCAERFPLLTTIYRIAHEGQAAKTIVEFDRVEA*
back to top

mRNA from alignment at S-dermatodea_contig8303:5284..8782-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-dermatodea_contig8303.16490.1 ID=mRNA_S-dermatodea_contig8303.16490.1|Name=mRNA_S-dermatodea_contig8303.16490.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=3499bp|location=Sequence derived from alignment at S-dermatodea_contig8303:5284..8782- (Saccorhiza dermatodea SderLu1190fm monoicous)
AGACTGAGGTGCGATGGAAGCTTCGACGCCACCGCCTCCTCCAGGGTGTT CCTAGAGAGCTGCGGGATCGGGGACCTCATGACTACGTGCTACGGGAACA GCCGCAACAGAAAGTAAGAAGAGAAGATTAGCGTGATACTATGATACATA CATCCCTTTTTGAAGCAAACCTTCGGGCCCCCAGCGCTCGCTGCATGCTT TGAAAATAACTATAATAGTATTGTAGGTATGATAGCCACGGCTACGCCAG TGAGGTGTGCGTCTTCTCTAAAATTAAGTAGTGATGGCTTCACGACTTGG CATCAAGAATTGTGGTATAGCATTTCAGGTTCAGAATCGTATAGGATTTT AGATTTATTGTTCCCTCTAAATTTAAATCGCTATTTTCAAAAAAACAAAA TCAAAGCGGTATGATTAATATACTGTAGATAATTTATTATTTTTCATTCA CGAGAGGTGCACCACTTTGCAGATATTTTTTTCAGTGTCACATAAACTTA TGAGTGGCAGTCCTTAGACCGACACGCCATGGCGAGGGTACCTGGATATC TGGCCATGGGAAGACGTTTGCCGTACCCAATCGACAGCCATCTTCATTGT AGTCTACAGTACAGCGATAGTACAGACAGTAGGATAACATCTAATATAAT AGCATCATAGATAACGTGGACCACCACTGATTTAGCTTGGGCCACCTTTC TCCTATACGAAAAGATGGAACTCAATACCCTCTCTGTGTTTTTTAAAATG TTCTCGTTTCATCCGGAGGGGGGGGGGGGCACAGGCAAGGCACATGTAAC CACAGAAGATGTCAAGTCGGCGATCAACATTTTCAGAAAAACAAACCGCA CATGCATACCATACCATACCCTGTGCCAGTTTGTGGTAAATCCCGCACTC CTAGGTCATCTCTTGAGGTGGTATGACACGCACCAACTATATATATGTCG TGCATGGAGATGTGATGTGCACAATTAATATTAGTACTTGTACTTGTCGC TGTTAAAAATAGGATTGTAAATATTAATAGGTACAAATGGACCCCCCCCC CCCCTGAAATTGCGAAAACACAACAGACTCCGACAAATGTTTTTTTTTAA AGCGAATCCTCACCCCCCCCACCCCCACCCCCACCCCACCCCCACCCCCA CCCCCACCCCCACCCCCACCCCAACCCCACCCCAACCCCACCCCCCCACC ACCCCCCTCACCTACCAACCCACCCATACCTCCCCAAACCCCGGTAAACA AAAACAAAGGTGTGCGGAGATGTACGCTCGCGAGGGAGGGAAGCGATCGT GGGAGACGTTGGAGGAGGAGGAGCTCGGAGGCATGAAGCTCCAGGGACCC AGCACGGCGGTCGAGGCCTACGGTGTCATCAAGCGCCGGAGGTGTGCGGA ACGTTTCCCGCTGCTCACCACGATTTATCGGTAAGCGAGTGGAGGAATAG GCGGGCAGGACGGGGGGGGGGGGGGCGTACTCATGTTTTTCATGCCTTAG CTGTTAGACCATTGACCACGCGTCTGTCCTCGAGAGGACGGAGCTTTGTT CCCACAAGGTCGAACCCCNNNNNNNNNNCGGTAAGCGAGTGGAGGAATAG GCGGGCAGGACGGGGGGGGGGGGGGGGGTCATTATGTTTTGTATGCCTTC GGGTATAGACAATTGCCACCGCCGCTGTCCCCGGACGGGGGGGCAGTTTT TCCAACAGGTAAGATCGCCCATGGCCAATCGTTCCTTCCTACCTTGCCAA AGGTGGCGCAAAAAATTTGTTCCTATCCTGTCTACATCACATACCGGCTT CGCAGGCCACTTCTTATCCCCCAGGGGGTTCACATCATTGCATGACATGA AACCATGAGCATCATACGCAACGGAAGCCTTCCTCTAGGTGTAGCTTGAA CCATCTTCCTTCTTCGTGAAACGCAGCCTGGCTGGCGAAAATCCGGCATA TCACTTGGTCCTAGCATTGATGGGACGCGCGGTATATGGTGTCCGTCTAG ATACATACGACATGCGTTTAACATAAGTACAACCCCCCCCCCCCCCCCCC CCCCCCCCCCCCCCCCACCCCCCCCCCCCTCTCCTTGGTCTTTTTTTTCC CCAACCTCNNNNNNNNNNATTTTAAGGGGCGGGGGTGTTATGGTGGCCCC ACAAAAAAACCCCCCACCGTTTTAACAAAACCACCCCCCCCCCCCCCCCC CCCCTCCCCCCCCGCCACTGCCTCCCGACTCTCTTGCGGTTGATTTTCCG ACAGAATCGCCCATGAAGGCCAGGCCGCGAAGACTATCGTGGAGTTCGAC AGAGTGGAGGCGTGAAAGCGTGGGAGAGCGCGGGGCAGGTGGTTTGTCGT CTCTCTAGAGCTTGATCTTTGCAGTAGGAGCGGACGGGCGAGATATGTAG CGCGGGTTTCACTACAACAAAGCCACAGATAGCACAGCCGAAGGAGAATT TTTAAGGCCTTCTATATACGGCAGTTATGTATAATAGTAGTCTATTAGTA ATAATTTGGTCTGATGAGAGGCGTAGCTATAATAGCTCTATCACAGGAGA TTTGTCTTCATGTAGCTCTGTTTAGGTGATGTAGGTTATTGCTGTTTGTT TATTTGTGCTGGTGGCCCAGTGGCGGCACTTAGGAGAGGGACGATCGAGA CACAAGACGCCATTCATCGCCGTGAGAACTATGTGTTGGAAGGATTGTGC TACGAGTGCTTATAGTGATGCGAGGGGGCAATTGTTGGGTGTTGTCCGAA TCGAGCTTTCATCGGTGCCCCTCCTACTCGGGTCGCTGGATAGCATGGTG TGTTTTTGTTTTGTTTTGTTGAGTAACAAGTGTGGAGCGATTTTTGTTTT ATTTTTTATTTTACCAGGTAGCCAACTCTCCTTTGCGTTTATTTTAACGC CCGTGTGTACGGGGTACTAATTGTAACGGCGACACGTCATTATGGTCCAT ACCCCCCCCTTTCCGCCGTTTTGCTTGCCCCCGAAGATTACTTTTTTACA TAATGTGCTATCTGTTAGTATGCAAAGGTTGAAAGTTGCACGTCGATCGA CAAAACAACGCACACACAACACACGTGTCCAGACCCGTCAGTCACATGGG CCGTGATTAGAGCGACAAAAATAGCTTTTTCATACTCTCTCGAGAGAAAG AGATTTTTGAGTCAAGCAAGCCCTCTTGCTTTCCCTTCCTTCGGGTTTCT ATAAAGTTGTTGCTTCAAAACCCAAACCCTCCCACAGTGTGACCGTGCTG TTGGTGTTGGTGTTGGTGTCATCATCGTAGGCAACGAGCTTTAGTGAAGG GAGTCAGGATGCCCGTTTTTTTGTAGCATCTATTATCAGTGTACACTGTA GTGCTGTTGCCCCCGAAGTTAGCGTTTTTGGTTATGGAAAACCGGTGCCT TTTGCCAAGCCGGGGGCTTTATTAAGAGGAGACTCGACGGGCGAGGGCTG AAGAGCCAGGGGATCTCGAGTAGCACTGCGAGCATTTTAGCCAGTGGGA
back to top

Coding sequence (CDS) from alignment at S-dermatodea_contig8303:5284..8782-

>mRNA_S-dermatodea_contig8303.16490.1 ID=mRNA_S-dermatodea_contig8303.16490.1|Name=mRNA_S-dermatodea_contig8303.16490.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=534bp|location=Sequence derived from alignment at S-dermatodea_contig8303:5284..8782- (Saccorhiza dermatodea SderLu1190fm monoicous)
ATGACTACGTGCTACGGGAACAGCCGCAACAGAAAATGACTACGTGCTAC
GGGAACAGCCGCAACAGAAAGTGTGCGGAGATGTACGCTCGCGAGGGAGG
GAAGCGATCGTGGGAGACGTTGGAGGAGGAGGAGCTCGGAGGCATGAAGC
TCCAGGGACCCAGCACGGCGGTCGAGGCCTACGGTGTCATCAAGCGCCGG
AGGTGTGCGGAACGTTTCCCGCTGCTCACCACGATTTATCGGTGTGCGGA
GATGTACGCTCGCGAGGGAGGGAAGCGATCGTGGGAGACGTTGGAGGAGG
AGGAGCTCGGAGGCATGAAGCTCCAGGGACCCAGCACGGCGGTCGAGGCC
TACGGTGTCATCAAGCGCCGGAGGTGTGCGGAACGTTTCCCGCTGCTCAC
CACGATTTATCGAATCGCCCATGAAGGCCAGGCCGCGAAGACTATCGTGG
AGTTCGACAGAGTGGAGGCGTGAAATCGCCCATGAAGGCCAGGCCGCGAA
GACTATCGTGGAGTTCGACAGAGTGGAGGCGTGA
back to top