mRNA_S-dermatodea_contig8303.16490.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
|
Overview
Homology
BLAST of mRNA_S-dermatodea_contig8303.16490.1 vs. uniprot
Match: A0A6H5JZY6_9PHAE (Glycerol-3-phosphate dehydrogenase [NAD(+)] n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZY6_9PHAE) HSP 1 Score: 201 bits (511), Expect = 1.200e-55 Identity = 98/115 (85.22%), Postives = 107/115 (93.04%), Query Frame = 1
Query: 1 RLRCDGS-FDATASSRVFLESCGIGDLMTTCYGNSRNRKCAEMYAREGGKRSWETLEEEELGGMKLQGPSTAVEAYGVIKRRRCAERFPLLTTIYRIAHEGQAAKTIVEFDRVEA 342
RLRCD S FDATASSR FLESCGIGDLMTTCYG SRNRKCAEM+ARE GKRSWE LE EELGGMKLQGPSTAVEA+GVIK+++CA +FPLLTTIYRIAHEGQ+AKTIVEFD+V+A
Sbjct: 307 RLRCDASSFDATASSRAFLESCGIGDLMTTCYGASRNRKCAEMFARESGKRSWEQLEAEELGGMKLQGPSTAVEAFGVIKKKKCARKFPLLTTIYRIAHEGQSAKTIVEFDKVQA 421
BLAST of mRNA_S-dermatodea_contig8303.16490.1 vs. uniprot
Match: D7FUR6_ECTSI (Glycerol-3-phosphate dehydrogenase [NAD(+)] n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUR6_ECTSI) HSP 1 Score: 169 bits (427), Expect = 2.180e-43 Identity = 82/96 (85.42%), Postives = 88/96 (91.67%), Query Frame = 1
Query: 1 RLRCDGS-FDATASSRVFLESCGIGDLMTTCYGNSRNRKCAEMYAREGGKRSWETLEEEELGGMKLQGPSTAVEAYGVIKRRRCAERFPLLTTIYR 285
RLRCD S FDATASSR FLESCGIGDLMTTCYG SRNRKCAEM+ARE GKRSWE LE EELGGMKLQGPSTAVEA+GVIK+++CA +FPLLTTIYR
Sbjct: 301 RLRCDASAFDATASSRAFLESCGIGDLMTTCYGASRNRKCAEMFARESGKRSWEQLEAEELGGMKLQGPSTAVEAFGVIKKKKCARKFPLLTTIYR 396
BLAST of mRNA_S-dermatodea_contig8303.16490.1 vs. uniprot
Match: A0A7S1MNI2_ALECA (Glycerol-3-phosphate dehydrogenase (NAD(+)) n=1 Tax=Alexandrium catenella TaxID=2925 RepID=A0A7S1MNI2_ALECA) HSP 1 Score: 101 bits (251), Expect = 2.070e-21 Identity = 51/101 (50.50%), Postives = 65/101 (64.36%), Query Frame = 1
Query: 22 FDATASSRVFLESCGIGDLMTTCYGNSRNRKCAEMYAREGGKRSWETLEEEELGGMKLQGPSTAVEAYGVIKRRRCAERFPLLTTIYRIAHEGQAAKTIVE 324
F FLESCG+ DL+TTC+G RNRKCAE + R G +SW+ +E E LGG KLQG TA E + V+K ER PL TTIY+IA E + ++IV+
Sbjct: 63 FHPGVKDNTFLESCGVADLITTCFGG-RNRKCAEAFVRGKGAKSWQEIEGELLGGQKLQGTLTAQEIWPVMKEHGLCERLPLFTTIYQIAFESKPPESIVQ 162
BLAST of mRNA_S-dermatodea_contig8303.16490.1 vs. uniprot
Match: UPI00052839FB (glycerol-3-phosphate dehydrogenase 1-like protein n=1 Tax=Buceros rhinoceros silvestris TaxID=175836 RepID=UPI00052839FB) HSP 1 Score: 99.0 bits (245), Expect = 3.290e-21 Identity = 48/107 (44.86%), Postives = 71/107 (66.36%), Query Frame = 1
Query: 1 RLRCDGSFDATASSRVFLESCGIGDLMTTCYGNSRNRKCAEMYAREGGKRSWETLEEEELGGMKLQGPSTAVEAYGVIKRRRCAERFPLLTTIYRIAHEGQAAKTIV 321
R+ C G S+ FLESCG+ DL+TTCYG RNR+ AE + + G +S E LE+E L G KLQGP T+ E Y +++++R E+FPL T +Y+I +EG+ + ++
Sbjct: 8 RIFCKGQ----VSTATFLESCGVADLITTCYGG-RNRRVAEAFVKTG--KSIEELEQEMLNGQKLQGPQTSAEVYRILRQKRMLEKFPLFTAVYQICYEGKPVREMI 107
BLAST of mRNA_S-dermatodea_contig8303.16490.1 vs. uniprot
Match: A0A7L3WJV9_9GRUI (Glycerol-3-phosphate dehydrogenase (NAD(+)) (Fragment) n=1 Tax=Atlantisia rogersi TaxID=2478892 RepID=A0A7L3WJV9_9GRUI) HSP 1 Score: 100 bits (250), Expect = 4.070e-21 Identity = 50/95 (52.63%), Postives = 66/95 (69.47%), Query Frame = 1
Query: 37 SSRVFLESCGIGDLMTTCYGNSRNRKCAEMYAREGGKRSWETLEEEELGGMKLQGPSTAVEAYGVIKRRRCAERFPLLTTIYRIAHEGQAAKTIV 321
S FLESCG+ DL+TTCYG RNRK AE +AR G +S E LE E L G KLQGP T+ E Y ++K++ ++FPL TTIY+I +EGQ+ + +
Sbjct: 82 SIATFLESCGVADLITTCYGG-RNRKVAEAFARTG--KSIEELENEMLNGQKLQGPQTSAEVYKILKQKNLFDKFPLFTTIYKICYEGQSIQDFI 173
BLAST of mRNA_S-dermatodea_contig8303.16490.1 vs. uniprot
Match: A0A2V3IWC7_9FLOR (Glycerol-3-phosphate dehydrogenase [NAD(+)] n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IWC7_9FLOR) HSP 1 Score: 105 bits (262), Expect = 4.730e-21 Identity = 51/94 (54.26%), Postives = 65/94 (69.15%), Query Frame = 1
Query: 46 VFLESCGIGDLMTTCYGNSRNRKCAEMYAREGGKRSWETLEEEELGGMKLQGPSTAVEAYGVIKRRRCAERFPLLTTIYRIAHEGQAAKTIVEF 327
+ESCG+ DL+TTC G RNR+ +E +AR GGKRSWE LE+E L G KLQG ST +E ++KR C FP + IY+IA+EG A TIV+F
Sbjct: 281 AMVESCGLADLITTCMGG-RNRRVSEAFARAGGKRSWEELEDEMLKGQKLQGTSTVLEVMKILKRDNCLNEFPFIKLIYQIAYEGAAIPTIVDF 373
BLAST of mRNA_S-dermatodea_contig8303.16490.1 vs. uniprot
Match: A0A4D9DAN2_9STRA (Glycerol-3-phosphate dehydrogenase [NAD(+)] n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DAN2_9STRA) HSP 1 Score: 104 bits (260), Expect = 5.030e-21 Identity = 46/93 (49.46%), Postives = 67/93 (72.04%), Query Frame = 1
Query: 46 VFLESCGIGDLMTTCYGNSRNRKCAEMYAREGGKRSWETLEEEELGGMKLQGPSTAVEAYGVIKRRRCAERFPLLTTIYRIAHEGQAAKTIVE 324
F ESCG+ DL+TTCYG RNRKCAE +AR GG W+ +E+EELGG LQGP T + + V+++++ RFPL ++Y+IA++G+ T+V+
Sbjct: 254 TFFESCGVADLITTCYGG-RNRKCAETFARAGGAMGWDEIEKEELGGQHLQGPQTTSKLHKVLEQKKWLSRFPLFRSVYQIAYQGRPPATLVQ 345
BLAST of mRNA_S-dermatodea_contig8303.16490.1 vs. uniprot
Match: W7U0Y7_9STRA (Glycerol-3-phosphate dehydrogenase [NAD(+)] n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U0Y7_9STRA) HSP 1 Score: 105 bits (261), Expect = 7.660e-21 Identity = 46/93 (49.46%), Postives = 68/93 (73.12%), Query Frame = 1
Query: 46 VFLESCGIGDLMTTCYGNSRNRKCAEMYAREGGKRSWETLEEEELGGMKLQGPSTAVEAYGVIKRRRCAERFPLLTTIYRIAHEGQAAKTIVE 324
F ESCG+ DL+TTCYG RNRKCAE +AR GG +W+ +E+EELGG LQGP T + + V+++++ RFPL ++Y+IA++G+ T+V+
Sbjct: 309 TFFESCGVADLITTCYGG-RNRKCAETFARAGGTMAWDEIEKEELGGQHLQGPQTTSKLHKVLEQKKWLSRFPLFRSVYQIAYQGRPPATLVQ 400
BLAST of mRNA_S-dermatodea_contig8303.16490.1 vs. uniprot
Match: A0A7L1MXQ1_RHICY (Glycerol-3-phosphate dehydrogenase [NAD(+)] (Fragment) n=1 Tax=Rhinopomastus cyanomelas TaxID=113115 RepID=A0A7L1MXQ1_RHICY) HSP 1 Score: 103 bits (257), Expect = 1.280e-20 Identity = 53/107 (49.53%), Postives = 72/107 (67.29%), Query Frame = 1
Query: 1 RLRCDGSFDATASSRVFLESCGIGDLMTTCYGNSRNRKCAEMYAREGGKRSWETLEEEELGGMKLQGPSTAVEAYGVIKRRRCAERFPLLTTIYRIAHEGQAAKTIV 321
++ C GS S FLESCG+ DL+TTCYG RNR+ AE +AR G +S ETLE+E L G KLQGP T+ E Y ++K++ +FPL TTIY+I +EGQ+ + +
Sbjct: 240 KMFCRGS----VSIATFLESCGVADLITTCYGG-RNRRVAEAFARTG--KSIETLEKEILNGQKLQGPQTSAEVYKILKQKNVLHKFPLFTTIYKICYEGQSVQDFI 339
BLAST of mRNA_S-dermatodea_contig8303.16490.1 vs. uniprot
Match: A0A7L3FI93_9GRUI (Glycerol-3-phosphate dehydrogenase [NAD(+)] (Fragment) n=3 Tax=Neognathae TaxID=8825 RepID=A0A7L3FI93_9GRUI) HSP 1 Score: 100 bits (250), Expect = 1.320e-20 Identity = 50/95 (52.63%), Postives = 66/95 (69.47%), Query Frame = 1
Query: 37 SSRVFLESCGIGDLMTTCYGNSRNRKCAEMYAREGGKRSWETLEEEELGGMKLQGPSTAVEAYGVIKRRRCAERFPLLTTIYRIAHEGQAAKTIV 321
S FLESCG+ DL+TTCYG RNRK AE +AR G +S E LE E L G KLQGP T+ E Y ++K++ ++FPL TTIY+I +EGQ+ + +
Sbjct: 132 SIATFLESCGVADLITTCYGG-RNRKVAEAFARTG--KSIEELENEMLNGQKLQGPQTSAEVYRILKQKNLFDKFPLFTTIYKICYEGQSIQDFI 223 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig8303.16490.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig8303.16490.1 >prot_S-dermatodea_contig8303.16490.1 ID=prot_S-dermatodea_contig8303.16490.1|Name=mRNA_S-dermatodea_contig8303.16490.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=89bp MTTCYGNSRNRKCAEMYAREGGKRSWETLEEEELGGMKLQGPSTAVEAYGback to top mRNA from alignment at S-dermatodea_contig8303:5284..8782- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig8303.16490.1 ID=mRNA_S-dermatodea_contig8303.16490.1|Name=mRNA_S-dermatodea_contig8303.16490.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=3499bp|location=Sequence derived from alignment at S-dermatodea_contig8303:5284..8782- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig8303:5284..8782- >mRNA_S-dermatodea_contig8303.16490.1 ID=mRNA_S-dermatodea_contig8303.16490.1|Name=mRNA_S-dermatodea_contig8303.16490.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=534bp|location=Sequence derived from alignment at S-dermatodea_contig8303:5284..8782- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |