prot_S-dermatodea_contig8294.16481.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_S-dermatodea_contig8294.16481.1
Unique Name	prot_S-dermatodea_contig8294.16481.1
Type	polypeptide
Organism	Saccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length	106

Homology

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BLAST of mRNA_S-dermatodea_contig8294.16481.1 vs. uniprot
Match: D8LE22_ECTSI (Probable glycine-sarcosine methyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LE22_ECTSI)

HSP 1 Score: 114 bits (286), Expect = 3.680e-29
Identity = 56/105 (53.33%), Postives = 74/105 (70.48%), Query Frame = 0

Query:    1 MKSDTAELGDLEEVFKHRRIKGIASPGLYRGWADDYGLEFVEFHDKTSDFAEHYSSILAQIASLRGTIEGVSDEHLDWMTTRYGAWVAAANNKVVTTGEVVMKKN 105
            M+SD A+   L EV++H  I  +ASPGLY  W + YGLE VEF D+TS+F+ HY  ++  IASLRGTI+GV DE LD MT+RYG+W  AA   V+  G +V+KK+
Sbjct:  163 MQSDDADPTKLGEVYQHIGISRLASPGLYEEWGNAYGLEPVEFDDRTSNFSVHYQHLVDVIASLRGTIKGVDDEFLDRMTSRYGSWCVAAEFDVLRWGVIVLKKS 267

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BLAST of mRNA_S-dermatodea_contig8294.16481.1 vs. uniprot
Match: A0A6H5KF52_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF52_9PHAE)

HSP 1 Score: 105 bits (263), Expect = 1.380e-26
Identity = 50/92 (54.35%), Postives = 64/92 (69.57%), Query Frame = 0

Query:   14 VFKHRRIKGIASPGLYRGWADDYGLEFVEFHDKTSDFAEHYSSILAQIASLRGTIEGVSDEHLDWMTTRYGAWVAAANNKVVTTGEVVMKKN 105
            V++H  I  +ASPGLY  W   YGLE VEF D+TS+F+ HY  ++  IASLRGTI+GV DE LD MT+RYG+W  AA   V+  G +V KK+
Sbjct:   69 VYQHIGISRLASPGLYEEWGKAYGLEHVEFDDRTSNFSVHYQHLVDVIASLRGTIKGVDDEFLDRMTSRYGSWCVAAEFDVLRWGVIVFKKS 160

The following BLAST results are available for this feature:

BLAST of mRNA_S-dermatodea_contig8294.16481.1 vs. uniprot

BLAST of mRNA_S-dermatodea_contig8294.16481.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D8LE22_ECTSI	3.680e-29	53.33	Probable glycine-sarcosine methyltransferase n=1 T...	[more]
A0A6H5KF52_9PHAE	1.380e-26	54.35	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.40.50.150		coord: 1..105 e-value: 9.3E-9 score: 36.8

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
S-dermatodea_contig8294	contig	S-dermatodea_contig8294:6364..7313 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_S-dermatodea_contig8294.16481.1	mRNA_S-dermatodea_contig8294.16481.1	Saccorhiza dermatodea SderLu1190fm monoicous	mRNA	S-dermatodea_contig8294 5575..7323 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_S-dermatodea_contig8294.16481.1 ID=prot_S-dermatodea_contig8294.16481.1|Name=mRNA_S-dermatodea_contig8294.16481.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=106bp
MKSDTAELGDLEEVFKHRRIKGIASPGLYRGWADDYGLEFVEFHDKTSDF
AEHYSSILAQIASLRGTIEGVSDEHLDWMTTRYGAWVAAANNKVVTTGEV
VMKKN*