prot_S-dermatodea_contig83.16485.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig83.16485.1
Unique Nameprot_S-dermatodea_contig83.16485.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length225
Homology
BLAST of mRNA_S-dermatodea_contig83.16485.1 vs. uniprot
Match: D7FR96_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FR96_ECTSI)

HSP 1 Score: 217 bits (553), Expect = 8.770e-68
Identity = 106/174 (60.92%), Postives = 125/174 (71.84%), Query Frame = 0
Query:   52 PKRDSAVSRHVVPTSGRCMFSAQEGQDGRAQDMDS--KVKPGAVPKAKLEIHAKTPQEMEDAGAFFGTDSRGGDVVLLWGDLGTGKTCFARGFVRARVGDPDLAVTSPSYLLDNIYEVGDEDVTIHHMDLYRLRGGCDLHVLDIPRVLEASVCLIEWPDRLGAAQPMDRLGENV 223
            P+R             + M S Q+G+ G  + M +  KV  G    A LE+   +P+EME+ GAFFG D+ GGDVVLLWGDLGTGKTCFARGFVRARVGDP LAVTSPSYLLDN YEV DED+T+HHMDLYRL+GG DL VL IP V E  VCL+EWPDRLGA QP++RL  ++
Sbjct:   33 PRRGDISLFKTTAQRDKHMASIQDGRGGHTRGMTAMPKVDGGVACTATLEVSVASPEEMEETGAFFGADASGGDVVLLWGDLGTGKTCFARGFVRARVGDPGLAVTSPSYLLDNTYEVADEDLTLHHMDLYRLQGGTDLRVLGIPGVFETCVCLVEWPDRLGATQPVNRLDVHL 206          
BLAST of mRNA_S-dermatodea_contig83.16485.1 vs. uniprot
Match: A0A835Z1V9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1V9_9STRA)

HSP 1 Score: 154 bits (388), Expect = 1.090e-42
Identity = 90/219 (41.10%), Postives = 116/219 (52.97%), Query Frame = 0
Query:    6 CTTYLNRSGGILSLLFGWCGLWVAPVATLSCR-HTSFRTTAGRVWVGPKRDSAVSRHVVPTSGRCMFSAQEGQDGRAQDMDSKVKPGAVPKAKLEIHAKTPQEMEDAGAFFGTDSRGGDVVLLWGDLGTGKTCFARGFVRARVGDPDLAVTSPSYLLDNIYEVGDEDVTIHHMDLYRLRGGCDLHVLDIPRVLEASVCLIEWPDRLGAAQPMDRLGENV 223
            CTT ++RS  +             P+  + CR H   R++  R+   P          +  S   +FSA+     R+   DS       P     +  ++P+ ME  G      +  GDV+LL GDLGTGKTCF+RGF+R    DPDL VTSPSYLLDN YE  D  + +HHMDLYRL G  DLHVL+IP +L  SVCL+EWPDRL    P  RL   +
Sbjct:   29 CTTKVSRSSTL------------PPILCIRCRQHQKQRSSFHRLSKRPVLG-------LDWSSTLLFSAETS---RSYCTDSTTGQDQPPTYTSSLMIRSPESMEQLGQLLARGAEAGDVILLIGDLGTGKTCFSRGFIRECAEDPDLLVTSPSYLLDNTYEATDGTM-VHHMDLYRLSGADDLHVLNIPEILSTSVCLVEWPDRLQHLTPSVRLEVRI 224          
BLAST of mRNA_S-dermatodea_contig83.16485.1 vs. uniprot
Match: A0A7S2GEU5_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GEU5_9STRA)

HSP 1 Score: 147 bits (370), Expect = 1.110e-40
Identity = 70/120 (58.33%), Postives = 82/120 (68.33%), Query Frame = 0
Query:  104 TPQEMEDAGAFFGTDSRGGDVVLLWGDLGTGKTCFARGFVRARVGDPDLAVTSPSYLLDNIYEVGDEDVTIHHMDLYRLRGGCDLHVLDIPRVLEASVCLIEWPDRLGAAQPMDRLGENV 223
            TP++ME  GA     S  GD++ L GDLG GKTCFARGFV+ARVGDP L VTSPSYLLD  YEV DED+ IHHMDLYRL G      LD+       +CL+EWPDRLG   P +RL  ++
Sbjct:   51 TPEDMERFGATLARGSTAGDIIFLTGDLGAGKTCFARGFVKARVGDPYLRVTSPSYLLDQSYEVEDEDLIIHHMDLYRLSGTIGTVPLDLETKFRQCICLLEWPDRLGTDIPEERLEVSI 170          
BLAST of mRNA_S-dermatodea_contig83.16485.1 vs. uniprot
Match: A0A7S2EJ05_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EJ05_TRICV)

HSP 1 Score: 141 bits (355), Expect = 1.360e-38
Identity = 67/122 (54.92%), Postives = 81/122 (66.39%), Query Frame = 0
Query:   98 LEIHAKTPQEMEDAGAFFGTDSRGGDVVLLWGDLGTGKTCFARGFVRARVGDPDLAVTSPSYLLDNIYEVGDEDVTIHHMDLYRLRGGCDLHVLDIPRVLEASVCLIEWPDRLGAAQPMDRL 219
            L +   TP++MED GA     + GGDV+LL GDLG GKTC +RGFVRAR G   + VTSP+YLL N Y       TI+HMDLYRL+GG DL  LD+ + L   +CLIEWP RLG + P  RL
Sbjct:    4 LTLSVPTPEDMEDVGAVLSVGTSGGDVILLGGDLGAGKTCLSRGFVRARTGMEGMRVTSPTYLLSNSYPADGGRTTIYHMDLYRLKGGEDLEPLDMAKTLTDGICLIEWPSRLGESLPPARL 125          
BLAST of mRNA_S-dermatodea_contig83.16485.1 vs. uniprot
Match: A0A7S4SUD7_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4SUD7_9STRA)

HSP 1 Score: 140 bits (353), Expect = 2.280e-36
Identity = 69/127 (54.33%), Postives = 84/127 (66.14%), Query Frame = 0
Query:   98 LEIHAKTPQEMEDAGAFFGTDSRGGDVVLLWGDLGTGKTCFARGFVRARVGDPDLAVTSPSYLLDNIYEVGDEDVTIHHMDLYRLRGGC-DLHVLDIPRVLEASVCLIEWPDRLGAAQPMDRLGENV 223
            L++   T ++MED GA     ++GGD +LL GDLG GKTCF+RGFVRAR G  DL VTSP+YLL N YE  D +  IHHMDLYRL G   DL  LD+  VL   + LIEWP RLG + P +RL   +
Sbjct:  187 LQLSIPTSEDMEDVGAIISMGTKGGDTILLDGDLGAGKTCFSRGFVRARTGYIDLRVTSPTYLLSNTYEADDGNTIIHHMDLYRLSGNKEDLEPLDMEHVLTKCISLIEWPSRLGDSAPPERLEVTI 313          
BLAST of mRNA_S-dermatodea_contig83.16485.1 vs. uniprot
Match: K0S9V1_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0S9V1_THAOC)

HSP 1 Score: 134 bits (336), Expect = 5.050e-35
Identity = 71/130 (54.62%), Postives = 87/130 (66.92%), Query Frame = 0
Query:   91 GAVPKAKLEIHAKTPQEMEDAGAFFGTDSRGGDVVLLWGDLGTGKTCFARGFVRARVGDPDLAVTSPSYLLDNIYEVGDEDVTIHHMDLYRLRG-GCDLHVLDIPRVLEASVCLIEWPDRLGAAQPMDRL 219
            GA  +  LE+   TP++MED G     +S  GDV+LL GDLG GKTCF+RGFVRA+ G PD  VTSP+YLL N Y V D ++ ++HMDLYRL G G DL  LD+  V E  + LIEWP RL A +P  RL
Sbjct:   67 GASDRYSLELTIPTPEDMEDIGGLLSVNSLPGDVILLDGDLGAGKTCFSRGFVRAKTGLPDERVTSPTYLLSNAYSV-DSNLKVYHMDLYRLSGNGDDLAPLDLENVFENGISLIEWPSRL-ATKPETRL 194          
BLAST of mRNA_S-dermatodea_contig83.16485.1 vs. uniprot
Match: A0A7S2XNM5_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XNM5_9STRA)

HSP 1 Score: 133 bits (334), Expect = 1.460e-34
Identity = 66/116 (56.90%), Postives = 78/116 (67.24%), Query Frame = 0
Query:  104 TPQEMEDAGAFFGTDSRGGDVVLLWGDLGTGKTCFARGFVRARVGDPDLAVTSPSYLLDNIYEVGDEDVTIHHMDLYRLRGGCDLHVLDIPRVLEASVCLIEWPDRLGAAQPMDRL 219
            TP++MED GA     +  GD +LL GDLG GKTC ARGFVRAR G  D++VTSP+YLL N YE  D  + IHHMDLYRL G  DL  L++  VL   + LIEWP RLG+  P  RL
Sbjct:   94 TPEDMEDLGAVLSMGTGPGDSILLKGDLGAGKTCLARGFVRARTGMADISVTSPTYLLSNTYEADDGALLIHHMDLYRLSGDKDLEPLNMNYVLSNCLSLIEWPSRLGSLTPTVRL 209          
BLAST of mRNA_S-dermatodea_contig83.16485.1 vs. uniprot
Match: A0A7S2LPC8_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2LPC8_9STRA)

HSP 1 Score: 122 bits (307), Expect = 1.690e-30
Identity = 61/121 (50.41%), Postives = 77/121 (63.64%), Query Frame = 0
Query:   98 LEIHAKTPQEMEDAGAFFGTDSRGGDVVLLWGDLGTGKTCFARGFVRARVGDPDLAVTSPSYLLDNIYEVGDEDVTIHHMDLYRLRGGC--DLHVLDIPRVLEASVCLIEWPDRLGAAQPM 216
            L +  ++P+ ME  GA    DS  GDV+ L GDLG GKTCF+RGFVR RV  P L VTSP++LL N Y    ++V +HHMDLYRL      +L  LD+PRV+E  + +IEWP RL     M
Sbjct:  105 LHVKIESPEIMESLGAALAKDSVPGDVIFLDGDLGAGKTCFSRGFVRERVQRPRLRVTSPTFLLSNTYFCPQDEVEVHHMDLYRLFTNSKEELEPLDLPRVMEECISIIEWPSRLACYSDM 225          
BLAST of mRNA_S-dermatodea_contig83.16485.1 vs. uniprot
Match: B8C2L2_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C2L2_THAPS)

HSP 1 Score: 118 bits (295), Expect = 1.280e-27
Identity = 60/123 (48.78%), Postives = 75/123 (60.98%), Query Frame = 0
Query:   98 LEIHAKTPQEMEDAGAFFGTDSRGGDVVLLWGDLGTGKTCFARGFVRARVGDPDLAVTSPSYLLDNIYEVGDEDVTIHHMDLYRLRGGC-DLHVLDIPRVLEASVCLIEWPDRLGAAQPMDRL 219
            L++   T ++MED G      S+ GD++LL GDLG GKTCF+RGF+R R G  D  VTSP+YLL N Y V      ++HMDLYRL G   DL  LD+  V    + LIEWP RL   +P  RL
Sbjct:  246 LKLCVPTAEDMEDIGGLLSVGSKKGDIILLDGDLGAGKTCFSRGFIRGRTGMEDERVTSPTYLLSNSYSVDGGKTKVYHMDLYRLSGSANDLLPLDLENVFTNGISLIEWPSRLNV-KPETRL 367          
BLAST of mRNA_S-dermatodea_contig83.16485.1 vs. uniprot
Match: A0A7S3M7Y0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M7Y0_9STRA)

HSP 1 Score: 108 bits (271), Expect = 1.390e-26
Identity = 50/90 (55.56%), Postives = 67/90 (74.44%), Query Frame = 0
Query:  122 GDVVLLWGDLGTGKTCFARGFVRARVGDPDLAVTSPSYLLDNIYEVGDEDVTIHHMDLYRLRGG-CDLHVLDIPRVLEASVCLIEWPDRL 210
            GDV+LL GDLG GKT  +RG ++A+  DP + VTSPSYLLDN Y  G+ D  IHHMDLYRL  G  ++ +L IP + ++++CL+EWP+RL
Sbjct:   17 GDVLLLQGDLGAGKTTLSRGIIQAKFRDPSMVVTSPSYLLDNTYRYGENDY-IHHMDLYRLPVGYTEMGILGIPSIFDSALCLVEWPNRL 105          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig83.16485.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FR96_ECTSI8.770e-6860.92Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835Z1V9_9STRA1.090e-4241.10Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2GEU5_9STRA1.110e-4058.33Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S2EJ05_TRICV1.360e-3854.92Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
A0A7S4SUD7_9STRA2.280e-3654.33Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
K0S9V1_THAOC5.050e-3554.62Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]
A0A7S2XNM5_9STRA1.460e-3456.90Hypothetical protein n=1 Tax=Attheya septentrional... [more]
A0A7S2LPC8_9STRA1.690e-3050.41Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
B8C2L2_THAPS1.280e-2748.78Uncharacterized protein n=1 Tax=Thalassiosira pseu... [more]
A0A7S3M7Y0_9STRA1.390e-2655.56Hypothetical protein (Fragment) n=1 Tax=Spumella e... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003442tRNA threonylcarbamoyl adenosine modification protein TsaEPFAMPF02367TsaEcoord: 104..215
e-value: 2.9E-24
score: 85.4
IPR003442tRNA threonylcarbamoyl adenosine modification protein TsaETIGRFAMTIGR00150TIGR00150coord: 106..210
e-value: 3.2E-18
score: 63.9
NoneNo IPR availableGENE3D3.40.50.300coord: 95..222
e-value: 1.3E-25
score: 91.7
NoneNo IPR availablePANTHERPTHR33540FAMILY NOT NAMEDcoord: 96..219
NoneNo IPR availablePANTHERPTHR33540:SF2TRNA THREONYLCARBAMOYLADENOSINE BIOSYNTHESIS PROTEIN TSAEcoord: 96..219
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 15..34
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..14
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 35..224
NoneNo IPR availableTMHMMTMhelixcoord: 13..35
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 120..212

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig83contigS-dermatodea_contig83:41811..43317 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig83.16485.1mRNA_S-dermatodea_contig83.16485.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig83 41811..43317 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig83.16485.1 ID=prot_S-dermatodea_contig83.16485.1|Name=mRNA_S-dermatodea_contig83.16485.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=225bp
MHVRPCTTYLNRSGGILSLLFGWCGLWVAPVATLSCRHTSFRTTAGRVWV
GPKRDSAVSRHVVPTSGRCMFSAQEGQDGRAQDMDSKVKPGAVPKAKLEI
HAKTPQEMEDAGAFFGTDSRGGDVVLLWGDLGTGKTCFARGFVRARVGDP
DLAVTSPSYLLDNIYEVGDEDVTIHHMDLYRLRGGCDLHVLDIPRVLEAS
VCLIEWPDRLGAAQPMDRLGENVL*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003442T6A_TsaE
IPR027417P-loop_NTPase